RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 UQCC1Q9NVA1 299 aa13.11□□□□□ -0.31
SCAMP3-207ENST00000480219 LSM4Q9Y4Z0 139 aaKnown RBP13.11□□□□□ -0.31
SCAMP3-207ENST00000480219 C2CD3Q4AC94 2353 aa13.11□□□□□ -0.31
SCAMP3-207ENST00000480219 A0A1B0GUS0 222 aa13.1□□□□□ -0.31
SCAMP3-207ENST00000480219 OR2J3O76001 311 aa13.1□□□□□ -0.31
SCAMP3-207ENST00000480219 RAB9AP51151 201 aa13.1□□□□□ -0.31
SCAMP3-207ENST00000480219 PROK1P58294 105 aa13.1□□□□□ -0.31
SCAMP3-207ENST00000480219 OPCMLQ14982 345 aa13.1□□□□□ -0.31
SCAMP3-207ENST00000480219 MLANAQ16655 118 aa13.1□□□□□ -0.31
SCAMP3-207ENST00000480219 TMEM144Q7Z5S9 345 aa13.1□□□□□ -0.31
SCAMP3-207ENST00000480219 LILRB2Q8N423 598 aa13.1□□□□□ -0.31
SCAMP3-207ENST00000480219 THAP8Q8NA92 274 aa13.1□□□□□ -0.31
SCAMP3-207ENST00000480219 OR4X1Q8NH49 305 aa13.1□□□□□ -0.31
SCAMP3-207ENST00000480219 STOML3Q8TAV4 291 aa13.1□□□□□ -0.31
SCAMP3-207ENST00000480219 SCARB1Q8WTV0 552 aa13.1□□□□□ -0.31
SCAMP3-207ENST00000480219 TAF15Q92804 592 aaKnown RBP eCLIP13.1□□□□□ -0.31
SCAMP3-207ENST00000480219 CXorf58Q96LI9 332 aa13.1□□□□□ -0.31
SCAMP3-207ENST00000480219 TXN2Q99757 166 aa13.1□□□□□ -0.31
SCAMP3-207ENST00000480219 KLK15Q9H2R5 256 aa13.1□□□□□ -0.31
SCAMP3-207ENST00000480219 NPVFQ9HCQ7 196 aa13.1□□□□□ -0.31
SCAMP3-207ENST00000480219 FBXL7Q9UJT9 491 aa13.1□□□□□ -0.31
SCAMP3-207ENST00000480219 WDR83OSQ9Y284 106 aa13.1□□□□□ -0.31
SCAMP3-207ENST00000480219 KANTRA0A1W2PQU2 76 aa13.09□□□□□ -0.31
SCAMP3-207ENST00000480219 CLPSL1A2RUU4 121 aa13.09□□□□□ -0.31
SCAMP3-207ENST00000480219 F8W735 103 aaPredicted RBP13.09□□□□□ -0.31
SCAMP3-207ENST00000480219 JTBO76095 146 aa13.09□□□□□ -0.31
SCAMP3-207ENST00000480219 TRGV3P03979 118 aa13.09□□□□□ -0.31
SCAMP3-207ENST00000480219 CLINT1Q14677 625 aa13.09□□□□□ -0.31
SCAMP3-207ENST00000480219 C10orf99Q6UWK7 81 aa13.09□□□□□ -0.31
SCAMP3-207ENST00000480219 TREML4Q6UXN2 200 aa13.09□□□□□ -0.31
SCAMP3-207ENST00000480219 ZNF329Q86UD4 541 aa13.09□□□□□ -0.31
SCAMP3-207ENST00000480219 KLHDC1Q8N7A1 406 aa13.09□□□□□ -0.31
SCAMP3-207ENST00000480219 WFDC12Q8WWY7 111 aa13.09□□□□□ -0.31
SCAMP3-207ENST00000480219 SLC35E1Q96K37 410 aa13.09□□□□□ -0.31
SCAMP3-207ENST00000480219 MRPL36Q9P0J6 103 aaKnown RBP13.09□□□□□ -0.31
SCAMP3-207ENST00000480219 A0A0G2JLM5 398 aa13.08□□□□□ -0.32
SCAMP3-207ENST00000480219 MFSD2BA6NFX1 497 aa13.08□□□□□ -0.32
SCAMP3-207ENST00000480219 MPDU1O75352 247 aa13.08□□□□□ -0.32
SCAMP3-207ENST00000480219 PF4V1P10720 104 aa13.08□□□□□ -0.32
SCAMP3-207ENST00000480219 C15orf32Q32M92 178 aa13.08□□□□□ -0.32
SCAMP3-207ENST00000480219 RPL7L1Q6DKI1 246 aaKnown RBP13.08□□□□□ -0.32
SCAMP3-207ENST00000480219 CENPVQ7Z7K6 275 aaPredicted RBP13.08□□□□□ -0.32
SCAMP3-207ENST00000480219 SLC51BQ86UW2 128 aa13.08□□□□□ -0.32
SCAMP3-207ENST00000480219 ZNF502Q8TBZ5 544 aa13.08□□□□□ -0.32
SCAMP3-207ENST00000480219 SMIM3Q9BZL3 60 aa13.08□□□□□ -0.32
SCAMP3-207ENST00000480219 WDR61Q9GZS3 305 aaKnown RBP13.08□□□□□ -0.32
SCAMP3-207ENST00000480219 ZNF355PQ9NSJ1 428 aa13.08□□□□□ -0.32
SCAMP3-207ENST00000480219 C21orf62Q9NYP8 219 aa13.08□□□□□ -0.32
SCAMP3-207ENST00000480219 IGKV1OR2-108A0A075B7D4 117 aa13.07□□□□□ -0.32
SCAMP3-207ENST00000480219 TRBV7-1A0A0A6YYK4 115 aa13.07□□□□□ -0.32
SCAMP3-207ENST00000480219 MFAP4P55083 255 aa13.07□□□□□ -0.32
SCAMP3-207ENST00000480219 TPPP2P59282 170 aa13.07□□□□□ -0.32
SCAMP3-207ENST00000480219 FAM209BQ5JX69 171 aa13.07□□□□□ -0.32
SCAMP3-207ENST00000480219 MS4A10Q96PG2 267 aa13.07□□□□□ -0.32
SCAMP3-207ENST00000480219 BOLA1Q9Y3E2 137 aa13.07□□□□□ -0.32
SCAMP3-207ENST00000480219 IGKV1D-37A0A075B6S9 117 aa13.06□□□□□ -0.32
SCAMP3-207ENST00000480219 BORCS7-ASMTA0A0B4J1R7 106 aa13.06□□□□□ -0.32
SCAMP3-207ENST00000480219 CLN5O75503 358 aa13.06□□□□□ -0.32
SCAMP3-207ENST00000480219 IFNA5P01569 189 aa13.06□□□□□ -0.32
SCAMP3-207ENST00000480219 NPBWR1P48145 328 aa13.06□□□□□ -0.32
SCAMP3-207ENST00000480219 RND2P52198 227 aa13.06□□□□□ -0.32
SCAMP3-207ENST00000480219 SRSF2Q01130 221 aaKnown RBP13.06□□□□□ -0.32
SCAMP3-207ENST00000480219 ATP5G2Q06055 141 aa13.06□□□□□ -0.32
SCAMP3-207ENST00000480219 TCTEX1D4Q5JR98 221 aa13.06□□□□□ -0.32
SCAMP3-207ENST00000480219 ZNF343Q6P1L6 599 aa13.06□□□□□ -0.32
SCAMP3-207ENST00000480219 TEPPQ6URK8 271 aa13.06□□□□□ -0.32
SCAMP3-207ENST00000480219 ZNF491Q8N8L2 437 aa13.06□□□□□ -0.32
SCAMP3-207ENST00000480219 OR5AU1Q8NGC0 362 aa13.06□□□□□ -0.32
SCAMP3-207ENST00000480219 NPIPB3Q92617 1050 aa13.06□□□□□ -0.32
SCAMP3-207ENST00000480219 EEF1AKMT3Q96AZ1 226 aa13.06□□□□□ -0.32
SCAMP3-207ENST00000480219 UBE2E2Q96LR5 201 aa13.06□□□□□ -0.32
SCAMP3-207ENST00000480219 GINS3Q9BRX5 216 aa13.06□□□□□ -0.32
SCAMP3-207ENST00000480219 GAR1Q9NY12 217 aaKnown RBP13.06□□□□□ -0.32
SCAMP3-207ENST00000480219 RNF114Q9Y508 228 aa13.06□□□□□ -0.32
SCAMP3-207ENST00000480219 JMJD1CQ15652 2540 aa13.06□□□□□ -0.32
SCAMP3-207ENST00000480219 UBE2L5PA0A1B0GUS4 154 aa13.05□□□□□ -0.32
SCAMP3-207ENST00000480219 IGLC1P0CG04 106 aa13.05□□□□□ -0.32
SCAMP3-207ENST00000480219 EIF5AP63241 154 aaKnown RBP13.05□□□□□ -0.32
SCAMP3-207ENST00000480219 ACSM6Q6P461 480 aa13.05□□□□□ -0.32
SCAMP3-207ENST00000480219 PRIMA1Q86XR5 153 aa13.05□□□□□ -0.32
SCAMP3-207ENST00000480219 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.05□□□□□ -0.32
SCAMP3-207ENST00000480219 OR4X2Q8NGF9 303 aa13.05□□□□□ -0.32
SCAMP3-207ENST00000480219 CCDC140Q96MF4 163 aa13.05□□□□□ -0.32
SCAMP3-207ENST00000480219 TRGV9Q99603 122 aa13.05□□□□□ -0.32
SCAMP3-207ENST00000480219 ZNF471Q9BX82 626 aaPredicted RBP13.05□□□□□ -0.32
SCAMP3-207ENST00000480219 TIMM9Q9Y5J7 89 aa13.05□□□□□ -0.32
SCAMP3-207ENST00000480219 TRAV30A0A087WSZ9 112 aa13.04□□□□□ -0.32
SCAMP3-207ENST00000480219 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.04□□□□□ -0.32
SCAMP3-207ENST00000480219 IGHV3-21A0A0B4J1V1 117 aa13.04□□□□□ -0.32
SCAMP3-207ENST00000480219 IGHV3-48P01763 117 aa13.04□□□□□ -0.32
SCAMP3-207ENST00000480219 RPLP1P05386 114 aaKnown RBP13.04□□□□□ -0.32
SCAMP3-207ENST00000480219 CDX1P47902 265 aaPredicted RBP13.04□□□□□ -0.32
SCAMP3-207ENST00000480219 DEFA5Q01523 94 aa13.04□□□□□ -0.32
SCAMP3-207ENST00000480219 AKR1C1Q04828 323 aa13.04□□□□□ -0.32
SCAMP3-207ENST00000480219 FOXL1Q12952 345 aa13.04□□□□□ -0.32
SCAMP3-207ENST00000480219 BTNL8Q6UX41 500 aa13.04□□□□□ -0.32
SCAMP3-207ENST00000480219 ACY3Q96HD9 319 aa13.04□□□□□ -0.32
SCAMP3-207ENST00000480219 MGST2Q99735 147 aa13.04□□□□□ -0.32
SCAMP3-207ENST00000480219 IGKV1-17P01599 117 aa13.03□□□□□ -0.32
SCAMP3-207ENST00000480219 TPT1P13693 172 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms