RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 R4GMQ9 66 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 TRAV9-2A0A087WT02 112 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 A0A087WTM6 91 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 A0A0U1RQV1 116 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 SRRM4A7MD48 611 aaKnown RBP3.01□□□□□ -1.93
BRCA1-217ENST00000487825 H7C2Y5 167 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 ITGB1BP1O14713 200 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 SYT7O43581 403 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 NDUFS6O75380 124 aaKnown RBP3.01□□□□□ -1.93
BRCA1-217ENST00000487825 OR2J3O76001 311 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 KBTBD11O94819 623 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 DIRAS1O95057 198 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 CCNB2O95067 398 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 HBZP02008 142 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 IGKV1-16P04430 117 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 CTSDP07339 412 aaPredicted RBP3.01□□□□□ -1.93
BRCA1-217ENST00000487825 HTN3P15516 51 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 NQO2P16083 231 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 ATF1P18846 271 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 IFNGR2P38484 337 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 NUDT2P50583 147 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 HCCSP53701 268 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 CCL18P55774 89 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 LINC00315P59091 139 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 HERV-K104P63124 156 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 PJVKQ0ZLH3 352 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 GNMTQ14749 295 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 OXA1LQ15070 435 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 PTGES3Q15185 160 aaKnown RBP3.01□□□□□ -1.93
BRCA1-217ENST00000487825 P2RY14Q15391 338 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 MICAQ29983 383 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 SAMD4BQ5PRF9 694 aaKnown RBP3.01□□□□□ -1.93
BRCA1-217ENST00000487825 LY6G6FQ5SQ64 297 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 ELP2Q6IA86 826 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 CLEC19AQ6UXS0 136 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 UTS2BQ765I0 119 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 IFT20Q8IY31 132 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 CCDC54Q8NEL0 328 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 OR2T33Q8NG76 320 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 ENKURQ8TC29 256 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 PCNPQ8WW12 178 aaKnown RBP3.01□□□□□ -1.93
BRCA1-217ENST00000487825 PHB2Q99623 299 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 EBF4Q9BQW3 602 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 C20orf24Q9BUV8 137 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 TSSK6Q9BXA6 273 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 TTTY10Q9BZA0 68 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 YIPF3Q9GZM5 350 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 OR51V1Q9H2C8 321 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 IFI27L2Q9H2X8 130 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 JPT1Q9UK76 154 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 RPH3ALQ9UNE2 315 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 ING4Q9UNL4 249 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 ETV7Q9Y603 341 aa3.01□□□□□ -1.93
BRCA1-217ENST00000487825 SMCO3A2RU48 225 aa3□□□□□ -1.93
BRCA1-217ENST00000487825 AIPO00170 330 aa3□□□□□ -1.93
BRCA1-217ENST00000487825 DYNC1I1O14576 645 aa3□□□□□ -1.93
BRCA1-217ENST00000487825 YPEL1O60688 119 aa3□□□□□ -1.93
BRCA1-217ENST00000487825 CCDC22O60826 627 aa3□□□□□ -1.93
BRCA1-217ENST00000487825 GADD45GO95257 159 aa3□□□□□ -1.93
BRCA1-217ENST00000487825 SOX14O95416 240 aa3□□□□□ -1.93
BRCA1-217ENST00000487825 CST1P01037 141 aa3□□□□□ -1.93
BRCA1-217ENST00000487825 IGLV2-23P01705 113 aa3□□□□□ -1.93
BRCA1-217ENST00000487825 IGHV3-23P01764 117 aa3□□□□□ -1.93
BRCA1-217ENST00000487825 MT-ND4P03905 459 aa3□□□□□ -1.93
BRCA1-217ENST00000487825 SEMG1P04279 462 aa3□□□□□ -1.93
BRCA1-217ENST00000487825 PPP1CCP36873 323 aaKnown RBP3□□□□□ -1.93
BRCA1-217ENST00000487825 HSPA13P48723 471 aa3□□□□□ -1.93
BRCA1-217ENST00000487825 SMIM11AP58511 58 aa3□□□□□ -1.93
BRCA1-217ENST00000487825 POLR2GP62487 172 aaKnown RBP eCLIP3□□□□□ -1.93
BRCA1-217ENST00000487825 PIGYQ3MUY2 71 aa3□□□□□ -1.93
BRCA1-217ENST00000487825 C6orf183Q5T699 404 aa3□□□□□ -1.93
BRCA1-217ENST00000487825 DMKNQ6E0U4 476 aaPredicted RBP3□□□□□ -1.93
BRCA1-217ENST00000487825 PLEKHG7Q6ZR37 379 aa3□□□□□ -1.93
BRCA1-217ENST00000487825 RASSF6Q6ZTQ3 369 aa3□□□□□ -1.93
BRCA1-217ENST00000487825 SRSF12Q8WXF0 261 aaKnown RBP3□□□□□ -1.93
BRCA1-217ENST00000487825 ASB17Q8WXJ9 295 aa3□□□□□ -1.93
BRCA1-217ENST00000487825 PPP1R14BQ96C90 147 aa3□□□□□ -1.93
BRCA1-217ENST00000487825 ADAT3Q96EY9 351 aaPredicted RBP3□□□□□ -1.93
BRCA1-217ENST00000487825 PHYHIPLQ96FC7 376 aa3□□□□□ -1.93
BRCA1-217ENST00000487825 YPEL2Q96QA6 119 aa3□□□□□ -1.93
BRCA1-217ENST00000487825 NIPSNAP3BQ9BS92 247 aa3□□□□□ -1.93
BRCA1-217ENST00000487825 PRRG3Q9BZD7 231 aa3□□□□□ -1.93
BRCA1-217ENST00000487825 ZNF436Q9C0F3 470 aaPredicted RBP3□□□□□ -1.93
BRCA1-217ENST00000487825 OR2S2Q9NQN1 319 aa3□□□□□ -1.93
BRCA1-217ENST00000487825 DAZ1Q9NQZ3 744 aaKnown RBP3□□□□□ -1.93
BRCA1-217ENST00000487825 ARMC1Q9NVT9 282 aa3□□□□□ -1.93
BRCA1-217ENST00000487825 Q9UF83 564 aa3□□□□□ -1.93
BRCA1-217ENST00000487825 PSORS1C1Q9UIG5 152 aa3□□□□□ -1.93
BRCA1-217ENST00000487825 IKZF2Q9UKS7 526 aa3□□□□□ -1.93
BRCA1-217ENST00000487825 CSDC2Q9Y534 153 aaKnown RBP3□□□□□ -1.93
BRCA1-217ENST00000487825 TMEM189A5PLL7 270 aa2.99□□□□□ -1.93
BRCA1-217ENST00000487825 H0Y9J4 135 aa2.99□□□□□ -1.93
BRCA1-217ENST00000487825 RAB29O14966 203 aa2.99□□□□□ -1.93
BRCA1-217ENST00000487825 RS1O15537 224 aa2.99□□□□□ -1.93
BRCA1-217ENST00000487825 RPP14O95059 124 aaKnown RBP2.99□□□□□ -1.93
BRCA1-217ENST00000487825 C1QBP02746 253 aa2.99□□□□□ -1.93
BRCA1-217ENST00000487825 GSTT2P0CG29 244 aa2.99□□□□□ -1.93
BRCA1-217ENST00000487825 GSTT2BP0CG30 244 aa2.99□□□□□ -1.93
BRCA1-217ENST00000487825 SLC2A5P22732 501 aa2.99□□□□□ -1.93
BRCA1-217ENST00000487825 MAGEA2P43356 314 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms