RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 GAMTQ14353 236 aa12.47□□□□□ -0.41
CLDN11-208ENST00000488989 CLINT1Q14677 625 aa12.47□□□□□ -0.41
CLDN11-208ENST00000488989 TEX38Q6PEX7 206 aa12.47□□□□□ -0.41
CLDN11-208ENST00000488989 ZNF329Q86UD4 541 aa12.47□□□□□ -0.41
CLDN11-208ENST00000488989 TMEM116Q8NCL8 245 aa12.47□□□□□ -0.41
CLDN11-208ENST00000488989 MYOZ3Q8TDC0 251 aa12.47□□□□□ -0.41
CLDN11-208ENST00000488989 SCARB1Q8WTV0 552 aa12.47□□□□□ -0.41
CLDN11-208ENST00000488989 USMG5Q96IX5 58 aa12.47□□□□□ -0.41
CLDN11-208ENST00000488989 NPVFQ9HCQ7 196 aa12.47□□□□□ -0.41
CLDN11-208ENST00000488989 ZNF355PQ9NSJ1 428 aa12.47□□□□□ -0.41
CLDN11-208ENST00000488989 MRPL36Q9P0J6 103 aaKnown RBP12.47□□□□□ -0.41
CLDN11-208ENST00000488989 TRGV3P03979 118 aa12.46□□□□□ -0.41
CLDN11-208ENST00000488989 RAB9AP51151 201 aa12.46□□□□□ -0.41
CLDN11-208ENST00000488989 SRSF2Q01130 221 aaKnown RBP12.46□□□□□ -0.41
CLDN11-208ENST00000488989 KIAA0141Q14154 515 aaPredicted RBP12.46□□□□□ -0.41
CLDN11-208ENST00000488989 ZNF266Q14584 549 aa12.46□□□□□ -0.41
CLDN11-208ENST00000488989 C10orf99Q6UWK7 81 aa12.46□□□□□ -0.41
CLDN11-208ENST00000488989 TMEM144Q7Z5S9 345 aa12.46□□□□□ -0.41
CLDN11-208ENST00000488989 CENPVQ7Z7K6 275 aaPredicted RBP12.46□□□□□ -0.41
CLDN11-208ENST00000488989 UBAC2Q8NBM4 344 aa12.46□□□□□ -0.41
CLDN11-208ENST00000488989 OR4X1Q8NH49 305 aa12.46□□□□□ -0.41
CLDN11-208ENST00000488989 SLC35E1Q96K37 410 aa12.46□□□□□ -0.41
CLDN11-208ENST00000488989 CXorf58Q96LI9 332 aa12.46□□□□□ -0.41
CLDN11-208ENST00000488989 MS4A10Q96PG2 267 aa12.46□□□□□ -0.41
CLDN11-208ENST00000488989 ATP6V0BQ99437 205 aa12.46□□□□□ -0.41
CLDN11-208ENST00000488989 KLK15Q9H2R5 256 aa12.46□□□□□ -0.41
CLDN11-208ENST00000488989 WDR83OSQ9Y284 106 aa12.46□□□□□ -0.41
CLDN11-208ENST00000488989 BOLA1Q9Y3E2 137 aa12.46□□□□□ -0.41
CLDN11-208ENST00000488989 JMJD1CQ15652 2540 aa12.46□□□□□ -0.42
CLDN11-208ENST00000488989 A0A1B0GUS0 222 aa12.45□□□□□ -0.42
CLDN11-208ENST00000488989 CLPSL1A2RUU4 121 aa12.45□□□□□ -0.42
CLDN11-208ENST00000488989 MFSD2BA6NFX1 497 aa12.45□□□□□ -0.42
CLDN11-208ENST00000488989 JTBO76095 146 aa12.45□□□□□ -0.42
CLDN11-208ENST00000488989 PF4V1P10720 104 aa12.45□□□□□ -0.42
CLDN11-208ENST00000488989 PROK1P58294 105 aa12.45□□□□□ -0.42
CLDN11-208ENST00000488989 TPPP2P59282 170 aa12.45□□□□□ -0.42
CLDN11-208ENST00000488989 C15orf32Q32M92 178 aa12.45□□□□□ -0.42
CLDN11-208ENST00000488989 RPL7L1Q6DKI1 246 aaKnown RBP12.45□□□□□ -0.42
CLDN11-208ENST00000488989 TREML4Q6UXN2 200 aa12.45□□□□□ -0.42
CLDN11-208ENST00000488989 SLC51BQ86UW2 128 aa12.45□□□□□ -0.42
CLDN11-208ENST00000488989 KLHDC1Q8N7A1 406 aa12.45□□□□□ -0.42
CLDN11-208ENST00000488989 THAP8Q8NA92 274 aa12.45□□□□□ -0.42
CLDN11-208ENST00000488989 TXN2Q99757 166 aa12.45□□□□□ -0.42
CLDN11-208ENST00000488989 ARV1Q9H2C2 271 aa12.45□□□□□ -0.42
CLDN11-208ENST00000488989 LSM4Q9Y4Z0 139 aaKnown RBP12.45□□□□□ -0.42
CLDN11-208ENST00000488989 BORCS7-ASMTA0A0B4J1R7 106 aa12.44□□□□□ -0.42
CLDN11-208ENST00000488989 IGHV3-21A0A0B4J1V1 117 aa12.44□□□□□ -0.42
CLDN11-208ENST00000488989 A0A0G2JLM5 398 aa12.44□□□□□ -0.42
CLDN11-208ENST00000488989 F8W735 103 aaPredicted RBP12.44□□□□□ -0.42
CLDN11-208ENST00000488989 MFAP4P55083 255 aa12.44□□□□□ -0.42
CLDN11-208ENST00000488989 DEFA5Q01523 94 aa12.44□□□□□ -0.42
CLDN11-208ENST00000488989 ATP5G2Q06055 141 aa12.44□□□□□ -0.42
CLDN11-208ENST00000488989 STOML3Q8TAV4 291 aa12.44□□□□□ -0.42
CLDN11-208ENST00000488989 ZNF502Q8TBZ5 544 aa12.44□□□□□ -0.42
CLDN11-208ENST00000488989 WDR61Q9GZS3 305 aaKnown RBP12.44□□□□□ -0.42
CLDN11-208ENST00000488989 C21orf62Q9NYP8 219 aa12.44□□□□□ -0.42
CLDN11-208ENST00000488989 RNF114Q9Y508 228 aa12.44□□□□□ -0.42
CLDN11-208ENST00000488989 IGKV1OR2-108A0A075B7D4 117 aa12.43□□□□□ -0.42
CLDN11-208ENST00000488989 TRBV7-1A0A0A6YYK4 115 aa12.43□□□□□ -0.42
CLDN11-208ENST00000488989 UBE2L5PA0A1B0GUS4 154 aa12.43□□□□□ -0.42
CLDN11-208ENST00000488989 MPDU1O75352 247 aa12.43□□□□□ -0.42
CLDN11-208ENST00000488989 CLN5O75503 358 aa12.43□□□□□ -0.42
CLDN11-208ENST00000488989 IFNA5P01569 189 aa12.43□□□□□ -0.42
CLDN11-208ENST00000488989 IGHV3-48P01763 117 aa12.43□□□□□ -0.42
CLDN11-208ENST00000488989 NPBWR1P48145 328 aa12.43□□□□□ -0.42
CLDN11-208ENST00000488989 RND2P52198 227 aa12.43□□□□□ -0.42
CLDN11-208ENST00000488989 ACSM6Q6P461 480 aa12.43□□□□□ -0.42
CLDN11-208ENST00000488989 OR5AU1Q8NGC0 362 aa12.43□□□□□ -0.42
CLDN11-208ENST00000488989 NPIPB3Q92617 1050 aa12.43□□□□□ -0.42
CLDN11-208ENST00000488989 EEF1AKMT3Q96AZ1 226 aa12.43□□□□□ -0.42
CLDN11-208ENST00000488989 ZNF471Q9BX82 626 aaPredicted RBP12.43□□□□□ -0.42
CLDN11-208ENST00000488989 IGKV1D-37A0A075B6S9 117 aa12.42□□□□□ -0.42
CLDN11-208ENST00000488989 SMCO3A2RU48 225 aa12.42□□□□□ -0.42
CLDN11-208ENST00000488989 EIF5AP63241 154 aaKnown RBP12.42□□□□□ -0.42
CLDN11-208ENST00000488989 AKR1C1Q04828 323 aa12.42□□□□□ -0.42
CLDN11-208ENST00000488989 ZNF343Q6P1L6 599 aa12.42□□□□□ -0.42
CLDN11-208ENST00000488989 TEPPQ6URK8 271 aa12.42□□□□□ -0.42
CLDN11-208ENST00000488989 LCNL1Q6ZST4 164 aa12.42□□□□□ -0.42
CLDN11-208ENST00000488989 PRIMA1Q86XR5 153 aa12.42□□□□□ -0.42
CLDN11-208ENST00000488989 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.42□□□□□ -0.42
CLDN11-208ENST00000488989 ZNF491Q8N8L2 437 aa12.42□□□□□ -0.42
CLDN11-208ENST00000488989 WFDC12Q8WWY7 111 aa12.42□□□□□ -0.42
CLDN11-208ENST00000488989 ACY3Q96HD9 319 aa12.42□□□□□ -0.42
CLDN11-208ENST00000488989 CCDC140Q96MF4 163 aa12.42□□□□□ -0.42
CLDN11-208ENST00000488989 GINS3Q9BRX5 216 aa12.42□□□□□ -0.42
CLDN11-208ENST00000488989 RPLP1P05386 114 aaKnown RBP12.41□□□□□ -0.42
CLDN11-208ENST00000488989 IGLC1P0CG04 106 aa12.41□□□□□ -0.42
CLDN11-208ENST00000488989 TPT1P13693 172 aaKnown RBP12.41□□□□□ -0.42
CLDN11-208ENST00000488989 FGF7P21781 194 aa12.41□□□□□ -0.42
CLDN11-208ENST00000488989 TCTEX1D4Q5JR98 221 aa12.41□□□□□ -0.42
CLDN11-208ENST00000488989 FAM209BQ5JX69 171 aa12.41□□□□□ -0.42
CLDN11-208ENST00000488989 BTNL8Q6UX41 500 aa12.41□□□□□ -0.42
CLDN11-208ENST00000488989 OR4X2Q8NGF9 303 aa12.41□□□□□ -0.42
CLDN11-208ENST00000488989 UBE2E2Q96LR5 201 aa12.41□□□□□ -0.42
CLDN11-208ENST00000488989 TRGV9Q99603 122 aa12.41□□□□□ -0.42
CLDN11-208ENST00000488989 MGST2Q99735 147 aa12.41□□□□□ -0.42
CLDN11-208ENST00000488989 GAR1Q9NY12 217 aaKnown RBP12.41□□□□□ -0.42
CLDN11-208ENST00000488989 TRAV30A0A087WSZ9 112 aa12.4□□□□□ -0.42
CLDN11-208ENST00000488989 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.4□□□□□ -0.42
CLDN11-208ENST00000488989 FOXL1Q12952 345 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms