RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 RASL11BQ9BPW5 248 aa11.43□□□□□ -0.58
CLDN18-203ENST00000479660 ZFP92A6NM28 416 aa11.43□□□□□ -0.58
CLDN18-203ENST00000479660 TGFAP01135 160 aa11.43□□□□□ -0.58
CLDN18-203ENST00000479660 CRYGCP07315 174 aa11.43□□□□□ -0.58
CLDN18-203ENST00000479660 LINC00869P0C866 280 aa11.43□□□□□ -0.58
CLDN18-203ENST00000479660 GATA2P23769 480 aaPredicted RBP11.43□□□□□ -0.58
CLDN18-203ENST00000479660 NDPQ00604 133 aa11.43□□□□□ -0.58
CLDN18-203ENST00000479660 MEGF9Q9H1U4 602 aa11.43□□□□□ -0.58
CLDN18-203ENST00000479660 MRPL36Q9P0J6 103 aaKnown RBP11.43□□□□□ -0.58
CLDN18-203ENST00000479660 DMRT1Q9Y5R6 373 aa11.43□□□□□ -0.58
CLDN18-203ENST00000479660 IGHV3-21A0A0B4J1V1 117 aa11.42□□□□□ -0.58
CLDN18-203ENST00000479660 MT-CO2P00403 227 aa11.42□□□□□ -0.58
CLDN18-203ENST00000479660 RND2P52198 227 aa11.42□□□□□ -0.58
CLDN18-203ENST00000479660 ZNF506Q5JVG8 444 aa11.42□□□□□ -0.58
CLDN18-203ENST00000479660 MBD6Q96DN6 1003 aa11.42□□□□□ -0.58
CLDN18-203ENST00000479660 SLC35B3Q9H1N7 401 aa11.42□□□□□ -0.58
CLDN18-203ENST00000479660 TMPRSS5Q9H3S3 457 aa11.42□□□□□ -0.58
CLDN18-203ENST00000479660 CARHSP1Q9Y2V2 147 aaKnown RBP11.42□□□□□ -0.58
CLDN18-203ENST00000479660 IGHV7-81A0A0B4J1V7 117 aa11.42□□□□□ -0.58
CLDN18-203ENST00000479660 HLA-DRB1P01911 266 aa11.42□□□□□ -0.58
CLDN18-203ENST00000479660 ICAM4Q14773 271 aa11.42□□□□□ -0.58
CLDN18-203ENST00000479660 KHDC3LQ587J8 217 aa11.42□□□□□ -0.58
CLDN18-203ENST00000479660 KLF17Q5JT82 389 aaPredicted RBP11.42□□□□□ -0.58
CLDN18-203ENST00000479660 SVBPQ8N300 66 aa11.42□□□□□ -0.58
CLDN18-203ENST00000479660 RXFP4Q8TDU9 374 aa11.42□□□□□ -0.58
CLDN18-203ENST00000479660 C22orf15Q8WYQ4 148 aa11.42□□□□□ -0.58
CLDN18-203ENST00000479660 HELZ2Q9BYK8 2649 aaKnown RBP11.41□□□□□ -0.58
CLDN18-203ENST00000479660 BCL2P10415 239 aa11.41□□□□□ -0.58
CLDN18-203ENST00000479660 GUCA2BQ16661 112 aa11.41□□□□□ -0.58
CLDN18-203ENST00000479660 PRSS57Q6UWY2 283 aa11.41□□□□□ -0.58
CLDN18-203ENST00000479660 CYP2G1PQ6ZSU1 146 aa11.41□□□□□ -0.58
CLDN18-203ENST00000479660 THAP8Q8NA92 274 aa11.41□□□□□ -0.58
CLDN18-203ENST00000479660 TMEM116Q8NCL8 245 aa11.41□□□□□ -0.58
CLDN18-203ENST00000479660 OR1L6Q8NGR2 347 aa11.41□□□□□ -0.58
CLDN18-203ENST00000479660 Q96MF0 132 aa11.41□□□□□ -0.58
CLDN18-203ENST00000479660 SSX3Q99909 188 aa11.41□□□□□ -0.58
CLDN18-203ENST00000479660 SOX21Q9Y651 276 aaPredicted RBP11.41□□□□□ -0.58
CLDN18-203ENST00000479660 APCP25054 2843 aa11.41□□□□□ -0.58
CLDN18-203ENST00000479660 LOC102723971A0A1B0GUV8 181 aa11.4□□□□□ -0.58
CLDN18-203ENST00000479660 IFNA1P01562 189 aa11.4□□□□□ -0.58
CLDN18-203ENST00000479660 HSPB1P04792 205 aaKnown RBP11.4□□□□□ -0.58
CLDN18-203ENST00000479660 RHOBP62745 196 aa11.4□□□□□ -0.58
CLDN18-203ENST00000479660 PMS2P11Q13670 270 aa11.4□□□□□ -0.58
CLDN18-203ENST00000479660 ASPHD1Q5U4P2 390 aa11.4□□□□□ -0.58
CLDN18-203ENST00000479660 RBMS3Q6XE24 437 aaKnown RBP11.4□□□□□ -0.58
CLDN18-203ENST00000479660 SLC35E3Q7Z769 313 aa11.4□□□□□ -0.58
CLDN18-203ENST00000479660 PIFOQ8TCI5 191 aa11.4□□□□□ -0.58
CLDN18-203ENST00000479660 SEPSECSQ9HD40 501 aaKnown RBP11.4□□□□□ -0.58
CLDN18-203ENST00000479660 IGKV1D-37A0A075B6S9 117 aa11.4□□□□□ -0.59
CLDN18-203ENST00000479660 TCRBV4S1A1TA0A5B7 111 aa11.4□□□□□ -0.59
CLDN18-203ENST00000479660 NPIPB5A8MRT5 1133 aa11.4□□□□□ -0.59
CLDN18-203ENST00000479660 J3QLI3 93 aa11.4□□□□□ -0.59
CLDN18-203ENST00000479660 FBP1P09467 338 aa11.4□□□□□ -0.59
CLDN18-203ENST00000479660 ZNF90Q03938 601 aa11.4□□□□□ -0.59
CLDN18-203ENST00000479660 TMEM249Q2WGJ8 235 aa11.4□□□□□ -0.59
CLDN18-203ENST00000479660 ATRAIDQ6UW56 229 aa11.4□□□□□ -0.59
CLDN18-203ENST00000479660 TMEM219Q86XT9 240 aa11.4□□□□□ -0.59
CLDN18-203ENST00000479660 RBM14Q96PK6 669 aaKnown RBP11.4□□□□□ -0.59
CLDN18-203ENST00000479660 HSPB9Q9BQS6 159 aa11.4□□□□□ -0.59
CLDN18-203ENST00000479660 I3L2K1 104 aa11.39□□□□□ -0.59
CLDN18-203ENST00000479660 TSPAN9O75954 239 aa11.39□□□□□ -0.59
CLDN18-203ENST00000479660 SRP19P09132 144 aaKnown RBP11.39□□□□□ -0.59
CLDN18-203ENST00000479660 STAG3L2P0CL84 134 aa11.39□□□□□ -0.59
CLDN18-203ENST00000479660 STAG3L3P0CL85 134 aa11.39□□□□□ -0.59
CLDN18-203ENST00000479660 IGHV4-31P0DP07 118 aa11.39□□□□□ -0.59
CLDN18-203ENST00000479660 EGR2P11161 476 aaPredicted RBP11.39□□□□□ -0.59
CLDN18-203ENST00000479660 FAM78BQ5VT40 261 aa11.39□□□□□ -0.59
CLDN18-203ENST00000479660 TTC9CQ8N5M4 171 aa11.39□□□□□ -0.59
CLDN18-203ENST00000479660 TNFRSF19Q9NS68 423 aa11.39□□□□□ -0.59
CLDN18-203ENST00000479660 CSPG4Q6UVK1 2322 aa11.38□□□□□ -0.59
CLDN18-203ENST00000479660 SELENOTP62341 195 aa11.38□□□□□ -0.59
CLDN18-203ENST00000479660 KRTAP1-3Q8IUG1 177 aa11.38□□□□□ -0.59
CLDN18-203ENST00000479660 C5orf56Q8N8D9 126 aa11.38□□□□□ -0.59
CLDN18-203ENST00000479660 VAX2Q9UIW0 290 aa11.38□□□□□ -0.59
CLDN18-203ENST00000479660 MOB4Q9Y3A3 225 aa11.38□□□□□ -0.59
CLDN18-203ENST00000479660 PSMB3P49720 205 aa11.38□□□□□ -0.59
CLDN18-203ENST00000479660 CEBPGP53567 150 aa11.38□□□□□ -0.59
CLDN18-203ENST00000479660 SOHLH1Q5JUK2 328 aa11.38□□□□□ -0.59
CLDN18-203ENST00000479660 SPATA31B1PQ5VZV4 182 aa11.38□□□□□ -0.59
CLDN18-203ENST00000479660 OR5T1Q8NG75 326 aa11.38□□□□□ -0.59
CLDN18-203ENST00000479660 C19orf24Q9BVV8 132 aa11.38□□□□□ -0.59
CLDN18-203ENST00000479660 SH2D7A6NKC9 451 aaPredicted RBP11.37□□□□□ -0.59
CLDN18-203ENST00000479660 K7EIM0 57 aa11.37□□□□□ -0.59
CLDN18-203ENST00000479660 SNAPINO95295 136 aa11.37□□□□□ -0.59
CLDN18-203ENST00000479660 CXorf1O96002 111 aa11.37□□□□□ -0.59
CLDN18-203ENST00000479660 ARL14EPLP0DKL9 152 aa11.37□□□□□ -0.59
CLDN18-203ENST00000479660 CYB561D1Q8N8Q1 229 aa11.37□□□□□ -0.59
CLDN18-203ENST00000479660 SGMS2Q8NHU3 365 aa11.37□□□□□ -0.59
CLDN18-203ENST00000479660 GATAD1Q8WUU5 269 aa11.37□□□□□ -0.59
CLDN18-203ENST00000479660 TMEM37Q8WXS4 190 aa11.37□□□□□ -0.59
CLDN18-203ENST00000479660 FANCD2OSQ96PS1 177 aa11.37□□□□□ -0.59
CLDN18-203ENST00000479660 TRGV9Q99603 122 aa11.37□□□□□ -0.59
CLDN18-203ENST00000479660 NKX6-2Q9C056 277 aaPredicted RBP11.37□□□□□ -0.59
CLDN18-203ENST00000479660 MANBALQ9NQG1 85 aa11.37□□□□□ -0.59
CLDN18-203ENST00000479660 FUT9Q9Y231 359 aa11.37□□□□□ -0.59
CLDN18-203ENST00000479660 TMA7Q9Y2S6 64 aaKnown RBP11.37□□□□□ -0.59
CLDN18-203ENST00000479660 CR1P17927 2039 aa11.37□□□□□ -0.59
CLDN18-203ENST00000479660 H3BUX3 64 aa11.36□□□□□ -0.59
CLDN18-203ENST00000479660 SPNS3Q6ZMD2 512 aa11.36□□□□□ -0.59
CLDN18-203ENST00000479660 MIR17HGQ75NE6 70 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms