RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 PRM2P04554 102 aa7.8□□□□□ -1.16
HDAC6-233ENST00000489352 ID1P41134 155 aa7.8□□□□□ -1.16
HDAC6-233ENST00000489352 RORCP51449 518 aa7.8□□□□□ -1.16
HDAC6-233ENST00000489352 CATR1Q13166 79 aa7.8□□□□□ -1.16
HDAC6-233ENST00000489352 POU2AF1Q16633 256 aa7.8□□□□□ -1.16
HDAC6-233ENST00000489352 AMIGO2Q86SJ2 522 aa7.8□□□□□ -1.16
HDAC6-233ENST00000489352 CMTM1Q8IZ96 169 aa7.8□□□□□ -1.16
HDAC6-233ENST00000489352 IGF2BP2-AS1Q96M15 143 aa7.8□□□□□ -1.16
HDAC6-233ENST00000489352 FKBP11Q9NYL4 201 aa7.8□□□□□ -1.16
HDAC6-233ENST00000489352 TIMM8BQ9Y5J9 83 aaPredicted RBP7.8□□□□□ -1.16
HDAC6-233ENST00000489352 DNAH8Q96JB1 4490 aa7.79□□□□□ -1.16
HDAC6-233ENST00000489352 IGKV1D-13A0A0B4J2D9 117 aa7.79□□□□□ -1.16
HDAC6-233ENST00000489352 SAC3D1A6NKF1 404 aa7.79□□□□□ -1.16
HDAC6-233ENST00000489352 ZNF701M0R085 212 aaPredicted RBP7.79□□□□□ -1.16
HDAC6-233ENST00000489352 NXPH4O95158 308 aa7.79□□□□□ -1.16
HDAC6-233ENST00000489352 IGKV1-13P0DP09 117 aa7.79□□□□□ -1.16
HDAC6-233ENST00000489352 GADD45AP24522 165 aa7.79□□□□□ -1.16
HDAC6-233ENST00000489352 TSPOP30536 169 aa7.79□□□□□ -1.16
HDAC6-233ENST00000489352 DEFB1P60022 68 aa7.79□□□□□ -1.16
HDAC6-233ENST00000489352 EIF4EBP1Q13541 118 aaPredicted RBP7.79□□□□□ -1.16
HDAC6-233ENST00000489352 RAB11BQ15907 218 aa7.79□□□□□ -1.16
HDAC6-233ENST00000489352 FAM78BQ5VT40 261 aa7.79□□□□□ -1.16
HDAC6-233ENST00000489352 C16orf54Q6UWD8 224 aa7.79□□□□□ -1.16
HDAC6-233ENST00000489352 SIGLEC15Q6ZMC9 328 aa7.79□□□□□ -1.16
HDAC6-233ENST00000489352 FGF20Q9NP95 211 aaPredicted RBP7.79□□□□□ -1.16
HDAC6-233ENST00000489352 MRPS18AQ9NVS2 196 aaKnown RBP7.79□□□□□ -1.16
HDAC6-233ENST00000489352 DENRO43583 198 aaKnown RBP7.78□□□□□ -1.16
HDAC6-233ENST00000489352 HNRNPCP07910 306 aaKnown RBP eCLIP7.78□□□□□ -1.16
HDAC6-233ENST00000489352 KRTAP10-4P60372 401 aaPredicted RBP7.78□□□□□ -1.16
HDAC6-233ENST00000489352 ZIK1Q3SY52 487 aaPredicted RBP7.78□□□□□ -1.16
HDAC6-233ENST00000489352 SECTM1Q8WVN6 248 aa7.78□□□□□ -1.16
HDAC6-233ENST00000489352 PLEKHA2Q9HB19 425 aa7.78□□□□□ -1.16
HDAC6-233ENST00000489352 NSG2Q9Y328 171 aa7.78□□□□□ -1.16
HDAC6-233ENST00000489352 LY96Q9Y6Y9 160 aa7.78□□□□□ -1.16
HDAC6-233ENST00000489352 TNXBP22105 4242 aa7.77□□□□□ -1.17
HDAC6-233ENST00000489352 MFNGO00587 321 aa7.77□□□□□ -1.17
HDAC6-233ENST00000489352 INSP01308 110 aa7.77□□□□□ -1.17
HDAC6-233ENST00000489352 HTN1P15515 57 aa7.77□□□□□ -1.17
HDAC6-233ENST00000489352 PAX9P55771 341 aa7.77□□□□□ -1.17
HDAC6-233ENST00000489352 ZNF79Q15937 498 aa7.77□□□□□ -1.17
HDAC6-233ENST00000489352 Q6ZS49 121 aa7.77□□□□□ -1.17
HDAC6-233ENST00000489352 Q8N814 137 aa7.77□□□□□ -1.17
HDAC6-233ENST00000489352 TSPAN14Q8NG11 270 aa7.77□□□□□ -1.17
HDAC6-233ENST00000489352 PHYHIPQ92561 330 aa7.77□□□□□ -1.17
HDAC6-233ENST00000489352 PRNDQ9UKY0 176 aa7.77□□□□□ -1.17
HDAC6-233ENST00000489352 OAZ3Q9UMX2 235 aa7.77□□□□□ -1.17
HDAC6-233ENST00000489352 KCNK7Q9Y2U2 307 aa7.77□□□□□ -1.17
HDAC6-233ENST00000489352 FAT4Q6V0I7 4981 aa7.76□□□□□ -1.17
HDAC6-233ENST00000489352 IRGMA1A4Y4 181 aa7.76□□□□□ -1.17
HDAC6-233ENST00000489352 MARCH11A6NNE9 402 aa7.76□□□□□ -1.17
HDAC6-233ENST00000489352 MT1HL1P0DM35 61 aa7.76□□□□□ -1.17
HDAC6-233ENST00000489352 AZU1P20160 251 aa7.76□□□□□ -1.17
HDAC6-233ENST00000489352 EVI2AP22794 236 aa7.76□□□□□ -1.17
HDAC6-233ENST00000489352 RANBP1P43487 201 aa7.76□□□□□ -1.17
HDAC6-233ENST00000489352 RASSF2P50749 326 aa7.76□□□□□ -1.17
HDAC6-233ENST00000489352 ARPC4P59998 168 aa7.76□□□□□ -1.17
HDAC6-233ENST00000489352 ERHP84090 104 aaKnown RBP7.76□□□□□ -1.17
HDAC6-233ENST00000489352 Q6ZSA8 131 aa7.76□□□□□ -1.17
HDAC6-233ENST00000489352 SCXQ7RTU7 201 aa7.76□□□□□ -1.17
HDAC6-233ENST00000489352 OR51H1Q8NH63 302 aa7.76□□□□□ -1.17
HDAC6-233ENST00000489352 RHOXF1Q8NHV9 184 aa7.76□□□□□ -1.17
HDAC6-233ENST00000489352 RBPMSQ93062 196 aaKnown RBP7.76□□□□□ -1.17
HDAC6-233ENST00000489352 NOP10Q9NPE3 64 aaKnown RBP7.76□□□□□ -1.17
HDAC6-233ENST00000489352 CCL28Q9NRJ3 127 aa7.76□□□□□ -1.17
HDAC6-233ENST00000489352 COMMD9Q9P000 198 aa7.76□□□□□ -1.17
HDAC6-233ENST00000489352 CLEC2DQ9UHP7 191 aa7.76□□□□□ -1.17
HDAC6-233ENST00000489352 IGKV1D-8A0A087WSZ0 117 aa7.75□□□□□ -1.17
HDAC6-233ENST00000489352 A0A0U1RQV1 116 aa7.75□□□□□ -1.17
HDAC6-233ENST00000489352 K7EP13 123 aa7.75□□□□□ -1.17
HDAC6-233ENST00000489352 KRASP01116 189 aa7.75□□□□□ -1.17
HDAC6-233ENST00000489352 FCGR1AP12314 374 aa7.75□□□□□ -1.17
HDAC6-233ENST00000489352 GABRB1P18505 474 aa7.75□□□□□ -1.17
HDAC6-233ENST00000489352 CALB2P22676 271 aa7.75□□□□□ -1.17
HDAC6-233ENST00000489352 TMED4Q7Z7H5 227 aa7.75□□□□□ -1.17
HDAC6-233ENST00000489352 ZBTB34Q8NCN2 500 aa7.75□□□□□ -1.17
HDAC6-233ENST00000489352 BPIFB6Q8NFQ5 453 aa7.75□□□□□ -1.17
HDAC6-233ENST00000489352 LGALS14Q8TCE9 139 aa7.75□□□□□ -1.17
HDAC6-233ENST00000489352 Q8WTZ3 238 aa7.75□□□□□ -1.17
HDAC6-233ENST00000489352 C16orf74Q96GX8 76 aa7.75□□□□□ -1.17
HDAC6-233ENST00000489352 LINC01587Q99440 93 aa7.75□□□□□ -1.17
HDAC6-233ENST00000489352 DNAJC4Q9NNZ3 241 aa7.75□□□□□ -1.17
HDAC6-233ENST00000489352 A0A096LPF7 62 aa7.74□□□□□ -1.17
HDAC6-233ENST00000489352 DBX1A6NMT0 343 aa7.74□□□□□ -1.17
HDAC6-233ENST00000489352 GSTZ1O43708 216 aaPredicted RBP7.74□□□□□ -1.17
HDAC6-233ENST00000489352 SNCAP37840 140 aa7.74□□□□□ -1.17
HDAC6-233ENST00000489352 PSMB3P49720 205 aa7.74□□□□□ -1.17
HDAC6-233ENST00000489352 RPL37AP61513 92 aaKnown RBP7.74□□□□□ -1.17
HDAC6-233ENST00000489352 ACOT6Q3I5F7 207 aaPredicted RBP7.74□□□□□ -1.17
HDAC6-233ENST00000489352 HSD17B12Q53GQ0 312 aa7.74□□□□□ -1.17
HDAC6-233ENST00000489352 AADACL3Q5VUY0 350 aa7.74□□□□□ -1.17
HDAC6-233ENST00000489352 SFXN4Q6P4A7 337 aa7.74□□□□□ -1.17
HDAC6-233ENST00000489352 TMEM144Q7Z5S9 345 aa7.74□□□□□ -1.17
HDAC6-233ENST00000489352 OR10R2Q8NGX6 335 aa7.74□□□□□ -1.17
HDAC6-233ENST00000489352 TMEM203Q969S6 136 aa7.74□□□□□ -1.17
HDAC6-233ENST00000489352 SLC7A6OSQ96CW6 309 aaPredicted RBP7.74□□□□□ -1.17
HDAC6-233ENST00000489352 DPH3P1Q9H4G8 78 aa7.74□□□□□ -1.17
HDAC6-233ENST00000489352 AP4S1Q9Y587 144 aa7.74□□□□□ -1.17
HDAC6-233ENST00000489352 U3KQE9 123 aa7.74□□□□□ -1.17
HDAC6-233ENST00000489352 TRAV30A0A087WSZ9 112 aa7.73□□□□□ -1.17
HDAC6-233ENST00000489352 A0A0B4J293 547 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms