RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 HOXA1P49639 335 aaPredicted RBP10.66□□□□□ -0.7
COL9A2-208ENST00000488463 CCR6P51684 374 aa10.66□□□□□ -0.7
COL9A2-208ENST00000488463 ANKRD55Q3KP44 614 aa10.66□□□□□ -0.7
COL9A2-208ENST00000488463 Q56UQ5 140 aa10.66□□□□□ -0.7
COL9A2-208ENST00000488463 BTNL8Q6UX41 500 aa10.66□□□□□ -0.7
COL9A2-208ENST00000488463 LINC00322Q6ZN03 302 aaPredicted RBP10.66□□□□□ -0.7
COL9A2-208ENST00000488463 LRTM2Q8N967 370 aa10.66□□□□□ -0.7
COL9A2-208ENST00000488463 UBAC2Q8NBM4 344 aa10.66□□□□□ -0.7
COL9A2-208ENST00000488463 DUSP18Q8NEJ0 188 aa10.66□□□□□ -0.7
COL9A2-208ENST00000488463 PINX1Q96BK5 328 aaKnown RBP10.66□□□□□ -0.7
COL9A2-208ENST00000488463 OR10C1Q96KK4 312 aa10.66□□□□□ -0.7
COL9A2-208ENST00000488463 PDCD10Q9BUL8 212 aa10.66□□□□□ -0.7
COL9A2-208ENST00000488463 DAZ1Q9NQZ3 744 aaKnown RBP10.66□□□□□ -0.7
COL9A2-208ENST00000488463 U3KQK5 164 aa10.66□□□□□ -0.7
COL9A2-208ENST00000488463 IGHV3OR16-8A0A075B7F1 116 aa10.65□□□□□ -0.7
COL9A2-208ENST00000488463 H2AFB2P0C5Z0 115 aa10.65□□□□□ -0.7
COL9A2-208ENST00000488463 SULT1A3P0DMM9 295 aa10.65□□□□□ -0.7
COL9A2-208ENST00000488463 SULT1A4P0DMN0 295 aa10.65□□□□□ -0.7
COL9A2-208ENST00000488463 ANXA3P12429 323 aa10.65□□□□□ -0.7
COL9A2-208ENST00000488463 MLANAQ16655 118 aa10.65□□□□□ -0.7
COL9A2-208ENST00000488463 TMED4Q7Z7H5 227 aa10.65□□□□□ -0.7
COL9A2-208ENST00000488463 CENPSQ8N2Z9 138 aa10.65□□□□□ -0.7
COL9A2-208ENST00000488463 TM2D3Q9BRN9 247 aa10.65□□□□□ -0.7
COL9A2-208ENST00000488463 WFDC10AQ9H1F0 79 aa10.65□□□□□ -0.7
COL9A2-208ENST00000488463 GAR1Q9NY12 217 aaKnown RBP10.65□□□□□ -0.7
COL9A2-208ENST00000488463 HSPB7Q9UBY9 170 aa10.65□□□□□ -0.7
COL9A2-208ENST00000488463 C15orf62A8K5M9 175 aa10.64□□□□□ -0.71
COL9A2-208ENST00000488463 PITX3O75364 302 aa10.64□□□□□ -0.71
COL9A2-208ENST00000488463 CD81P60033 236 aa10.64□□□□□ -0.71
COL9A2-208ENST00000488463 UBE2MP61081 183 aaKnown RBP10.64□□□□□ -0.71
COL9A2-208ENST00000488463 SRPXP78539 464 aa10.64□□□□□ -0.71
COL9A2-208ENST00000488463 TNFRSF9Q07011 255 aa10.64□□□□□ -0.71
COL9A2-208ENST00000488463 PPP1R1AQ13522 171 aa10.64□□□□□ -0.71
COL9A2-208ENST00000488463 C2orf83Q53S99 150 aa10.64□□□□□ -0.71
COL9A2-208ENST00000488463 NRARPQ7Z6K4 114 aa10.64□□□□□ -0.71
COL9A2-208ENST00000488463 GTSCR1Q86UQ5 136 aa10.64□□□□□ -0.71
COL9A2-208ENST00000488463 LGI3Q8N145 548 aa10.64□□□□□ -0.71
COL9A2-208ENST00000488463 NEURL2Q9BR09 285 aa10.64□□□□□ -0.71
COL9A2-208ENST00000488463 TRAV25A0A0B4J276 109 aa10.63□□□□□ -0.71
COL9A2-208ENST00000488463 NUPL2O15504 423 aaKnown RBP10.63□□□□□ -0.71
COL9A2-208ENST00000488463 ZNF207O43670 478 aaKnown RBP10.63□□□□□ -0.71
COL9A2-208ENST00000488463 SFT2D2O95562 160 aa10.63□□□□□ -0.71
COL9A2-208ENST00000488463 TMEM50AO95807 157 aa10.63□□□□□ -0.71
COL9A2-208ENST00000488463 HTR2BP41595 481 aa10.63□□□□□ -0.71
COL9A2-208ENST00000488463 SUB1P53999 127 aaKnown RBP eCLIP10.63□□□□□ -0.71
COL9A2-208ENST00000488463 SMCO1Q147U7 214 aa10.63□□□□□ -0.71
COL9A2-208ENST00000488463 GUCA2BQ16661 112 aa10.63□□□□□ -0.71
COL9A2-208ENST00000488463 C20orf85Q9H1P6 137 aa10.63□□□□□ -0.71
COL9A2-208ENST00000488463 ZFAND3Q9H8U3 227 aa10.63□□□□□ -0.71
COL9A2-208ENST00000488463 GPN1Q9HCN4 374 aaPredicted RBP10.63□□□□□ -0.71
COL9A2-208ENST00000488463 HEYLQ9NQ87 328 aaPredicted RBP10.63□□□□□ -0.71
COL9A2-208ENST00000488463 NUDT15Q9NV35 164 aa10.63□□□□□ -0.71
COL9A2-208ENST00000488463 STARD9Q9P2P6 4700 aa10.63□□□□□ -0.71
COL9A2-208ENST00000488463 TRAV6A0A075B6T7 132 aa10.62□□□□□ -0.71
COL9A2-208ENST00000488463 A0A1B0GU03 582 aa10.62□□□□□ -0.71
COL9A2-208ENST00000488463 DUXBA0A1W2PPF3 345 aa10.62□□□□□ -0.71
COL9A2-208ENST00000488463 INMT-MINDY4F8WBC2 141 aa10.62□□□□□ -0.71
COL9A2-208ENST00000488463 CORTO00230 105 aa10.62□□□□□ -0.71
COL9A2-208ENST00000488463 GNG7O60262 68 aa10.62□□□□□ -0.71
COL9A2-208ENST00000488463 PRAF2O60831 178 aa10.62□□□□□ -0.71
COL9A2-208ENST00000488463 SCAF4O95104 1147 aaKnown RBP10.62□□□□□ -0.71
COL9A2-208ENST00000488463 NXPH3O95157 252 aa10.62□□□□□ -0.71
COL9A2-208ENST00000488463 NPBWR1P48145 328 aa10.62□□□□□ -0.71
COL9A2-208ENST00000488463 RELQ04864 619 aaPredicted RBP10.62□□□□□ -0.71
COL9A2-208ENST00000488463 HAGHQ16775 308 aa10.62□□□□□ -0.71
COL9A2-208ENST00000488463 C4orf46Q504U0 113 aa10.62□□□□□ -0.71
COL9A2-208ENST00000488463 TOMM20LQ6UXN7 152 aa10.62□□□□□ -0.71
COL9A2-208ENST00000488463 DEFB125Q8N687 156 aa10.62□□□□□ -0.71
COL9A2-208ENST00000488463 OR4X1Q8NH49 305 aa10.62□□□□□ -0.71
COL9A2-208ENST00000488463 WWC2-AS2Q96NR7 200 aa10.62□□□□□ -0.71
COL9A2-208ENST00000488463 C20orf24Q9BUV8 137 aa10.62□□□□□ -0.71
COL9A2-208ENST00000488463 ENY2Q9NPA8 101 aa10.62□□□□□ -0.71
COL9A2-208ENST00000488463 SMPXQ9UHP9 88 aa10.62□□□□□ -0.71
COL9A2-208ENST00000488463 FLVCR2Q9UPI3 526 aa10.62□□□□□ -0.71
COL9A2-208ENST00000488463 IGHV7-4-1A0A0J9YVY3 117 aa10.61□□□□□ -0.71
COL9A2-208ENST00000488463 RBMY1BA6NDE4 496 aaKnown RBP10.61□□□□□ -0.71
COL9A2-208ENST00000488463 RBMY1EA6NEQ0 496 aaKnown RBP10.61□□□□□ -0.71
COL9A2-208ENST00000488463 CEBPZOSA8MTT3 80 aa10.61□□□□□ -0.71
COL9A2-208ENST00000488463 TSPAN4O14817 238 aa10.61□□□□□ -0.71
COL9A2-208ENST00000488463 CLN5O75503 358 aa10.61□□□□□ -0.71
COL9A2-208ENST00000488463 IGKV1-17P01599 117 aa10.61□□□□□ -0.71
COL9A2-208ENST00000488463 RBMY1DP0C7P1 496 aaKnown RBP10.61□□□□□ -0.71
COL9A2-208ENST00000488463 VAMP1P23763 118 aa10.61□□□□□ -0.71
COL9A2-208ENST00000488463 SLC24A4Q8NFF2 622 aa10.61□□□□□ -0.71
COL9A2-208ENST00000488463 RBKSQ9H477 322 aa10.61□□□□□ -0.71
COL9A2-208ENST00000488463 CACFD1Q9UGQ2 172 aa10.61□□□□□ -0.71
COL9A2-208ENST00000488463 C9orf170A2RU37 121 aa10.6□□□□□ -0.71
COL9A2-208ENST00000488463 OR11H12B2RN74 326 aa10.6□□□□□ -0.71
COL9A2-208ENST00000488463 CHEK1O14757 476 aa10.6□□□□□ -0.71
COL9A2-208ENST00000488463 SLC25A6P12236 298 aa10.6□□□□□ -0.71
COL9A2-208ENST00000488463 OPRK1P41145 380 aa10.6□□□□□ -0.71
COL9A2-208ENST00000488463 FAM90A2PQ658T7 463 aa10.6□□□□□ -0.71
COL9A2-208ENST00000488463 PRSS54Q6PEW0 395 aa10.6□□□□□ -0.71
COL9A2-208ENST00000488463 ZNF600Q6ZNG1 722 aa10.6□□□□□ -0.71
COL9A2-208ENST00000488463 TMEM116Q8NCL8 245 aa10.6□□□□□ -0.71
COL9A2-208ENST00000488463 RNASEH2CQ8TDP1 164 aaKnown RBP10.6□□□□□ -0.71
COL9A2-208ENST00000488463 RCHY1Q96PM5 261 aa10.6□□□□□ -0.71
COL9A2-208ENST00000488463 CITED4Q96RK1 184 aa10.6□□□□□ -0.71
COL9A2-208ENST00000488463 MARVELD1Q9BSK0 173 aa10.6□□□□□ -0.71
COL9A2-208ENST00000488463 PUS1Q9Y606 427 aaKnown RBP eCLIP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms