RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 BSCL2Q96G97 398 aaPredicted RBP6.64□□□□□ -1.35
ITGB1-217ENST00000494395 OR4C12Q96R67 309 aa6.64□□□□□ -1.35
ITGB1-217ENST00000494395 CHRDL1Q9BU40 450 aa6.64□□□□□ -1.35
ITGB1-217ENST00000494395 CCDC32Q9BV29 185 aa6.64□□□□□ -1.35
ITGB1-217ENST00000494395 BATF3Q9NR55 127 aa6.64□□□□□ -1.35
ITGB1-217ENST00000494395 C21orf62Q9NYP8 219 aa6.64□□□□□ -1.35
ITGB1-217ENST00000494395 PEMTQ9UBM1 199 aa6.64□□□□□ -1.35
ITGB1-217ENST00000494395 HSPB7Q9UBY9 170 aa6.64□□□□□ -1.35
ITGB1-217ENST00000494395 A0A1B0GU03 582 aa6.63□□□□□ -1.35
ITGB1-217ENST00000494395 LINC00854A0A1B0GVQ3 168 aa6.63□□□□□ -1.35
ITGB1-217ENST00000494395 C9orf170A2RU37 121 aa6.63□□□□□ -1.35
ITGB1-217ENST00000494395 OR2T8A6NH00 312 aa6.63□□□□□ -1.35
ITGB1-217ENST00000494395 LYRM1O43325 122 aa6.63□□□□□ -1.35
ITGB1-217ENST00000494395 LY86O95711 162 aa6.63□□□□□ -1.35
ITGB1-217ENST00000494395 MT-CO2P00403 227 aa6.63□□□□□ -1.35
ITGB1-217ENST00000494395 CTSGP08311 255 aa6.63□□□□□ -1.35
ITGB1-217ENST00000494395 SULT1A3P0DMM9 295 aa6.63□□□□□ -1.35
ITGB1-217ENST00000494395 SULT1A4P0DMN0 295 aa6.63□□□□□ -1.35
ITGB1-217ENST00000494395 SLC25A6P12236 298 aa6.63□□□□□ -1.35
ITGB1-217ENST00000494395 GP9P14770 177 aa6.63□□□□□ -1.35
ITGB1-217ENST00000494395 HOXA1P49639 335 aaPredicted RBP6.63□□□□□ -1.35
ITGB1-217ENST00000494395 TNFRSF9Q07011 255 aa6.63□□□□□ -1.35
ITGB1-217ENST00000494395 SMCO1Q147U7 214 aa6.63□□□□□ -1.35
ITGB1-217ENST00000494395 TATDN3Q17R31 274 aa6.63□□□□□ -1.35
ITGB1-217ENST00000494395 SPSB3Q6PJ21 355 aa6.63□□□□□ -1.35
ITGB1-217ENST00000494395 TMEM170AQ8WVE7 144 aa6.63□□□□□ -1.35
ITGB1-217ENST00000494395 S100ZQ8WXG8 99 aa6.63□□□□□ -1.35
ITGB1-217ENST00000494395 PDCD10Q9BUL8 212 aa6.63□□□□□ -1.35
ITGB1-217ENST00000494395 FNDC4Q9H6D8 234 aaPredicted RBP6.63□□□□□ -1.35
ITGB1-217ENST00000494395 ZC4H2Q9NQZ6 224 aa6.63□□□□□ -1.35
ITGB1-217ENST00000494395 TBC1D24Q9ULP9 559 aa6.63□□□□□ -1.35
ITGB1-217ENST00000494395 TGP01266 2768 aa6.62□□□□□ -1.35
ITGB1-217ENST00000494395 PIGBOS1A0A0B4J2F0 54 aa6.62□□□□□ -1.35
ITGB1-217ENST00000494395 IGHV3-35A0A0C4DH35 117 aa6.62□□□□□ -1.35
ITGB1-217ENST00000494395 IZUMO1RA6ND01 250 aa6.62□□□□□ -1.35
ITGB1-217ENST00000494395 CENPXA8MT69 81 aa6.62□□□□□ -1.35
ITGB1-217ENST00000494395 OR4E1P0C645 316 aa6.62□□□□□ -1.35
ITGB1-217ENST00000494395 C8orf88P0DMB2 117 aa6.62□□□□□ -1.35
ITGB1-217ENST00000494395 FOLR2P14207 255 aa6.62□□□□□ -1.35
ITGB1-217ENST00000494395 MFAP4P55083 255 aa6.62□□□□□ -1.35
ITGB1-217ENST00000494395 DHRS2Q13268 280 aa6.62□□□□□ -1.35
ITGB1-217ENST00000494395 FAM106AQ4KMX7 169 aa6.62□□□□□ -1.35
ITGB1-217ENST00000494395 C2orf83Q53S99 150 aa6.62□□□□□ -1.35
ITGB1-217ENST00000494395 PLET1Q6UQ28 207 aa6.62□□□□□ -1.35
ITGB1-217ENST00000494395 LYG2Q86SG7 212 aa6.62□□□□□ -1.35
ITGB1-217ENST00000494395 OR2K2Q8NGT1 345 aa6.62□□□□□ -1.35
ITGB1-217ENST00000494395 TMEM190Q8WZ59 177 aa6.62□□□□□ -1.35
ITGB1-217ENST00000494395 TXN2Q99757 166 aa6.62□□□□□ -1.35
ITGB1-217ENST00000494395 SPATA25Q9BR10 227 aa6.62□□□□□ -1.35
ITGB1-217ENST00000494395 MRPL36Q9P0J6 103 aaKnown RBP6.62□□□□□ -1.35
ITGB1-217ENST00000494395 CACFD1Q9UGQ2 172 aa6.62□□□□□ -1.35
ITGB1-217ENST00000494395 CORTO00230 105 aa6.61□□□□□ -1.35
ITGB1-217ENST00000494395 NDUFA4O00483 81 aa6.61□□□□□ -1.35
ITGB1-217ENST00000494395 NXPH3O95157 252 aa6.61□□□□□ -1.35
ITGB1-217ENST00000494395 IGHV3-48P01763 117 aa6.61□□□□□ -1.35
ITGB1-217ENST00000494395 TCRBP04435 133 aa6.61□□□□□ -1.35
ITGB1-217ENST00000494395 ANXA7P20073 488 aaKnown RBP6.61□□□□□ -1.35
ITGB1-217ENST00000494395 CBLN1P23435 193 aa6.61□□□□□ -1.35
ITGB1-217ENST00000494395 SNCAP37840 140 aa6.61□□□□□ -1.35
ITGB1-217ENST00000494395 HTR2BP41595 481 aa6.61□□□□□ -1.35
ITGB1-217ENST00000494395 ELLP55199 621 aaPredicted RBP6.61□□□□□ -1.35
ITGB1-217ENST00000494395 IFITM3Q01628 133 aa6.61□□□□□ -1.35
ITGB1-217ENST00000494395 ASAH1Q13510 395 aa6.61□□□□□ -1.35
ITGB1-217ENST00000494395 DEFB114Q30KQ6 69 aa6.61□□□□□ -1.35
ITGB1-217ENST00000494395 CD300EQ496F6 205 aaPredicted RBP6.61□□□□□ -1.35
ITGB1-217ENST00000494395 GGNBP1Q5YKI7 109 aa6.61□□□□□ -1.35
ITGB1-217ENST00000494395 CACNG8Q8WXS5 425 aa6.61□□□□□ -1.35
ITGB1-217ENST00000494395 PINX1Q96BK5 328 aaKnown RBP6.61□□□□□ -1.35
ITGB1-217ENST00000494395 B9D2Q9BPU9 175 aa6.61□□□□□ -1.35
ITGB1-217ENST00000494395 WDR12Q9GZL7 423 aaKnown RBP6.61□□□□□ -1.35
ITGB1-217ENST00000494395 C20orf85Q9H1P6 137 aa6.61□□□□□ -1.35
ITGB1-217ENST00000494395 RBKSQ9H477 322 aa6.61□□□□□ -1.35
ITGB1-217ENST00000494395 ENY2Q9NPA8 101 aa6.61□□□□□ -1.35
ITGB1-217ENST00000494395 GAR1Q9NY12 217 aaKnown RBP6.61□□□□□ -1.35
ITGB1-217ENST00000494395 MLXQ9UH92 298 aa6.61□□□□□ -1.35
ITGB1-217ENST00000494395 TMED3Q9Y3Q3 217 aa6.61□□□□□ -1.35
ITGB1-217ENST00000494395 ZNF785A8K8V0 405 aa6.6□□□□□ -1.35
ITGB1-217ENST00000494395 CEBPZOSA8MTT3 80 aa6.6□□□□□ -1.35
ITGB1-217ENST00000494395 MPTX1A8MV57 137 aa6.6□□□□□ -1.35
ITGB1-217ENST00000494395 FAM90A26D6RGX4 464 aa6.6□□□□□ -1.35
ITGB1-217ENST00000494395 ADAP1O75689 374 aa6.6□□□□□ -1.35
ITGB1-217ENST00000494395 UPK1BO75841 260 aa6.6□□□□□ -1.35
ITGB1-217ENST00000494395 HOXB5P09067 269 aa6.6□□□□□ -1.35
ITGB1-217ENST00000494395 NPY1RP25929 384 aa6.6□□□□□ -1.35
ITGB1-217ENST00000494395 SUB1P53999 127 aaKnown RBP eCLIP6.6□□□□□ -1.35
ITGB1-217ENST00000494395 DCTN2Q13561 401 aaKnown RBP6.6□□□□□ -1.35
ITGB1-217ENST00000494395 ZNF846Q147U1 533 aa6.6□□□□□ -1.35
ITGB1-217ENST00000494395 Q56UQ5 140 aa6.6□□□□□ -1.35
ITGB1-217ENST00000494395 LCN12Q6JVE5 192 aa6.6□□□□□ -1.35
ITGB1-217ENST00000494395 UBAC2Q8NBM4 344 aa6.6□□□□□ -1.35
ITGB1-217ENST00000494395 UXS1Q8NBZ7 420 aa6.6□□□□□ -1.35
ITGB1-217ENST00000494395 SLC24A4Q8NFF2 622 aa6.6□□□□□ -1.35
ITGB1-217ENST00000494395 OR4X1Q8NH49 305 aa6.6□□□□□ -1.35
ITGB1-217ENST00000494395 DTD1Q8TEA8 209 aa6.6□□□□□ -1.35
ITGB1-217ENST00000494395 OR10C1Q96KK4 312 aa6.6□□□□□ -1.35
ITGB1-217ENST00000494395 PALMDQ9NP74 551 aa6.6□□□□□ -1.35
ITGB1-217ENST00000494395 HEYLQ9NQ87 328 aaPredicted RBP6.6□□□□□ -1.35
ITGB1-217ENST00000494395 TECRQ9NZ01 308 aaKnown RBP6.6□□□□□ -1.35
ITGB1-217ENST00000494395 COL7A1Q02388 2944 aa6.6□□□□□ -1.35
ITGB1-217ENST00000494395 DNAH9Q9NYC9 4486 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms