RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 OR8B2Q96RD0 313 aa7.78□□□□□ -1.16
NPHP3-209ENST00000493732 CHRDL1Q9BU40 450 aa7.78□□□□□ -1.16
NPHP3-209ENST00000493732 RAB1BQ9H0U4 201 aa7.78□□□□□ -1.16
NPHP3-209ENST00000493732 AURKAIP1Q9NWT8 199 aaPredicted RBP7.78□□□□□ -1.16
NPHP3-209ENST00000493732 ZFHX2Q9C0A1 2572 aaPredicted RBP7.78□□□□□ -1.16
NPHP3-209ENST00000493732 GVINP1Q7Z2Y8 2422 aa7.78□□□□□ -1.16
NPHP3-209ENST00000493732 TMEM238LA0A1B0GVL6 79 aa7.78□□□□□ -1.16
NPHP3-209ENST00000493732 BUB1B-PAK6H3BSN5 160 aa7.78□□□□□ -1.16
NPHP3-209ENST00000493732 K7EN84 100 aa7.78□□□□□ -1.16
NPHP3-209ENST00000493732 GATCO43716 136 aaKnown RBP7.78□□□□□ -1.16
NPHP3-209ENST00000493732 FAM87AP0C7U9 286 aa7.78□□□□□ -1.16
NPHP3-209ENST00000493732 OR5AU1Q8NGC0 362 aa7.78□□□□□ -1.16
NPHP3-209ENST00000493732 FAM122AQ96E09 287 aa7.78□□□□□ -1.16
NPHP3-209ENST00000493732 SMIM12Q96EX1 92 aa7.78□□□□□ -1.16
NPHP3-209ENST00000493732 ZNF503Q96F45 646 aa7.78□□□□□ -1.16
NPHP3-209ENST00000493732 RBM14Q96PK6 669 aaKnown RBP7.78□□□□□ -1.16
NPHP3-209ENST00000493732 TRGV9Q99603 122 aa7.78□□□□□ -1.16
NPHP3-209ENST00000493732 PAXXQ9BUH6 204 aa7.78□□□□□ -1.16
NPHP3-209ENST00000493732 SLC25A2Q9BXI2 301 aa7.78□□□□□ -1.16
NPHP3-209ENST00000493732 CDC42EP3Q9UKI2 254 aa7.78□□□□□ -1.16
NPHP3-209ENST00000493732 ACACAQ13085 2346 aa7.77□□□□□ -1.17
NPHP3-209ENST00000493732 PPIAL4CA0A0B4J2A2 164 aa7.77□□□□□ -1.17
NPHP3-209ENST00000493732 IGHV1-3A0A0C4DH29 117 aa7.77□□□□□ -1.17
NPHP3-209ENST00000493732 A0A1W2PPI3 338 aa7.77□□□□□ -1.17
NPHP3-209ENST00000493732 CGB1A6NKQ9 187 aa7.77□□□□□ -1.17
NPHP3-209ENST00000493732 LIPFP07098 398 aa7.77□□□□□ -1.17
NPHP3-209ENST00000493732 CRYGBP07316 175 aa7.77□□□□□ -1.17
NPHP3-209ENST00000493732 PPIAL4GP0DN37 164 aa7.77□□□□□ -1.17
NPHP3-209ENST00000493732 GATA2P23769 480 aaPredicted RBP7.77□□□□□ -1.17
NPHP3-209ENST00000493732 LGALS4P56470 323 aa7.77□□□□□ -1.17
NPHP3-209ENST00000493732 DIAPH2-AS1Q14236 149 aa7.77□□□□□ -1.17
NPHP3-209ENST00000493732 MLANAQ16655 118 aa7.77□□□□□ -1.17
NPHP3-209ENST00000493732 TMEM116Q8NCL8 245 aa7.77□□□□□ -1.17
NPHP3-209ENST00000493732 OR1L6Q8NGR2 347 aa7.77□□□□□ -1.17
NPHP3-209ENST00000493732 RPEQ96AT9 228 aa7.77□□□□□ -1.17
NPHP3-209ENST00000493732 FAM167A-AS1Q96KT0 104 aa7.77□□□□□ -1.17
NPHP3-209ENST00000493732 GNB1LQ9BYB4 327 aa7.77□□□□□ -1.17
NPHP3-209ENST00000493732 FNDC4Q9H6D8 234 aaPredicted RBP7.77□□□□□ -1.17
NPHP3-209ENST00000493732 TNFRSF19Q9NS68 423 aa7.77□□□□□ -1.17
NPHP3-209ENST00000493732 ZNF355PQ9NSJ1 428 aa7.77□□□□□ -1.17
NPHP3-209ENST00000493732 SIGLEC9Q9Y336 463 aa7.77□□□□□ -1.17
NPHP3-209ENST00000493732 IGLC7A0M8Q6 106 aa7.76□□□□□ -1.17
NPHP3-209ENST00000493732 GGTLC3B5MD39 225 aa7.76□□□□□ -1.17
NPHP3-209ENST00000493732 E7EUB6 86 aa7.76□□□□□ -1.17
NPHP3-209ENST00000493732 CCL21O00585 134 aa7.76□□□□□ -1.17
NPHP3-209ENST00000493732 CEACAM3P40198 252 aa7.76□□□□□ -1.17
NPHP3-209ENST00000493732 PAFAH1B2P68402 229 aa7.76□□□□□ -1.17
NPHP3-209ENST00000493732 TNXAQ16473 311 aa7.76□□□□□ -1.17
NPHP3-209ENST00000493732 ZNF841Q6ZN19 808 aa7.76□□□□□ -1.17
NPHP3-209ENST00000493732 PPP1R27Q86WC6 154 aa7.76□□□□□ -1.17
NPHP3-209ENST00000493732 GBGT1Q8N5D6 347 aa7.76□□□□□ -1.17
NPHP3-209ENST00000493732 V9GYV3 84 aa7.76□□□□□ -1.17
NPHP3-209ENST00000493732 CEP250Q9BV73 2442 aa7.76□□□□□ -1.17
NPHP3-209ENST00000493732 TNCP24821 2201 aa7.76□□□□□ -1.17
NPHP3-209ENST00000493732 DSPP15924 2871 aaKnown RBP7.76□□□□□ -1.17
NPHP3-209ENST00000493732 HNF1AP20823 631 aa7.76□□□□□ -1.17
NPHP3-209ENST00000493732 PLP1P60201 277 aa7.76□□□□□ -1.17
NPHP3-209ENST00000493732 RANP62826 216 aaKnown RBP7.76□□□□□ -1.17
NPHP3-209ENST00000493732 CX3CL1P78423 397 aa7.76□□□□□ -1.17
NPHP3-209ENST00000493732 DEFA6Q01524 100 aa7.76□□□□□ -1.17
NPHP3-209ENST00000493732 IQCJQ1A5X6 159 aa7.76□□□□□ -1.17
NPHP3-209ENST00000493732 C10orf55Q5SWW7 151 aa7.76□□□□□ -1.17
NPHP3-209ENST00000493732 IBA57Q5T440 356 aaKnown RBP7.76□□□□□ -1.17
NPHP3-209ENST00000493732 RASL11AQ6T310 242 aa7.76□□□□□ -1.17
NPHP3-209ENST00000493732 ZNF600Q6ZNG1 722 aa7.76□□□□□ -1.17
NPHP3-209ENST00000493732 LINC01560Q8TB33 94 aa7.76□□□□□ -1.17
NPHP3-209ENST00000493732 NEU4Q8WWR8 484 aaPredicted RBP7.76□□□□□ -1.17
NPHP3-209ENST00000493732 PRDM13Q9H4Q3 707 aa7.76□□□□□ -1.17
NPHP3-209ENST00000493732 MAP1BP46821 2468 aaKnown RBP7.75□□□□□ -1.17
NPHP3-209ENST00000493732 IGKV1D-37A0A075B6S9 117 aa7.75□□□□□ -1.17
NPHP3-209ENST00000493732 TRAV20A0A0B4J274 112 aa7.75□□□□□ -1.17
NPHP3-209ENST00000493732 FAM90A27PA6NNH2 459 aa7.75□□□□□ -1.17
NPHP3-209ENST00000493732 HYPMO75409 117 aa7.75□□□□□ -1.17
NPHP3-209ENST00000493732 COL8A2P25067 703 aa7.75□□□□□ -1.17
NPHP3-209ENST00000493732 FAM231DQ6ZW35 169 aa7.75□□□□□ -1.17
NPHP3-209ENST00000493732 LINC00305Q7Z4B0 112 aa7.75□□□□□ -1.17
NPHP3-209ENST00000493732 S100A7AQ86SG5 101 aa7.75□□□□□ -1.17
NPHP3-209ENST00000493732 LY6G5BQ8NDX9 201 aa7.75□□□□□ -1.17
NPHP3-209ENST00000493732 MISP3Q96FF7 219 aa7.75□□□□□ -1.17
NPHP3-209ENST00000493732 IGF2BP2-AS1Q96M15 143 aa7.75□□□□□ -1.17
NPHP3-209ENST00000493732 NOL4LQ96MY1 436 aaPredicted RBP7.75□□□□□ -1.17
NPHP3-209ENST00000493732 F11RQ9Y624 299 aaKnown RBP7.75□□□□□ -1.17
NPHP3-209ENST00000493732 APC2O95996 2303 aa7.74□□□□□ -1.17
NPHP3-209ENST00000493732 SLC17A3O00476 420 aa7.74□□□□□ -1.17
NPHP3-209ENST00000493732 FCN1O00602 326 aa7.74□□□□□ -1.17
NPHP3-209ENST00000493732 GZMBP10144 247 aa7.74□□□□□ -1.17
NPHP3-209ENST00000493732 ESDP10768 282 aa7.74□□□□□ -1.17
NPHP3-209ENST00000493732 CRISP2P16562 243 aa7.74□□□□□ -1.17
NPHP3-209ENST00000493732 MRGPRG-AS1Q2M3A8 158 aa7.74□□□□□ -1.17
NPHP3-209ENST00000493732 MRPL18Q9H0U6 180 aaKnown RBP7.74□□□□□ -1.17
NPHP3-209ENST00000493732 CBLN4Q9NTU7 201 aa7.74□□□□□ -1.17
NPHP3-209ENST00000493732 RNF24Q9Y225 148 aa7.74□□□□□ -1.17
NPHP3-209ENST00000493732 MUC6Q6W4X9 2439 aa7.74□□□□□ -1.17
NPHP3-209ENST00000493732 ANKRD11Q6UB99 2663 aaPredicted RBP7.74□□□□□ -1.17
NPHP3-209ENST00000493732 M0R1W7 72 aa7.74□□□□□ -1.17
NPHP3-209ENST00000493732 PEX7O00628 323 aa7.74□□□□□ -1.17
NPHP3-209ENST00000493732 PLAUP00749 431 aa7.74□□□□□ -1.17
NPHP3-209ENST00000493732 HLA-DQA1P01909 254 aa7.74□□□□□ -1.17
NPHP3-209ENST00000493732 HTR1DP28221 377 aa7.74□□□□□ -1.17
NPHP3-209ENST00000493732 ADMP35318 185 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms