RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 DMXL1Q9Y485 3027 aa2.93□□□□□ -1.94
SMC2-205ENST00000493955 CBR1P16152 277 aa2.93□□□□□ -1.94
SMC2-205ENST00000493955 GABRA4P48169 554 aa2.93□□□□□ -1.94
SMC2-205ENST00000493955 AESQ08117 197 aa2.93□□□□□ -1.94
SMC2-205ENST00000493955 FOXF1Q12946 379 aa2.93□□□□□ -1.94
SMC2-205ENST00000493955 GLT6D1Q7Z4J2 308 aa2.93□□□□□ -1.94
SMC2-205ENST00000493955 C1orf158Q8N1D5 194 aa2.93□□□□□ -1.94
SMC2-205ENST00000493955 TMEM86BQ8N661 226 aa2.93□□□□□ -1.94
SMC2-205ENST00000493955 OR13C8Q8NGS7 320 aa2.93□□□□□ -1.94
SMC2-205ENST00000493955 LHFPL5Q8TAF8 219 aa2.93□□□□□ -1.94
SMC2-205ENST00000493955 VPS29Q9UBQ0 182 aa2.93□□□□□ -1.94
SMC2-205ENST00000493955 GINS2Q9Y248 185 aa2.93□□□□□ -1.94
SMC2-205ENST00000493955 KIAA1549LQ6ZVL6 1849 aa2.93□□□□□ -1.94
SMC2-205ENST00000493955 FAM186AA6NE01 2351 aa2.93□□□□□ -1.94
SMC2-205ENST00000493955 VPS13AQ96RL7 3174 aa2.92□□□□□ -1.94
SMC2-205ENST00000493955 ANK1P16157 1881 aa2.92□□□□□ -1.94
SMC2-205ENST00000493955 MDFIC2A0A1B0GVS7 189 aa2.92□□□□□ -1.94
SMC2-205ENST00000493955 EEF1E1-BLOC1S5C9J1V9 151 aa2.92□□□□□ -1.94
SMC2-205ENST00000493955 XCL1P47992 114 aa2.92□□□□□ -1.94
SMC2-205ENST00000493955 LSM6P62312 80 aaKnown RBP2.92□□□□□ -1.94
SMC2-205ENST00000493955 TNFAIP8L3Q5GJ75 292 aa2.92□□□□□ -1.94
SMC2-205ENST00000493955 SMCR5Q8TEV8 140 aa2.92□□□□□ -1.94
SMC2-205ENST00000493955 PECRQ9BY49 303 aa2.92□□□□□ -1.94
SMC2-205ENST00000493955 TAAR3PQ9P1P4 343 aa2.92□□□□□ -1.94
SMC2-205ENST00000493955 CCL26Q9Y258 94 aa2.92□□□□□ -1.94
SMC2-205ENST00000493955 ANGPT4Q9Y264 503 aa2.92□□□□□ -1.94
SMC2-205ENST00000493955 GREB1Q4ZG55 1949 aa2.92□□□□□ -1.94
SMC2-205ENST00000493955 SPTBN4Q9H254 2564 aa2.92□□□□□ -1.94
SMC2-205ENST00000493955 KMT2BQ9UMN6 2715 aaPredicted RBP2.91□□□□□ -1.94
SMC2-205ENST00000493955 DMDP11532 3685 aa2.91□□□□□ -1.94
SMC2-205ENST00000493955 ARHGAP32A7KAX9 2087 aa2.91□□□□□ -1.94
SMC2-205ENST00000493955 OBSL1O75147 1896 aa2.91□□□□□ -1.94
SMC2-205ENST00000493955 A0A1W2PQL4 384 aaPredicted RBP2.91□□□□□ -1.94
SMC2-205ENST00000493955 TMEM210A6NLX4 147 aa2.91□□□□□ -1.94
SMC2-205ENST00000493955 TRAPPC3O43617 180 aa2.91□□□□□ -1.94
SMC2-205ENST00000493955 NPYP01303 97 aa2.91□□□□□ -1.94
SMC2-205ENST00000493955 TCRBP04435 133 aa2.91□□□□□ -1.94
SMC2-205ENST00000493955 ALOX5APP20292 161 aa2.91□□□□□ -1.94
SMC2-205ENST00000493955 CD24P25063 80 aa2.91□□□□□ -1.94
SMC2-205ENST00000493955 FUSP35637 526 aaKnown RBP eCLIP2.91□□□□□ -1.94
SMC2-205ENST00000493955 MRPS15P82914 257 aaKnown RBP2.91□□□□□ -1.94
SMC2-205ENST00000493955 MEF2BQ02080 365 aaPredicted RBP2.91□□□□□ -1.94
SMC2-205ENST00000493955 CAV1Q03135 178 aa2.91□□□□□ -1.94
SMC2-205ENST00000493955 SPOPLQ6IQ16 392 aa2.91□□□□□ -1.94
SMC2-205ENST00000493955 ALKAL1Q6UXT8 129 aa2.91□□□□□ -1.94
SMC2-205ENST00000493955 ANKRD7Q92527 254 aa2.91□□□□□ -1.94
SMC2-205ENST00000493955 FGF13Q92913 245 aa2.91□□□□□ -1.94
SMC2-205ENST00000493955 PRELID1Q9Y255 219 aa2.91□□□□□ -1.94
SMC2-205ENST00000493955 NYNRINQ9P2P1 1898 aaKnown RBP2.9□□□□□ -1.94
SMC2-205ENST00000493955 CACNA1AO00555 2505 aa2.9□□□□□ -1.95
SMC2-205ENST00000493955 TSC2P49815 1807 aa2.9□□□□□ -1.95
SMC2-205ENST00000493955 OTOGLQ3ZCN5 2332 aa2.9□□□□□ -1.95
SMC2-205ENST00000493955 A0A1W2PQD3 144 aa2.9□□□□□ -1.95
SMC2-205ENST00000493955 C11orf86A6NJI1 115 aa2.9□□□□□ -1.95
SMC2-205ENST00000493955 INMT-MINDY4F8WBC2 141 aa2.9□□□□□ -1.95
SMC2-205ENST00000493955 C3orf84H3BNL1 204 aa2.9□□□□□ -1.95
SMC2-205ENST00000493955 LST1O00453 97 aa2.9□□□□□ -1.95
SMC2-205ENST00000493955 KPNA3O00505 521 aaPredicted RBP2.9□□□□□ -1.95
SMC2-205ENST00000493955 TAS2R20P59543 309 aa2.9□□□□□ -1.95
SMC2-205ENST00000493955 STX5Q13190 355 aa2.9□□□□□ -1.95
SMC2-205ENST00000493955 ZNF471Q9BX82 626 aaPredicted RBP2.9□□□□□ -1.95
SMC2-205ENST00000493955 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.9□□□□□ -1.95
SMC2-205ENST00000493955 SLC22A13Q9Y226 551 aa2.9□□□□□ -1.95
SMC2-205ENST00000493955 FAM215AQ9Y5M1 114 aa2.9□□□□□ -1.95
SMC2-205ENST00000493955 GVINP1Q7Z2Y8 2422 aa2.9□□□□□ -1.95
SMC2-205ENST00000493955 ZFHX2Q9C0A1 2572 aaPredicted RBP2.9□□□□□ -1.95
SMC2-205ENST00000493955 NUP210Q8TEM1 1887 aaPredicted RBP2.9□□□□□ -1.95
SMC2-205ENST00000493955 PTPRZ1P23471 2315 aaPredicted RBP2.89□□□□□ -1.95
SMC2-205ENST00000493955 CACNA1BQ00975 2339 aa2.89□□□□□ -1.95
SMC2-205ENST00000493955 DENND4CQ5VZ89 1909 aa2.89□□□□□ -1.95
SMC2-205ENST00000493955 CLDN24A6NM45 220 aa2.89□□□□□ -1.95
SMC2-205ENST00000493955 A8MUN3 132 aa2.89□□□□□ -1.95
SMC2-205ENST00000493955 TMEM114B3SHH9 223 aa2.89□□□□□ -1.95
SMC2-205ENST00000493955 TXNDC9O14530 226 aa2.89□□□□□ -1.95
SMC2-205ENST00000493955 GNRH2O43555 120 aa2.89□□□□□ -1.95
SMC2-205ENST00000493955 CD79AP11912 226 aa2.89□□□□□ -1.95
SMC2-205ENST00000493955 MAP1BP46821 2468 aaKnown RBP2.89□□□□□ -1.95
SMC2-205ENST00000493955 IDH3GP51553 393 aaPredicted RBP2.89□□□□□ -1.95
SMC2-205ENST00000493955 FXYD7P58549 80 aa2.89□□□□□ -1.95
SMC2-205ENST00000493955 AP3S2P59780 193 aa2.89□□□□□ -1.95
SMC2-205ENST00000493955 IFITM2Q01629 132 aa2.89□□□□□ -1.95
SMC2-205ENST00000493955 DNAH14Q0VDD8 3507 aa2.89□□□□□ -1.95
SMC2-205ENST00000493955 CLDN22Q8N7P3 220 aa2.89□□□□□ -1.95
SMC2-205ENST00000493955 OR1L8Q8NGR8 309 aa2.89□□□□□ -1.95
SMC2-205ENST00000493955 OR2T4Q8NH00 348 aa2.89□□□□□ -1.95
SMC2-205ENST00000493955 CNBD2Q96M20 576 aa2.89□□□□□ -1.95
SMC2-205ENST00000493955 OR52E6Q96RD3 313 aa2.89□□□□□ -1.95
SMC2-205ENST00000493955 TNRC6BQ9UPQ9 1833 aaKnown RBP2.89□□□□□ -1.95
SMC2-205ENST00000493955 PTPRDP23468 1912 aa2.89□□□□□ -1.95
SMC2-205ENST00000493955 RIF1Q5UIP0 2472 aaKnown RBP2.89□□□□□ -1.95
SMC2-205ENST00000493955 PLA2G10O15496 165 aa2.88□□□□□ -1.95
SMC2-205ENST00000493955 CTXN2P0C2S0 81 aa2.88□□□□□ -1.95
SMC2-205ENST00000493955 ZNF728P0DKX0 622 aa2.88□□□□□ -1.95
SMC2-205ENST00000493955 FGF6P10767 208 aa2.88□□□□□ -1.95
SMC2-205ENST00000493955 KCNE1P15382 129 aa2.88□□□□□ -1.95
SMC2-205ENST00000493955 POLR2GP62487 172 aaKnown RBP eCLIP2.88□□□□□ -1.95
SMC2-205ENST00000493955 RANP62826 216 aaKnown RBP2.88□□□□□ -1.95
SMC2-205ENST00000493955 ZNF767PQ75MW2 155 aa2.88□□□□□ -1.95
SMC2-205ENST00000493955 LRRC25Q8N386 305 aaPredicted RBP2.88□□□□□ -1.95
SMC2-205ENST00000493955 ROPN1LQ96C74 230 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms