RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 ROBO3Q96MS0 1386 aa0.82□□□□□ -2.28
CD46-215ENST00000488596 RIC1Q4ADV7 1423 aa0.81□□□□□ -2.28
CD46-215ENST00000488596 TNRC6BQ9UPQ9 1833 aaKnown RBP0.81□□□□□ -2.28
CD46-215ENST00000488596 IGKV2D-26A0A0A0MRZ7 120 aa0.81□□□□□ -2.28
CD46-215ENST00000488596 PQLC2LA1A4F0 135 aa0.81□□□□□ -2.28
CD46-215ENST00000488596 RPP14O95059 124 aaKnown RBP0.81□□□□□ -2.28
CD46-215ENST00000488596 CNIH1O95406 144 aa0.81□□□□□ -2.28
CD46-215ENST00000488596 BRS3P32247 399 aa0.81□□□□□ -2.28
CD46-215ENST00000488596 OMPP47874 163 aa0.81□□□□□ -2.28
CD46-215ENST00000488596 TEX36Q5VZQ5 186 aa0.81□□□□□ -2.28
CD46-215ENST00000488596 DPPA3Q6W0C5 159 aa0.81□□□□□ -2.28
CD46-215ENST00000488596 HIST3H2BBQ8N257 126 aa0.81□□□□□ -2.28
CD46-215ENST00000488596 C12orf29Q8N999 325 aa0.81□□□□□ -2.28
CD46-215ENST00000488596 OR4E2Q8NGC2 313 aa0.81□□□□□ -2.28
CD46-215ENST00000488596 OR4D11Q8NGI4 311 aa0.81□□□□□ -2.28
CD46-215ENST00000488596 OR4C6Q8NH72 309 aa0.81□□□□□ -2.28
CD46-215ENST00000488596 OR51V1Q9H2C8 321 aa0.81□□□□□ -2.28
CD46-215ENST00000488596 TRABDQ9H4I3 376 aa0.81□□□□□ -2.28
CD46-215ENST00000488596 C22orf24Q9Y442 160 aa0.81□□□□□ -2.28
CD46-215ENST00000488596 ZNF106Q9H2Y7 1883 aaKnown RBP0.8□□□□□ -2.28
CD46-215ENST00000488596 C2orf70A6NJV1 201 aa0.8□□□□□ -2.28
CD46-215ENST00000488596 TMEM210A6NLX4 147 aa0.8□□□□□ -2.28
CD46-215ENST00000488596 PIRO00625 290 aa0.8□□□□□ -2.28
CD46-215ENST00000488596 GEMIN2O14893 280 aaKnown RBP0.8□□□□□ -2.28
CD46-215ENST00000488596 OR2J2O76002 312 aa0.8□□□□□ -2.28
CD46-215ENST00000488596 IFNA10P01566 189 aa0.8□□□□□ -2.28
CD46-215ENST00000488596 TCRBP04435 133 aa0.8□□□□□ -2.28
CD46-215ENST00000488596 AP3S2P59780 193 aa0.8□□□□□ -2.28
CD46-215ENST00000488596 LSM6P62312 80 aaKnown RBP0.8□□□□□ -2.28
CD46-215ENST00000488596 RANP62826 216 aaKnown RBP0.8□□□□□ -2.28
CD46-215ENST00000488596 AESQ08117 197 aa0.8□□□□□ -2.28
CD46-215ENST00000488596 DEFB128Q7Z7B8 93 aa0.8□□□□□ -2.28
CD46-215ENST00000488596 LINC00311Q8N616 119 aa0.8□□□□□ -2.28
CD46-215ENST00000488596 PSTPIP2Q9H939 334 aa0.8□□□□□ -2.28
CD46-215ENST00000488596 SNURFQ9Y675 71 aa0.8□□□□□ -2.28
CD46-215ENST00000488596 INTS1Q8N201 2190 aaKnown RBP0.8□□□□□ -2.28
CD46-215ENST00000488596 NEO1Q92859 1461 aa0.8□□□□□ -2.28
CD46-215ENST00000488596 CAMSAP1Q5T5Y3 1602 aa0.79□□□□□ -2.28
CD46-215ENST00000488596 TRAV3A0A0B4J244 114 aa0.79□□□□□ -2.28
CD46-215ENST00000488596 SMIM9A6NGZ8 99 aa0.79□□□□□ -2.28
CD46-215ENST00000488596 KPNA3O00505 521 aaPredicted RBP0.79□□□□□ -2.28
CD46-215ENST00000488596 ATP5HO75947 161 aa0.79□□□□□ -2.28
CD46-215ENST00000488596 TTRP02766 147 aa0.79□□□□□ -2.28
CD46-215ENST00000488596 IFNA6P05013 189 aa0.79□□□□□ -2.28
CD46-215ENST00000488596 CTXN2P0C2S0 81 aa0.79□□□□□ -2.28
CD46-215ENST00000488596 SMIM10L2AP0DMW4 78 aa0.79□□□□□ -2.28
CD46-215ENST00000488596 SMIM10L2BP0DMW5 78 aa0.79□□□□□ -2.28
CD46-215ENST00000488596 HOXA6P31267 233 aa0.79□□□□□ -2.28
CD46-215ENST00000488596 SSR2P43308 183 aa0.79□□□□□ -2.28
CD46-215ENST00000488596 DEFA3P59666 94 aa0.79□□□□□ -2.28
CD46-215ENST00000488596 REEP5Q00765 189 aa0.79□□□□□ -2.28
CD46-215ENST00000488596 SRSF6Q13247 344 aaKnown RBP0.79□□□□□ -2.28
CD46-215ENST00000488596 RHEBQ15382 184 aa0.79□□□□□ -2.28
CD46-215ENST00000488596 RNASE10Q5GAN6 216 aaKnown RBP0.79□□□□□ -2.28
CD46-215ENST00000488596 KRT222Q8N1A0 295 aa0.79□□□□□ -2.28
CD46-215ENST00000488596 PAIP2Q9BPZ3 127 aaKnown RBP0.79□□□□□ -2.28
CD46-215ENST00000488596 CMSS1Q9BQ75 279 aaKnown RBP0.79□□□□□ -2.28
CD46-215ENST00000488596 C14orf105Q9NVL8 296 aa0.79□□□□□ -2.28
CD46-215ENST00000488596 SLC22A13Q9Y226 551 aa0.79□□□□□ -2.28
CD46-215ENST00000488596 PLXND1Q9Y4D7 1925 aa0.79□□□□□ -2.28
CD46-215ENST00000488596 ZFYVE9O95405 1425 aa0.79□□□□□ -2.28
CD46-215ENST00000488596 NCOA1Q15788 1441 aa0.79□□□□□ -2.28
CD46-215ENST00000488596 PCF11O94913 1555 aaKnown RBP0.79□□□□□ -2.28
CD46-215ENST00000488596 DOCK3Q8IZD9 2030 aa0.78□□□□□ -2.28
CD46-215ENST00000488596 A0A087WUJ7 227 aa0.78□□□□□ -2.28
CD46-215ENST00000488596 A0A0D9SG52 128 aa0.78□□□□□ -2.28
CD46-215ENST00000488596 OR2T1O43869 369 aa0.78□□□□□ -2.28
CD46-215ENST00000488596 MGST1P10620 155 aaKnown RBP0.78□□□□□ -2.28
CD46-215ENST00000488596 NEFHP12036 1026 aa0.78□□□□□ -2.28
CD46-215ENST00000488596 COX6A1P12074 109 aa0.78□□□□□ -2.28
CD46-215ENST00000488596 ERVS71-1P61550 626 aa0.78□□□□□ -2.28
CD46-215ENST00000488596 CCL7P80098 99 aa0.78□□□□□ -2.28
CD46-215ENST00000488596 BASP1P80723 227 aaKnown RBP0.78□□□□□ -2.28
CD46-215ENST00000488596 SPANXN5Q5MJ07 72 aa0.78□□□□□ -2.28
CD46-215ENST00000488596 OOSP2Q86WS3 158 aa0.78□□□□□ -2.28
CD46-215ENST00000488596 CCDC90BQ9GZT6 254 aa0.78□□□□□ -2.28
CD46-215ENST00000488596 TLNRD1Q9H1K6 362 aa0.78□□□□□ -2.28
CD46-215ENST00000488596 DCSTAMPQ9H295 470 aa0.78□□□□□ -2.28
CD46-215ENST00000488596 OSTCQ9NRP0 149 aa0.78□□□□□ -2.28
CD46-215ENST00000488596 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.78□□□□□ -2.28
CD46-215ENST00000488596 GLTPQ9NZD2 209 aa0.78□□□□□ -2.28
CD46-215ENST00000488596 CYSLTR1Q9Y271 337 aa0.78□□□□□ -2.28
CD46-215ENST00000488596 PIK3C2GO75747 1445 aa0.78□□□□□ -2.28
CD46-215ENST00000488596 KIF1BO60333 1816 aa0.78□□□□□ -2.29
CD46-215ENST00000488596 SCN10AQ9Y5Y9 1956 aa0.77□□□□□ -2.29
CD46-215ENST00000488596 hADV38S2A0JD32 116 aa0.77□□□□□ -2.29
CD46-215ENST00000488596 C1orf196B1AJZ1 125 aa0.77□□□□□ -2.29
CD46-215ENST00000488596 OR1I1O60431 355 aa0.77□□□□□ -2.29
CD46-215ENST00000488596 RBP1P09455 135 aa0.77□□□□□ -2.29
CD46-215ENST00000488596 S100A4P26447 101 aaKnown RBP0.77□□□□□ -2.29
CD46-215ENST00000488596 HSD11B1P28845 292 aa0.77□□□□□ -2.29
CD46-215ENST00000488596 ZNF93P35789 620 aaPredicted RBP0.77□□□□□ -2.29
CD46-215ENST00000488596 MRPS25P82663 173 aaKnown RBP0.77□□□□□ -2.29
CD46-215ENST00000488596 PRB3Q04118 309 aaPredicted RBP0.77□□□□□ -2.29
CD46-215ENST00000488596 EDDM3AQ14507 147 aa0.77□□□□□ -2.29
CD46-215ENST00000488596 TMED2Q15363 201 aa0.77□□□□□ -2.29
CD46-215ENST00000488596 SPA17Q15506 151 aa0.77□□□□□ -2.29
CD46-215ENST00000488596 C12orf74Q32Q52 190 aa0.77□□□□□ -2.29
CD46-215ENST00000488596 LINC01554Q52M75 96 aa0.77□□□□□ -2.29
CD46-215ENST00000488596 AKIRIN2Q53H80 203 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms