RNA–Protein interactions for RNA: ENST00000481788.1

RBM28-205, Transcript of RNA binding motif protein 28, human

TSL 3

Gene RBM28, Length 1,052 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-205	ENST00000481788	MAPK3	P27361	379 aa	Predicted RBP	4.65	□□□□□ -1.67
RBM28-205	ENST00000481788	OXA1L	Q15070	435 aa		4.65	□□□□□ -1.67
RBM28-205	ENST00000481788	UBE2U	Q5VVX9	321 aa		4.65	□□□□□ -1.67
RBM28-205	ENST00000481788	TMEM80	Q96HE8	168 aa		4.65	□□□□□ -1.67
RBM28-205	ENST00000481788	GRAMD2B	Q96HH9	432 aa		4.65	□□□□□ -1.67
RBM28-205	ENST00000481788	HSD17B10	Q99714	261 aa	Known RBP	4.65	□□□□□ -1.67
RBM28-205	ENST00000481788	RNF167	Q9H6Y7	350 aa		4.65	□□□□□ -1.67
RBM28-205	ENST00000481788	NDUFA4L2	Q9NRX3	87 aa		4.65	□□□□□ -1.67
RBM28-205	ENST00000481788	SCN3B	Q9NY72	215 aa		4.65	□□□□□ -1.67
RBM28-205	ENST00000481788	ELF5	Q9UKW6	265 aa	Predicted RBP	4.65	□□□□□ -1.67
RBM28-205	ENST00000481788	SPATA2	Q9UM82	520 aa		4.65	□□□□□ -1.67
RBM28-205	ENST00000481788	TPRKB	Q9Y3C4	175 aa		4.65	□□□□□ -1.67
RBM28-205	ENST00000481788	IGHV3-66	A0A0C4DH42	116 aa		4.64	□□□□□ -1.67
RBM28-205	ENST00000481788	TMEM272	A0A1B0GTI8	110 aa		4.64	□□□□□ -1.67
RBM28-205	ENST00000481788	TEX50	A0A1B0GTY4	177 aa		4.64	□□□□□ -1.67
RBM28-205	ENST00000481788	EFCAB10	A6NFE3	127 aa		4.64	□□□□□ -1.67
RBM28-205	ENST00000481788	RBFOX2	O43251	390 aa	Known RBP eCLIP	4.64	□□□□□ -1.67
RBM28-205	ENST00000481788	HRAS	P01112	189 aa		4.64	□□□□□ -1.67
RBM28-205	ENST00000481788	CD5	P06127	495 aa		4.64	□□□□□ -1.67
RBM28-205	ENST00000481788	GNB3	P16520	340 aa		4.64	□□□□□ -1.67
RBM28-205	ENST00000481788	CD36	P16671	472 aa		4.64	□□□□□ -1.67
RBM28-205	ENST00000481788	MYL12A	P19105	171 aa		4.64	□□□□□ -1.67
RBM28-205	ENST00000481788	NFYA	P23511	347 aa	Predicted RBP	4.64	□□□□□ -1.67
RBM28-205	ENST00000481788	RPL5	P46777	297 aa	Known RBP	4.64	□□□□□ -1.67
RBM28-205	ENST00000481788	CLDN12	P56749	244 aa		4.64	□□□□□ -1.67
RBM28-205	ENST00000481788	PAFAH1B2	P68402	229 aa		4.64	□□□□□ -1.67
RBM28-205	ENST00000481788	C2orf76	Q3KRA6	126 aa		4.64	□□□□□ -1.67
RBM28-205	ENST00000481788	ACTL10	Q5JWF8	245 aa		4.64	□□□□□ -1.67
RBM28-205	ENST00000481788	SLC25A24	Q6NUK1	477 aa		4.64	□□□□□ -1.67
RBM28-205	ENST00000481788	TOMM20L	Q6UXN7	152 aa		4.64	□□□□□ -1.67
RBM28-205	ENST00000481788		Q6ZRN7	208 aa	Predicted RBP	4.64	□□□□□ -1.67
RBM28-205	ENST00000481788	CENPS	Q8N2Z9	138 aa		4.64	□□□□□ -1.67
RBM28-205	ENST00000481788	NRAC	Q8N912	160 aa		4.64	□□□□□ -1.67
RBM28-205	ENST00000481788	DUSP18	Q8NEJ0	188 aa		4.64	□□□□□ -1.67
RBM28-205	ENST00000481788	BPIFB6	Q8NFQ5	453 aa		4.64	□□□□□ -1.67
RBM28-205	ENST00000481788	OR56B1	Q8NGI3	324 aa		4.64	□□□□□ -1.67
RBM28-205	ENST00000481788	TCTEX1D2	Q8WW35	142 aa		4.64	□□□□□ -1.67
RBM28-205	ENST00000481788	GINS4	Q9BRT9	223 aa		4.64	□□□□□ -1.67
RBM28-205	ENST00000481788	DCSTAMP	Q9H295	470 aa		4.64	□□□□□ -1.67
RBM28-205	ENST00000481788	TAS2R8	Q9NYW2	309 aa		4.64	□□□□□ -1.67
RBM28-205	ENST00000481788	MDFIC	Q9P1T7	246 aa		4.64	□□□□□ -1.67
RBM28-205	ENST00000481788	RBM7	Q9Y580	266 aa	Known RBP	4.64	□□□□□ -1.67
RBM28-205	ENST00000481788		A0A1B0GU03	582 aa		4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	SMIM31	A0A1B0GVY4	71 aa		4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	CCDC160	A6NGH7	325 aa		4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	ST8SIA3	O43173	380 aa		4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	SLC22A5	O76082	557 aa		4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	ZNF688	P0C7X2	276 aa		4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	TRAPPC2	P0DI81	140 aa		4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	TRAPPC2B	P0DI82	140 aa		4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	HIST1H1D	P16402	221 aa	Known RBP	4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	FUS	P35637	526 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	WNT4	P56705	351 aa		4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	TAS2R31	P59538	309 aa		4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	REL	Q04864	619 aa	Predicted RBP	4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	ST3GAL4	Q11206	333 aa		4.63	□□□□□ -1.67
RBM28-205	ENST00000481788		Q56UQ5	140 aa		4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	FAM222A	Q5U5X8	452 aa		4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	THOC7	Q6I9Y2	204 aa	Known RBP	4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	TMEM91	Q6ZNR0	172 aa		4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	GPR141	Q7Z602	305 aa		4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	UBAC2	Q8NBM4	344 aa		4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	OR10R2	Q8NGX6	335 aa		4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	MPLKIP	Q8TAP9	179 aa		4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	FAM3D	Q96BQ1	224 aa		4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	RAB3C	Q96E17	227 aa		4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	CMTM3	Q96MX0	182 aa		4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	RAB40C	Q96S21	281 aa		4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	NIPSNAP3B	Q9BS92	247 aa		4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	COMMD5	Q9GZQ3	224 aa		4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	CCDC90B	Q9GZT6	254 aa		4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	NDUFA13	Q9P0J0	144 aa		4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	LSM2	Q9Y333	95 aa	Known RBP	4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	LINC00588	Q9Y4M8	146 aa		4.63	□□□□□ -1.67
RBM28-205	ENST00000481788	IRGM	A1A4Y4	181 aa		4.62	□□□□□ -1.67
RBM28-205	ENST00000481788	PTGES3L	E9PB15	166 aa		4.62	□□□□□ -1.67
RBM28-205	ENST00000481788		H3BMM0	161 aa		4.62	□□□□□ -1.67
RBM28-205	ENST00000481788	DNASE2	O00115	360 aa	Predicted RBP	4.62	□□□□□ -1.67
RBM28-205	ENST00000481788	NOL3	O60936	208 aa	Known RBP	4.62	□□□□□ -1.67
RBM28-205	ENST00000481788	YIF1A	O95070	293 aa		4.62	□□□□□ -1.67
RBM28-205	ENST00000481788	DTYMK	P23919	212 aa		4.62	□□□□□ -1.67
RBM28-205	ENST00000481788	FGF9	P31371	208 aa	Predicted RBP	4.62	□□□□□ -1.67
RBM28-205	ENST00000481788	ALDH3B2	P48448	385 aa		4.62	□□□□□ -1.67
RBM28-205	ENST00000481788	KRTAP10-1	P60331	282 aa		4.62	□□□□□ -1.67
RBM28-205	ENST00000481788	LRP2	P98164	4655 aa		4.62	□□□□□ -1.67
RBM28-205	ENST00000481788	MSMO1	Q15800	293 aa		4.62	□□□□□ -1.67
RBM28-205	ENST00000481788	NEDD8	Q15843	81 aa		4.62	□□□□□ -1.67
RBM28-205	ENST00000481788	RAB11B	Q15907	218 aa		4.62	□□□□□ -1.67
RBM28-205	ENST00000481788	HSD17B12	Q53GQ0	312 aa		4.62	□□□□□ -1.67
RBM28-205	ENST00000481788	AHSA2	Q719I0	299 aa		4.62	□□□□□ -1.67
RBM28-205	ENST00000481788	SPAG16	Q8N0X2	631 aa		4.62	□□□□□ -1.67
RBM28-205	ENST00000481788	CADM3	Q8N126	398 aa		4.62	□□□□□ -1.67
RBM28-205	ENST00000481788	MS4A15	Q8N5U1	240 aa		4.62	□□□□□ -1.67
RBM28-205	ENST00000481788	ZNF709	Q8N972	641 aa		4.62	□□□□□ -1.67
RBM28-205	ENST00000481788	OR1P1	Q8NH06	330 aa		4.62	□□□□□ -1.67
RBM28-205	ENST00000481788	LSM10	Q969L4	123 aa	Known RBP	4.62	□□□□□ -1.67
RBM28-205	ENST00000481788	TXN2	Q99757	166 aa		4.62	□□□□□ -1.67
RBM28-205	ENST00000481788	HRASLS	Q9HDD0	168 aa		4.62	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms