RNA–Protein interactions for RNA: ENST00000486339.6

PKD1-219, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,443 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-219ENST00000486339 BRD3OSQ6XYD6 125 aa11.11□□□□□ -0.63
PKD1-219ENST00000486339 BIVMQ86UB2 503 aa11.11□□□□□ -0.63
PKD1-219ENST00000486339 C11orf42Q8N5U0 333 aa11.11□□□□□ -0.63
PKD1-219ENST00000486339 ZNF383Q8NA42 475 aa11.11□□□□□ -0.63
PKD1-219ENST00000486339 Q8TCH9 128 aa11.11□□□□□ -0.63
PKD1-219ENST00000486339 WDR83OSQ9Y284 106 aa11.11□□□□□ -0.63
PKD1-219ENST00000486339 ARFGEF3Q5TH69 2177 aa11.11□□□□□ -0.63
PKD1-219ENST00000486339 IGHV3-66A0A0C4DH42 116 aa11.11□□□□□ -0.63
PKD1-219ENST00000486339 MDKP21741 143 aaPredicted RBP11.11□□□□□ -0.63
PKD1-219ENST00000486339 DGAT2L7PQ6IED9 249 aa11.11□□□□□ -0.63
PKD1-219ENST00000486339 IGLV3-1P01715 115 aa11.1□□□□□ -0.63
PKD1-219ENST00000486339 SLC25A16P16260 332 aa11.1□□□□□ -0.63
PKD1-219ENST00000486339 FAM3BP58499 235 aaPredicted RBP11.1□□□□□ -0.63
PKD1-219ENST00000486339 IGKV1-6A0A0C4DH72 117 aa11.1□□□□□ -0.63
PKD1-219ENST00000486339 PRTN3P24158 256 aa11.1□□□□□ -0.63
PKD1-219ENST00000486339 G0S2P27469 103 aa11.1□□□□□ -0.63
PKD1-219ENST00000486339 LINC00205P59089 165 aa11.1□□□□□ -0.63
PKD1-219ENST00000486339 ERVK11-1P61568 191 aa11.1□□□□□ -0.63
PKD1-219ENST00000486339 SNRPD3P62318 126 aaKnown RBP11.1□□□□□ -0.63
PKD1-219ENST00000486339 MIR17HGQ75NE6 70 aa11.1□□□□□ -0.63
PKD1-219ENST00000486339 NAV2Q8IVL1 2488 aa11.1□□□□□ -0.63
PKD1-219ENST00000486339 OR5AL1P0C617 328 aa11.1□□□□□ -0.63
PKD1-219ENST00000486339 EFNB3Q15768 340 aa11.1□□□□□ -0.63
PKD1-219ENST00000486339 HIST1H2BAQ96A08 127 aa11.1□□□□□ -0.63
PKD1-219ENST00000486339 LINC00527Q9UJ94 153 aa11.1□□□□□ -0.63
PKD1-219ENST00000486339 H0YJW9 148 aa11.1□□□□□ -0.63
PKD1-219ENST00000486339 BUB1B-PAK6H3BSN5 160 aa11.1□□□□□ -0.63
PKD1-219ENST00000486339 CFHR2P36980 270 aa11.1□□□□□ -0.63
PKD1-219ENST00000486339 TMEM219Q86XT9 240 aa11.1□□□□□ -0.63
PKD1-219ENST00000486339 KLHDC1Q8N7A1 406 aa11.1□□□□□ -0.63
PKD1-219ENST00000486339 TMEM167AQ8TBQ9 72 aa11.1□□□□□ -0.63
PKD1-219ENST00000486339 RNF5Q99942 180 aa11.1□□□□□ -0.63
PKD1-219ENST00000486339 APCSP02743 223 aa11.09□□□□□ -0.63
PKD1-219ENST00000486339 DDB2Q92466 427 aa11.09□□□□□ -0.63
PKD1-219ENST00000486339 MOB4Q9Y3A3 225 aa11.09□□□□□ -0.63
PKD1-219ENST00000486339 CBY1Q9Y3M2 126 aa11.09□□□□□ -0.63
PKD1-219ENST00000486339 A0A087X0M5 115 aa11.09□□□□□ -0.63
PKD1-219ENST00000486339 A0A1B0GX30 115 aa11.09□□□□□ -0.63
PKD1-219ENST00000486339 CENPWQ5EE01 88 aa11.09□□□□□ -0.63
PKD1-219ENST00000486339 FAM209BQ5JX69 171 aa11.09□□□□□ -0.63
PKD1-219ENST00000486339 HIST1H1AQ02539 215 aaPredicted RBP11.09□□□□□ -0.63
PKD1-219ENST00000486339 IQCJQ1A5X6 159 aa11.09□□□□□ -0.63
PKD1-219ENST00000486339 DUX5Q96PT3 197 aa11.09□□□□□ -0.63
PKD1-219ENST00000486339 ELOVL1Q9BW60 279 aa11.09□□□□□ -0.63
PKD1-219ENST00000486339 PTPRSQ13332 1948 aa11.09□□□□□ -0.63
PKD1-219ENST00000486339 SPTBN4Q9H254 2564 aa11.09□□□□□ -0.63
PKD1-219ENST00000486339 H3BUX3 64 aa11.08□□□□□ -0.63
PKD1-219ENST00000486339 NDUFS8O00217 210 aa11.08□□□□□ -0.63
PKD1-219ENST00000486339 NPFFO15130 113 aa11.08□□□□□ -0.63
PKD1-219ENST00000486339 MT-ND6P03923 174 aa11.08□□□□□ -0.63
PKD1-219ENST00000486339 RPL29P47914 159 aaKnown RBP11.08□□□□□ -0.63
PKD1-219ENST00000486339 UQCRFS1P47985 274 aa11.08□□□□□ -0.63
PKD1-219ENST00000486339 TRAV3A0A0B4J244 114 aa11.08□□□□□ -0.64
PKD1-219ENST00000486339 AGAP20933 346 aa11.08□□□□□ -0.64
PKD1-219ENST00000486339 PVRIGQ6DKI7 326 aa11.08□□□□□ -0.64
PKD1-219ENST00000486339 FOXI3A8MTJ6 420 aaPredicted RBP11.08□□□□□ -0.64
PKD1-219ENST00000486339 GPX1P07203 203 aa11.08□□□□□ -0.64
PKD1-219ENST00000486339 OR1P1Q8NH06 330 aa11.08□□□□□ -0.64
PKD1-219ENST00000486339 RNF125Q96EQ8 232 aa11.08□□□□□ -0.64
PKD1-219ENST00000486339 JMJD8Q96S16 334 aa11.08□□□□□ -0.64
PKD1-219ENST00000486339 M0R2Z0 102 aa11.08□□□□□ -0.64
PKD1-219ENST00000486339 CX3CL1P78423 397 aa11.08□□□□□ -0.64
PKD1-219ENST00000486339 C5orf64Q2M2E5 130 aa11.08□□□□□ -0.64
PKD1-219ENST00000486339 RAX2Q96IS3 184 aa11.08□□□□□ -0.64
PKD1-219ENST00000486339 IGHV3OR16-12A0A075B7B8 117 aa11.07□□□□□ -0.64
PKD1-219ENST00000486339 TCRBV4S1A1TA0A5B7 111 aa11.07□□□□□ -0.64
PKD1-219ENST00000486339 SAPCD1Q5SSQ6 148 aa11.07□□□□□ -0.64
PKD1-219ENST00000486339 ZNF600Q6ZNG1 722 aa11.07□□□□□ -0.64
PKD1-219ENST00000486339 VAMP8Q9BV40 100 aa11.07□□□□□ -0.64
PKD1-219ENST00000486339 TRAV34A0A0B4J273 112 aa11.07□□□□□ -0.64
PKD1-219ENST00000486339 ITGB1BP1O14713 200 aa11.07□□□□□ -0.64
PKD1-219ENST00000486339 HLA-DRB1P01911 266 aa11.07□□□□□ -0.64
PKD1-219ENST00000486339 PRSS1P07477 247 aa11.07□□□□□ -0.64
PKD1-219ENST00000486339 GRNP28799 593 aaKnown RBP11.07□□□□□ -0.64
PKD1-219ENST00000486339 VDAC2P45880 294 aaPredicted RBP11.07□□□□□ -0.64
PKD1-219ENST00000486339 TWIST1Q15672 202 aa11.07□□□□□ -0.64
PKD1-219ENST00000486339 ANKRD11Q6UB99 2663 aaPredicted RBP11.07□□□□□ -0.64
PKD1-219ENST00000486339 IGKV3-20P01619 116 aa11.07□□□□□ -0.64
PKD1-219ENST00000486339 TSPOP30536 169 aa11.07□□□□□ -0.64
PKD1-219ENST00000486339 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.06□□□□□ -0.64
PKD1-219ENST00000486339 A8MXK9 166 aa11.06□□□□□ -0.64
PKD1-219ENST00000486339 ATP5G3P48201 142 aa11.06□□□□□ -0.64
PKD1-219ENST00000486339 C2orf83Q53S99 150 aa11.06□□□□□ -0.64
PKD1-219ENST00000486339 CD81P60033 236 aa11.06□□□□□ -0.64
PKD1-219ENST00000486339 RELBQ01201 579 aa11.06□□□□□ -0.64
PKD1-219ENST00000486339 DUX4L9Q6RFH8 374 aaPredicted RBP11.06□□□□□ -0.64
PKD1-219ENST00000486339 TMEM116Q8NCL8 245 aa11.06□□□□□ -0.64
PKD1-219ENST00000486339 WFDC1Q9HC57 220 aa11.06□□□□□ -0.64
PKD1-219ENST00000486339 ZNF343Q6P1L6 599 aa11.06□□□□□ -0.64
PKD1-219ENST00000486339 TBL2Q9Y4P3 447 aaKnown RBP11.06□□□□□ -0.64
PKD1-219ENST00000486339 TRAV41A0A0B4J266 112 aa11.06□□□□□ -0.64
PKD1-219ENST00000486339 J3QKU1 62 aa11.06□□□□□ -0.64
PKD1-219ENST00000486339 PEX7O00628 323 aa11.06□□□□□ -0.64
PKD1-219ENST00000486339 VENTXO95231 258 aa11.06□□□□□ -0.64
PKD1-219ENST00000486339 IGKV1-16P04430 117 aa11.06□□□□□ -0.64
PKD1-219ENST00000486339 SRP19P09132 144 aaKnown RBP11.06□□□□□ -0.64
PKD1-219ENST00000486339 ANOS1P23352 680 aa11.06□□□□□ -0.64
PKD1-219ENST00000486339 SAA4P35542 130 aa11.06□□□□□ -0.64
PKD1-219ENST00000486339 RPS20P60866 119 aaKnown RBP11.06□□□□□ -0.64
PKD1-219ENST00000486339 TREML4Q6UXN2 200 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms