RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 VCX3AQ9NNX9 186 aa6.24□□□□□ -1.41
PRKCB-208ENST00000487674 PUS1Q9Y606 427 aaKnown RBP eCLIP6.24□□□□□ -1.41
PRKCB-208ENST00000487674 U3KQE9 123 aa6.24□□□□□ -1.41
PRKCB-208ENST00000487674 SMIM31A0A1B0GVY4 71 aa6.23□□□□□ -1.41
PRKCB-208ENST00000487674 DNASE2O00115 360 aaPredicted RBP6.23□□□□□ -1.41
PRKCB-208ENST00000487674 SCGB2A1O75556 95 aa6.23□□□□□ -1.41
PRKCB-208ENST00000487674 APOHP02749 345 aaPredicted RBP6.23□□□□□ -1.41
PRKCB-208ENST00000487674 P0C879 139 aa6.23□□□□□ -1.41
PRKCB-208ENST00000487674 SNCAP37840 140 aa6.23□□□□□ -1.41
PRKCB-208ENST00000487674 AKR1C2P52895 323 aa6.23□□□□□ -1.41
PRKCB-208ENST00000487674 DEFB131AP59861 70 aa6.23□□□□□ -1.41
PRKCB-208ENST00000487674 RND3P61587 244 aa6.23□□□□□ -1.41
PRKCB-208ENST00000487674 LSM3P62310 102 aaKnown RBP6.23□□□□□ -1.41
PRKCB-208ENST00000487674 RPL11P62913 178 aaKnown RBP6.23□□□□□ -1.41
PRKCB-208ENST00000487674 IZUMO4Q1ZYL8 232 aa6.23□□□□□ -1.41
PRKCB-208ENST00000487674 TMEM41BQ5BJD5 291 aa6.23□□□□□ -1.41
PRKCB-208ENST00000487674 SPINK9Q5DT21 86 aa6.23□□□□□ -1.41
PRKCB-208ENST00000487674 LEMD1Q68G75 181 aa6.23□□□□□ -1.41
PRKCB-208ENST00000487674 PVRIGQ6DKI7 326 aa6.23□□□□□ -1.41
PRKCB-208ENST00000487674 SNX29P2Q8IUI4 249 aa6.23□□□□□ -1.41
PRKCB-208ENST00000487674 FAM24BQ8N5W8 94 aa6.23□□□□□ -1.41
PRKCB-208ENST00000487674 Q8NAQ8 132 aa6.23□□□□□ -1.41
PRKCB-208ENST00000487674 C2CD4CQ8TF44 421 aa6.23□□□□□ -1.41
PRKCB-208ENST00000487674 ZNF486Q96H40 463 aaPredicted RBP6.23□□□□□ -1.41
PRKCB-208ENST00000487674 HRH4Q9H3N8 390 aa6.23□□□□□ -1.41
PRKCB-208ENST00000487674 COMMD3Q9UBI1 195 aa6.23□□□□□ -1.41
PRKCB-208ENST00000487674 IGHV3-66A0A0C4DH42 116 aa6.22□□□□□ -1.41
PRKCB-208ENST00000487674 A0A1B0GU03 582 aa6.22□□□□□ -1.41
PRKCB-208ENST00000487674 A0A1W2PS18 150 aa6.22□□□□□ -1.41
PRKCB-208ENST00000487674 C11orf94C9JXX5 98 aa6.22□□□□□ -1.41
PRKCB-208ENST00000487674 M0QYG6 137 aa6.22□□□□□ -1.41
PRKCB-208ENST00000487674 DEFB4AO15263 64 aa6.22□□□□□ -1.41
PRKCB-208ENST00000487674 ATG12O94817 140 aa6.22□□□□□ -1.41
PRKCB-208ENST00000487674 IGKV1-5P01602 117 aa6.22□□□□□ -1.41
PRKCB-208ENST00000487674 RNASE2P10153 161 aaKnown RBP6.22□□□□□ -1.41
PRKCB-208ENST00000487674 PGAM2P15259 253 aa6.22□□□□□ -1.41
PRKCB-208ENST00000487674 HOXA1P49639 335 aaPredicted RBP6.22□□□□□ -1.41
PRKCB-208ENST00000487674 SUB1P53999 127 aaKnown RBP eCLIP6.22□□□□□ -1.41
PRKCB-208ENST00000487674 TRPT1Q86TN4 253 aaKnown RBP6.22□□□□□ -1.41
PRKCB-208ENST00000487674 STHQ8IWL8 128 aa6.22□□□□□ -1.41
PRKCB-208ENST00000487674 LILRB2Q8N423 598 aa6.22□□□□□ -1.41
PRKCB-208ENST00000487674 ARRDC1Q8N5I2 433 aa6.22□□□□□ -1.41
PRKCB-208ENST00000487674 GRAMD2BQ96HH9 432 aa6.22□□□□□ -1.41
PRKCB-208ENST00000487674 METTL26Q96S19 204 aa6.22□□□□□ -1.41
PRKCB-208ENST00000487674 PDCD10Q9BUL8 212 aa6.22□□□□□ -1.41
PRKCB-208ENST00000487674 KRTAP4-11Q9BYQ6 195 aa6.22□□□□□ -1.41
PRKCB-208ENST00000487674 RABAC1Q9UI14 185 aa6.22□□□□□ -1.41
PRKCB-208ENST00000487674 A0A087WXM4 84 aa6.21□□□□□ -1.42
PRKCB-208ENST00000487674 A0A0B4J293 547 aa6.21□□□□□ -1.42
PRKCB-208ENST00000487674 K7EQG2 157 aa6.21□□□□□ -1.42
PRKCB-208ENST00000487674 CLN5O75503 358 aa6.21□□□□□ -1.42
PRKCB-208ENST00000487674 TMEM50AO95807 157 aa6.21□□□□□ -1.42
PRKCB-208ENST00000487674 IFNA17P01571 189 aa6.21□□□□□ -1.42
PRKCB-208ENST00000487674 SPP1P10451 314 aa6.21□□□□□ -1.42
PRKCB-208ENST00000487674 MIFP14174 115 aa6.21□□□□□ -1.42
PRKCB-208ENST00000487674 ELK1P19419 428 aa6.21□□□□□ -1.42
PRKCB-208ENST00000487674 PI3P19957 117 aa6.21□□□□□ -1.42
PRKCB-208ENST00000487674 TBPP20226 339 aa6.21□□□□□ -1.42
PRKCB-208ENST00000487674 NPPCP23582 126 aa6.21□□□□□ -1.42
PRKCB-208ENST00000487674 CRYBB3P26998 211 aa6.21□□□□□ -1.42
PRKCB-208ENST00000487674 OPRK1P41145 380 aa6.21□□□□□ -1.42
PRKCB-208ENST00000487674 P2RY1P47900 373 aa6.21□□□□□ -1.42
PRKCB-208ENST00000487674 PIGPP57054 158 aa6.21□□□□□ -1.42
PRKCB-208ENST00000487674 NCS1P62166 190 aa6.21□□□□□ -1.42
PRKCB-208ENST00000487674 RNASE10Q5GAN6 216 aaKnown RBP6.21□□□□□ -1.42
PRKCB-208ENST00000487674 MORN3Q6PF18 240 aaPredicted RBP6.21□□□□□ -1.42
PRKCB-208ENST00000487674 LHFPL1Q86WI0 220 aa6.21□□□□□ -1.42
PRKCB-208ENST00000487674 STXBP6Q8NFX7 210 aa6.21□□□□□ -1.42
PRKCB-208ENST00000487674 OR4X1Q8NH49 305 aa6.21□□□□□ -1.42
PRKCB-208ENST00000487674 NARS2Q96I59 477 aaKnown RBP6.21□□□□□ -1.42
PRKCB-208ENST00000487674 TP53RKQ96S44 253 aa6.21□□□□□ -1.42
PRKCB-208ENST00000487674 ENY2Q9NPA8 101 aa6.21□□□□□ -1.42
PRKCB-208ENST00000487674 HECTD4Q9Y4D8 3996 aa6.21□□□□□ -1.42
PRKCB-208ENST00000487674 IGHV4-28A0A0C4DH34 117 aa6.2□□□□□ -1.42
PRKCB-208ENST00000487674 C3orf85A0A1B0GTC6 90 aa6.2□□□□□ -1.42
PRKCB-208ENST00000487674 ZNF705EA8MWA4 302 aaPredicted RBP6.2□□□□□ -1.42
PRKCB-208ENST00000487674 IGLL5B9A064 214 aa6.2□□□□□ -1.42
PRKCB-208ENST00000487674 HPGDSO60760 199 aa6.2□□□□□ -1.42
PRKCB-208ENST00000487674 B3GALNT1O75752 331 aa6.2□□□□□ -1.42
PRKCB-208ENST00000487674 TNFAIP8O95379 198 aa6.2□□□□□ -1.42
PRKCB-208ENST00000487674 GIG44P09565 113 aaPredicted RBP6.2□□□□□ -1.42
PRKCB-208ENST00000487674 ZNF688P0C7X2 276 aa6.2□□□□□ -1.42
PRKCB-208ENST00000487674 C4BPBP20851 252 aa6.2□□□□□ -1.42
PRKCB-208ENST00000487674 ETV6P41212 452 aa6.2□□□□□ -1.42
PRKCB-208ENST00000487674 RPL5P46777 297 aaKnown RBP6.2□□□□□ -1.42
PRKCB-208ENST00000487674 EIF2B2P49770 351 aaKnown RBP6.2□□□□□ -1.42
PRKCB-208ENST00000487674 PPP5CP53041 499 aa6.2□□□□□ -1.42
PRKCB-208ENST00000487674 TRIM16LQ309B1 348 aa6.2□□□□□ -1.42
PRKCB-208ENST00000487674 BSXQ3C1V8 233 aa6.2□□□□□ -1.42
PRKCB-208ENST00000487674 CCDC71LQ8N9Z2 235 aa6.2□□□□□ -1.42
PRKCB-208ENST00000487674 RNASE11Q8TAA1 199 aaKnown RBP6.2□□□□□ -1.42
PRKCB-208ENST00000487674 DCANP1Q8TF63 244 aa6.2□□□□□ -1.42
PRKCB-208ENST00000487674 RRNAD1Q96FB5 475 aaKnown RBP6.2□□□□□ -1.42
PRKCB-208ENST00000487674 FNDC4Q9H6D8 234 aaPredicted RBP6.2□□□□□ -1.42
PRKCB-208ENST00000487674 MRPL36Q9P0J6 103 aaKnown RBP6.2□□□□□ -1.42
PRKCB-208ENST00000487674 COPZ2Q9P299 210 aa6.2□□□□□ -1.42
PRKCB-208ENST00000487674 APLNQ9ULZ1 77 aa6.2□□□□□ -1.42
PRKCB-208ENST00000487674 AGRNO00468 2067 aa6.2□□□□□ -1.42
PRKCB-208ENST00000487674 HERC2O95714 4834 aa6.19□□□□□ -1.42
PRKCB-208ENST00000487674 TRAV30A0A087WSZ9 112 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms