RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 SAP30O75446 220 aa6.56□□□□□ -1.36
BRCA1-221ENST00000493795 SAA2P0DJI9 122 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-221ENST00000493795 UTF1Q5T230 341 aa6.56□□□□□ -1.36
BRCA1-221ENST00000493795 NEGR1Q7Z3B1 354 aa6.56□□□□□ -1.36
BRCA1-221ENST00000493795 C18orf12Q96KH6 178 aa6.56□□□□□ -1.36
BRCA1-221ENST00000493795 RTBDNQ9BSG5 229 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-221ENST00000493795 RPRMLQ8N4K4 120 aa6.56□□□□□ -1.36
BRCA1-221ENST00000493795 FAM181AQ8N9Y4 354 aa6.56□□□□□ -1.36
BRCA1-221ENST00000493795 HIST1H2BLQ99880 126 aa6.56□□□□□ -1.36
BRCA1-221ENST00000493795 C4AP0C0L4 1744 aa6.55□□□□□ -1.36
BRCA1-221ENST00000493795 C4BP0C0L5 1744 aa6.55□□□□□ -1.36
BRCA1-221ENST00000493795 IGHG3P01860 377 aa6.55□□□□□ -1.36
BRCA1-221ENST00000493795 OR9G9P0C7N8 305 aa6.55□□□□□ -1.36
BRCA1-221ENST00000493795 FOXL2P58012 376 aa6.55□□□□□ -1.36
BRCA1-221ENST00000493795 ACTL10Q5JWF8 245 aa6.55□□□□□ -1.36
BRCA1-221ENST00000493795 TEX38Q6PEX7 206 aa6.55□□□□□ -1.36
BRCA1-221ENST00000493795 OCC1Q8TAD7 63 aa6.55□□□□□ -1.36
BRCA1-221ENST00000493795 SLC25A39Q9BZJ4 359 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-221ENST00000493795 SPANXCQ9NY87 97 aa6.55□□□□□ -1.36
BRCA1-221ENST00000493795 PILRAQ9UKJ1 303 aa6.55□□□□□ -1.36
BRCA1-221ENST00000493795 MMP23AO75900 390 aa6.55□□□□□ -1.36
BRCA1-221ENST00000493795 BSPH1Q075Z2 132 aa6.55□□□□□ -1.36
BRCA1-221ENST00000493795 ZNF474Q6S9Z5 364 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-221ENST00000493795 NKAPP1Q8N9T2 125 aa6.55□□□□□ -1.36
BRCA1-221ENST00000493795 C1orf159Q96HA4 380 aa6.55□□□□□ -1.36
BRCA1-221ENST00000493795 DLG5Q8TDM6 1919 aa6.55□□□□□ -1.36
BRCA1-221ENST00000493795 UBE2V1Q13404 147 aa6.55□□□□□ -1.36
BRCA1-221ENST00000493795 C5orf47Q569G3 176 aa6.55□□□□□ -1.36
BRCA1-221ENST00000493795 BHLHA9Q7RTU4 235 aa6.55□□□□□ -1.36
BRCA1-221ENST00000493795 UBR2Q8IWV8 1755 aa6.55□□□□□ -1.36
BRCA1-221ENST00000493795 WNT2P09544 360 aa6.55□□□□□ -1.36
BRCA1-221ENST00000493795 IGFBP3P17936 291 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-221ENST00000493795 PRCDQ00LT1 54 aa6.55□□□□□ -1.36
BRCA1-221ENST00000493795 LY6G5BQ8NDX9 201 aa6.55□□□□□ -1.36
BRCA1-221ENST00000493795 FAM90A9PA6NNJ1 464 aa6.55□□□□□ -1.36
BRCA1-221ENST00000493795 CECR9P0C854 216 aa6.55□□□□□ -1.36
BRCA1-221ENST00000493795 SP9P0CG40 484 aa6.55□□□□□ -1.36
BRCA1-221ENST00000493795 C1orf194Q5T5A4 169 aa6.55□□□□□ -1.36
BRCA1-221ENST00000493795 C19orf48Q6RUI8 117 aa6.55□□□□□ -1.36
BRCA1-221ENST00000493795 DMRTC2Q8IXT2 367 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-221ENST00000493795 A0A087X0K7 114 aa6.54□□□□□ -1.36
BRCA1-221ENST00000493795 YPEL1O60688 119 aa6.54□□□□□ -1.36
BRCA1-221ENST00000493795 SRD5A1P18405 259 aa6.54□□□□□ -1.36
BRCA1-221ENST00000493795 FAM201AQ5SY85 155 aa6.54□□□□□ -1.36
BRCA1-221ENST00000493795 FAM166AQ6J272 317 aa6.54□□□□□ -1.36
BRCA1-221ENST00000493795 YPEL2Q96QA6 119 aa6.54□□□□□ -1.36
BRCA1-221ENST00000493795 CSTL1Q9H114 145 aa6.54□□□□□ -1.36
BRCA1-221ENST00000493795 IGKV2-40A0A087WW87 121 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-221ENST00000493795 IGKV2D-40P01614 121 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-221ENST00000493795 HAMPP81172 84 aa6.54□□□□□ -1.36
BRCA1-221ENST00000493795 FBLIM1Q8WUP2 373 aa6.54□□□□□ -1.36
BRCA1-221ENST00000493795 CRYBG1Q9Y4K1 1723 aa6.54□□□□□ -1.36
BRCA1-221ENST00000493795 TRAV13-1A0A0B4J241 112 aa6.54□□□□□ -1.36
BRCA1-221ENST00000493795 TRAV41A0A0B4J266 112 aa6.54□□□□□ -1.36
BRCA1-221ENST00000493795 IGHV2OR16-5A0A0B4J2B6 119 aa6.54□□□□□ -1.36
BRCA1-221ENST00000493795 CLPSL1A2RUU4 121 aa6.54□□□□□ -1.36
BRCA1-221ENST00000493795 NDUFS5O43920 106 aa6.54□□□□□ -1.36
BRCA1-221ENST00000493795 IGHV3-53P01767 116 aa6.54□□□□□ -1.36
BRCA1-221ENST00000493795 PSG1P11464 419 aa6.54□□□□□ -1.36
BRCA1-221ENST00000493795 SPSB2Q99619 263 aa6.54□□□□□ -1.36
BRCA1-221ENST00000493795 SCRT1Q9BWW7 348 aa6.54□□□□□ -1.36
BRCA1-221ENST00000493795 TMEM133Q9H2Q1 129 aa6.54□□□□□ -1.36
BRCA1-221ENST00000493795 PLAC1Q9HBJ0 212 aa6.54□□□□□ -1.36
BRCA1-221ENST00000493795 LOC101059948A0A1B0GTJ6 334 aa6.54□□□□□ -1.36
BRCA1-221ENST00000493795 ZNF561-AS1K7EIQ3 104 aa6.54□□□□□ -1.36
BRCA1-221ENST00000493795 EFNB3Q15768 340 aa6.54□□□□□ -1.36
BRCA1-221ENST00000493795 HIST3H2BBQ8N257 126 aa6.54□□□□□ -1.36
BRCA1-221ENST00000493795 TMEM242Q9NWH2 141 aa6.54□□□□□ -1.36
BRCA1-221ENST00000493795 TRBV20-1A0A075B6N2 111 aa6.53□□□□□ -1.36
BRCA1-221ENST00000493795 TRAV25A0A0B4J276 109 aa6.53□□□□□ -1.36
BRCA1-221ENST00000493795 hDV102S1A0JD36 115 aa6.53□□□□□ -1.36
BRCA1-221ENST00000493795 CHKB-CPT1BH3BT56 60 aa6.53□□□□□ -1.36
BRCA1-221ENST00000493795 CD160O95971 181 aa6.53□□□□□ -1.36
BRCA1-221ENST00000493795 IFITM1P13164 125 aa6.53□□□□□ -1.36
BRCA1-221ENST00000493795 CEACAM1P13688 526 aa6.53□□□□□ -1.36
BRCA1-221ENST00000493795 LYZL1Q6UWQ5 148 aa6.53□□□□□ -1.36
BRCA1-221ENST00000493795 RNF222A6NCQ9 220 aa6.53□□□□□ -1.36
BRCA1-221ENST00000493795 DEFB121Q5J5C9 76 aa6.53□□□□□ -1.36
BRCA1-221ENST00000493795 HEPN1Q6WQI6 88 aa6.53□□□□□ -1.36
BRCA1-221ENST00000493795 C1QTNF4Q9BXJ3 329 aa6.53□□□□□ -1.36
BRCA1-221ENST00000493795 ZNF646O15015 1829 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-221ENST00000493795 A0A0G2JK05 382 aa6.53□□□□□ -1.36
BRCA1-221ENST00000493795 TCRAP04437 139 aa6.53□□□□□ -1.36
BRCA1-221ENST00000493795 FAM27E3Q08E93 113 aa6.53□□□□□ -1.36
BRCA1-221ENST00000493795 PSG3Q16557 428 aa6.53□□□□□ -1.36
BRCA1-221ENST00000493795 DSCR8Q96T75 97 aa6.53□□□□□ -1.36
BRCA1-221ENST00000493795 GAGE12BA1L429 117 aa6.53□□□□□ -1.36
BRCA1-221ENST00000493795 C17orf100A8MU93 164 aa6.53□□□□□ -1.36
BRCA1-221ENST00000493795 AMBPP02760 352 aa6.53□□□□□ -1.36
BRCA1-221ENST00000493795 PMVKQ15126 192 aa6.53□□□□□ -1.36
BRCA1-221ENST00000493795 SPXQ9BT56 116 aa6.53□□□□□ -1.36
BRCA1-221ENST00000493795 DEPPQ9NTK1 212 aa6.53□□□□□ -1.36
BRCA1-221ENST00000493795 SLX4Q8IY92 1834 aa6.53□□□□□ -1.36
BRCA1-221ENST00000493795 TRBV6-7A0A0A0MS04 114 aa6.53□□□□□ -1.36
BRCA1-221ENST00000493795 RBM3P98179 157 aaKnown RBP6.53□□□□□ -1.36
BRCA1-221ENST00000493795 LINC01590Q5TEZ4 76 aa6.53□□□□□ -1.36
BRCA1-221ENST00000493795 C1QL2Q7Z5L3 287 aa6.53□□□□□ -1.36
BRCA1-221ENST00000493795 RGPD8O14715 1765 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-221ENST00000493795 NDUFC2O95298 119 aa6.52□□□□□ -1.37
BRCA1-221ENST00000493795 MPV17L2Q567V2 206 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms