RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 OR4A16Q8NH70 328 aa9.51□□□□□ -0.89
NDC1-202ENST00000480952 NIPSNAP3BQ9BS92 247 aa9.51□□□□□ -0.89
NDC1-202ENST00000480952 YTHDF1Q9BYJ9 559 aaKnown RBP9.51□□□□□ -0.89
NDC1-202ENST00000480952 TRAV18A0A075B6X5 111 aa9.5□□□□□ -0.89
NDC1-202ENST00000480952 TRDV1A0A1B0GX56 115 aa9.5□□□□□ -0.89
NDC1-202ENST00000480952 HELTA6NFD8 242 aa9.5□□□□□ -0.89
NDC1-202ENST00000480952 SMIM9A6NGZ8 99 aa9.5□□□□□ -0.89
NDC1-202ENST00000480952 NOTOA8MTQ0 251 aa9.5□□□□□ -0.89
NDC1-202ENST00000480952 CRYBB3P26998 211 aa9.5□□□□□ -0.89
NDC1-202ENST00000480952 FAM3BP58499 235 aaPredicted RBP9.5□□□□□ -0.89
NDC1-202ENST00000480952 TBCEQ15813 527 aaPredicted RBP9.5□□□□□ -0.89
NDC1-202ENST00000480952 KCTD21Q4G0X4 260 aa9.5□□□□□ -0.89
NDC1-202ENST00000480952 C22orf42Q6IC83 251 aa9.5□□□□□ -0.89
NDC1-202ENST00000480952 CMTM1Q8IZ96 169 aa9.5□□□□□ -0.89
NDC1-202ENST00000480952 C6orf223Q8N319 242 aa9.5□□□□□ -0.89
NDC1-202ENST00000480952 OR5AP2Q8NGF4 316 aa9.5□□□□□ -0.89
NDC1-202ENST00000480952 TMEM230Q96A57 120 aa9.5□□□□□ -0.89
NDC1-202ENST00000480952 NEU1Q99519 415 aa9.5□□□□□ -0.89
NDC1-202ENST00000480952 DAPK2Q9UIK4 370 aa9.5□□□□□ -0.89
NDC1-202ENST00000480952 IGHV3OR16-12A0A075B7B8 117 aa9.49□□□□□ -0.89
NDC1-202ENST00000480952 TEX48A0A1B0GUV7 120 aa9.49□□□□□ -0.89
NDC1-202ENST00000480952 PPP5CP53041 499 aa9.49□□□□□ -0.89
NDC1-202ENST00000480952 PRCDQ00LT1 54 aa9.49□□□□□ -0.89
NDC1-202ENST00000480952 FAM222AQ5U5X8 452 aa9.49□□□□□ -0.89
NDC1-202ENST00000480952 TMEM88Q6PEY1 159 aa9.49□□□□□ -0.89
NDC1-202ENST00000480952 ZNF705AQ6ZN79 300 aaPredicted RBP9.49□□□□□ -0.89
NDC1-202ENST00000480952 ATG101Q9BSB4 218 aa9.49□□□□□ -0.89
NDC1-202ENST00000480952 RHBDL2Q9NX52 303 aa9.49□□□□□ -0.89
NDC1-202ENST00000480952 DKK2Q9UBU2 259 aa9.49□□□□□ -0.89
NDC1-202ENST00000480952 RFNGQ9Y644 331 aa9.49□□□□□ -0.89
NDC1-202ENST00000480952 H3BMM0 161 aa9.48□□□□□ -0.89
NDC1-202ENST00000480952 SNCAP37840 140 aa9.48□□□□□ -0.89
NDC1-202ENST00000480952 AP2S1P53680 142 aaPredicted RBP9.48□□□□□ -0.89
NDC1-202ENST00000480952 SNRPD3P62318 126 aaKnown RBP9.48□□□□□ -0.89
NDC1-202ENST00000480952 H2BFWTQ7Z2G1 175 aa9.48□□□□□ -0.89
NDC1-202ENST00000480952 SPATA12Q7Z6I5 190 aa9.48□□□□□ -0.89
NDC1-202ENST00000480952 LGALS14Q8TCE9 139 aa9.48□□□□□ -0.89
NDC1-202ENST00000480952 NDUFB11Q9NX14 153 aa9.48□□□□□ -0.89
NDC1-202ENST00000480952 NBDYA0A0U1RRE5 68 aa9.47□□□□□ -0.89
NDC1-202ENST00000480952 ZNF705FA8MVS1 300 aaPredicted RBP9.47□□□□□ -0.89
NDC1-202ENST00000480952 SCGB2A1O75556 95 aa9.47□□□□□ -0.89
NDC1-202ENST00000480952 ZNF705DP0CH99 300 aaPredicted RBP9.47□□□□□ -0.89
NDC1-202ENST00000480952 ZNF705BP0CI00 300 aaPredicted RBP9.47□□□□□ -0.89
NDC1-202ENST00000480952 PSMB9P28065 219 aa9.47□□□□□ -0.89
NDC1-202ENST00000480952 HSPE1P61604 102 aaKnown RBP9.47□□□□□ -0.89
NDC1-202ENST00000480952 DHRS11Q6UWP2 260 aa9.47□□□□□ -0.89
NDC1-202ENST00000480952 SPARTQ8N0X7 666 aa9.47□□□□□ -0.89
NDC1-202ENST00000480952 FCGR1BQ92637 280 aa9.47□□□□□ -0.89
NDC1-202ENST00000480952 ZNF2Q9BSG1 426 aaPredicted RBP9.47□□□□□ -0.89
NDC1-202ENST00000480952 EHFQ9NZC4 300 aa9.47□□□□□ -0.89
NDC1-202ENST00000480952 MEIS3P1A6NDR6 274 aa9.46□□□□□ -0.9
NDC1-202ENST00000480952 GPR31O00270 319 aa9.46□□□□□ -0.9
NDC1-202ENST00000480952 CLN5O75503 358 aa9.46□□□□□ -0.9
NDC1-202ENST00000480952 CBX5P45973 191 aa9.46□□□□□ -0.9
NDC1-202ENST00000480952 OXA1LQ15070 435 aa9.46□□□□□ -0.9
NDC1-202ENST00000480952 SPINK9Q5DT21 86 aa9.46□□□□□ -0.9
NDC1-202ENST00000480952 EPM2AB3EWF7 344 aa9.45□□□□□ -0.9
NDC1-202ENST00000480952 FAM90A26D6RGX4 464 aa9.45□□□□□ -0.9
NDC1-202ENST00000480952 IGKV3-20P01619 116 aa9.45□□□□□ -0.9
NDC1-202ENST00000480952 RFX2P48378 723 aa9.45□□□□□ -0.9
NDC1-202ENST00000480952 SUB1P53999 127 aaKnown RBP eCLIP9.45□□□□□ -0.9
NDC1-202ENST00000480952 FXYD7P58549 80 aa9.45□□□□□ -0.9
NDC1-202ENST00000480952 GSG1LQ6UXU4 331 aa9.45□□□□□ -0.9
NDC1-202ENST00000480952 C15orf53Q8NAA6 179 aa9.45□□□□□ -0.9
NDC1-202ENST00000480952 SEC22AQ96IW7 307 aa9.45□□□□□ -0.9
NDC1-202ENST00000480952 AUNIPQ9H7T9 357 aa9.45□□□□□ -0.9
NDC1-202ENST00000480952 IFT46Q9NQC8 304 aa9.45□□□□□ -0.9
NDC1-202ENST00000480952 DMBT1Q9UGM3 2413 aaPredicted RBP9.44□□□□□ -0.9
NDC1-202ENST00000480952 A0A0A6YYH2 397 aa9.44□□□□□ -0.9
NDC1-202ENST00000480952 A6NJ64 397 aa9.44□□□□□ -0.9
NDC1-202ENST00000480952 CORTO00230 105 aa9.44□□□□□ -0.9
NDC1-202ENST00000480952 TNFAIP8O95379 198 aa9.44□□□□□ -0.9
NDC1-202ENST00000480952 PMP2P02689 132 aa9.44□□□□□ -0.9
NDC1-202ENST00000480952 HLA-DRB4P13762 266 aa9.44□□□□□ -0.9
NDC1-202ENST00000480952 S100GP29377 79 aa9.44□□□□□ -0.9
NDC1-202ENST00000480952 DAD1P61803 113 aa9.44□□□□□ -0.9
NDC1-202ENST00000480952 NEDD8Q15843 81 aa9.44□□□□□ -0.9
NDC1-202ENST00000480952 TIGITQ495A1 244 aa9.44□□□□□ -0.9
NDC1-202ENST00000480952 PHLDA2Q53GA4 152 aa9.44□□□□□ -0.9
NDC1-202ENST00000480952 SFXN4Q6P4A7 337 aa9.44□□□□□ -0.9
NDC1-202ENST00000480952 C16orf54Q6UWD8 224 aa9.44□□□□□ -0.9
NDC1-202ENST00000480952 OR4X1Q8NH49 305 aa9.44□□□□□ -0.9
NDC1-202ENST00000480952 GLMPQ8WWB7 406 aa9.44□□□□□ -0.9
NDC1-202ENST00000480952 SEPSECSQ9HD40 501 aaKnown RBP9.44□□□□□ -0.9
NDC1-202ENST00000480952 DIABLOQ9NR28 239 aa9.44□□□□□ -0.9
NDC1-202ENST00000480952 MRPL36Q9P0J6 103 aaKnown RBP9.44□□□□□ -0.9
NDC1-202ENST00000480952 U3KQE9 123 aa9.44□□□□□ -0.9
NDC1-202ENST00000480952 HLA-DRB4X5D2U9 266 aa9.44□□□□□ -0.9
NDC1-202ENST00000480952 HBE1P02100 147 aa9.43□□□□□ -0.9
NDC1-202ENST00000480952 HNRNPCP07910 306 aaKnown RBP eCLIP9.43□□□□□ -0.9
NDC1-202ENST00000480952 INAFM2P0DMQ5 153 aa9.43□□□□□ -0.9
NDC1-202ENST00000480952 OPRK1P41145 380 aa9.43□□□□□ -0.9
NDC1-202ENST00000480952 HOXA1P49639 335 aaPredicted RBP9.43□□□□□ -0.9
NDC1-202ENST00000480952 MLANAQ16655 118 aa9.43□□□□□ -0.9
NDC1-202ENST00000480952 SLC35G3Q8N808 338 aa9.43□□□□□ -0.9
NDC1-202ENST00000480952 OR5H6Q8NGV6 325 aa9.43□□□□□ -0.9
NDC1-202ENST00000480952 ZNRF2Q8NHG8 242 aa9.43□□□□□ -0.9
NDC1-202ENST00000480952 SLC25A38Q96DW6 304 aa9.43□□□□□ -0.9
NDC1-202ENST00000480952 VCX3AQ9NNX9 186 aa9.43□□□□□ -0.9
NDC1-202ENST00000480952 NRN1Q9NPD7 142 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms