RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 TEX48A0A1B0GUV7 120 aa12.22□□□□□ -0.45
HMGN1-212ENST00000479586 SMIM9A6NGZ8 99 aa12.22□□□□□ -0.45
HMGN1-212ENST00000479586 SCGNO76038 276 aa12.21□□□□□ -0.45
HMGN1-212ENST00000479586 FXYD7P58549 80 aa12.21□□□□□ -0.45
HMGN1-212ENST00000479586 HERV-K104P61576 105 aa12.21□□□□□ -0.45
HMGN1-212ENST00000479586 PRCDQ00LT1 54 aa12.21□□□□□ -0.45
HMGN1-212ENST00000479586 OXA1LQ15070 435 aa12.21□□□□□ -0.45
HMGN1-212ENST00000479586 KCTD21Q4G0X4 260 aa12.21□□□□□ -0.45
HMGN1-212ENST00000479586 TSC22D3Q99576 134 aa12.21□□□□□ -0.45
HMGN1-212ENST00000479586 MRPL36Q9P0J6 103 aaKnown RBP12.21□□□□□ -0.45
HMGN1-212ENST00000479586 FLG2Q5D862 2391 aaPredicted RBP12.21□□□□□ -0.46
HMGN1-212ENST00000479586 RGS10O43665 173 aa12.2□□□□□ -0.46
HMGN1-212ENST00000479586 SPINK9Q5DT21 86 aa12.2□□□□□ -0.46
HMGN1-212ENST00000479586 C22orf42Q6IC83 251 aa12.2□□□□□ -0.46
HMGN1-212ENST00000479586 C15orf53Q8NAA6 179 aa12.2□□□□□ -0.46
HMGN1-212ENST00000479586 LGALS14Q8TCE9 139 aa12.2□□□□□ -0.46
HMGN1-212ENST00000479586 NARS2Q96I59 477 aaKnown RBP12.2□□□□□ -0.46
HMGN1-212ENST00000479586 DUSP21Q9H596 190 aa12.2□□□□□ -0.46
HMGN1-212ENST00000479586 FAM90A26D6RGX4 464 aa12.19□□□□□ -0.46
HMGN1-212ENST00000479586 IGKV3-20P01619 116 aa12.19□□□□□ -0.46
HMGN1-212ENST00000479586 HLA-DRB4P13762 266 aa12.19□□□□□ -0.46
HMGN1-212ENST00000479586 OR5AP2Q8NGF4 316 aa12.19□□□□□ -0.46
HMGN1-212ENST00000479586 GLMPQ8WWB7 406 aa12.19□□□□□ -0.46
HMGN1-212ENST00000479586 BORCS5Q969J3 196 aa12.19□□□□□ -0.46
HMGN1-212ENST00000479586 RHBDL2Q9NX52 303 aa12.19□□□□□ -0.46
HMGN1-212ENST00000479586 YTHDF2Q9Y5A9 579 aaKnown RBP12.19□□□□□ -0.46
HMGN1-212ENST00000479586 HLA-DRB4X5D2U9 266 aa12.19□□□□□ -0.46
HMGN1-212ENST00000479586 TRAV18A0A075B6X5 111 aa12.18□□□□□ -0.46
HMGN1-212ENST00000479586 NOTOA8MTQ0 251 aa12.18□□□□□ -0.46
HMGN1-212ENST00000479586 EIF2B2P49770 351 aaKnown RBP12.18□□□□□ -0.46
HMGN1-212ENST00000479586 SNRPD3P62318 126 aaKnown RBP12.18□□□□□ -0.46
HMGN1-212ENST00000479586 ERHP84090 104 aaKnown RBP12.18□□□□□ -0.46
HMGN1-212ENST00000479586 OGFRL1Q5TC84 451 aaPredicted RBP12.18□□□□□ -0.46
HMGN1-212ENST00000479586 OR4A16Q8NH70 328 aa12.18□□□□□ -0.46
HMGN1-212ENST00000479586 TMEM230Q96A57 120 aa12.18□□□□□ -0.46
HMGN1-212ENST00000479586 DAPK2Q9UIK4 370 aa12.18□□□□□ -0.46
HMGN1-212ENST00000479586 TPRKBQ9Y3C4 175 aa12.18□□□□□ -0.46
HMGN1-212ENST00000479586 U3KQE9 123 aa12.18□□□□□ -0.46
HMGN1-212ENST00000479586 TRDV1A0A1B0GX56 115 aa12.17□□□□□ -0.46
HMGN1-212ENST00000479586 DEFB1P60022 68 aa12.17□□□□□ -0.46
HMGN1-212ENST00000479586 HSPE1P61604 102 aaKnown RBP12.17□□□□□ -0.46
HMGN1-212ENST00000479586 DAD1P61803 113 aa12.17□□□□□ -0.46
HMGN1-212ENST00000479586 GDF5OSQ5U4N7 250 aa12.17□□□□□ -0.46
HMGN1-212ENST00000479586 C16orf54Q6UWD8 224 aa12.17□□□□□ -0.46
HMGN1-212ENST00000479586 SEC22AQ96IW7 307 aa12.17□□□□□ -0.46
HMGN1-212ENST00000479586 NDUFB11Q9NX14 153 aa12.17□□□□□ -0.46
HMGN1-212ENST00000479586 EHFQ9NZC4 300 aa12.17□□□□□ -0.46
HMGN1-212ENST00000479586 LOC102723971A0A1B0GUV8 181 aa12.16□□□□□ -0.46
HMGN1-212ENST00000479586 MEIS3P1A6NDR6 274 aa12.16□□□□□ -0.46
HMGN1-212ENST00000479586 CLN5O75503 358 aa12.16□□□□□ -0.46
HMGN1-212ENST00000479586 IGKV1-17P01599 117 aa12.16□□□□□ -0.46
HMGN1-212ENST00000479586 MLANAQ16655 118 aa12.16□□□□□ -0.46
HMGN1-212ENST00000479586 TIGITQ495A1 244 aa12.16□□□□□ -0.46
HMGN1-212ENST00000479586 ZNF2Q9BSG1 426 aaPredicted RBP12.16□□□□□ -0.46
HMGN1-212ENST00000479586 FNDC4Q9H6D8 234 aaPredicted RBP12.16□□□□□ -0.46
HMGN1-212ENST00000479586 IGKV1-39P01597 117 aa12.15□□□□□ -0.46
HMGN1-212ENST00000479586 IGKV1D-39P04432 117 aa12.15□□□□□ -0.46
HMGN1-212ENST00000479586 IZUMO4Q1ZYL8 232 aa12.15□□□□□ -0.46
HMGN1-212ENST00000479586 GSG1LQ6UXU4 331 aa12.15□□□□□ -0.46
HMGN1-212ENST00000479586 PRSS48Q7RTY5 328 aa12.15□□□□□ -0.46
HMGN1-212ENST00000479586 H2BFWTQ7Z2G1 175 aa12.15□□□□□ -0.46
HMGN1-212ENST00000479586 CMTM1Q8IZ96 169 aa12.15□□□□□ -0.46
HMGN1-212ENST00000479586 ZNF709Q8N972 641 aa12.15□□□□□ -0.46
HMGN1-212ENST00000479586 SLC25A38Q96DW6 304 aa12.15□□□□□ -0.46
HMGN1-212ENST00000479586 FXYD6Q9H0Q3 95 aa12.15□□□□□ -0.46
HMGN1-212ENST00000479586 NRN1Q9NPD7 142 aa12.15□□□□□ -0.46
HMGN1-212ENST00000479586 RPS10-NUDT3A0A1W2PQS6 291 aa12.14□□□□□ -0.47
HMGN1-212ENST00000479586 NUDT3O95989 172 aa12.14□□□□□ -0.47
HMGN1-212ENST00000479586 SNCAP37840 140 aa12.14□□□□□ -0.47
HMGN1-212ENST00000479586 RFX2P48378 723 aa12.14□□□□□ -0.47
HMGN1-212ENST00000479586 AP2S1P53680 142 aaPredicted RBP12.14□□□□□ -0.47
HMGN1-212ENST00000479586 PHLDA2Q53GA4 152 aa12.14□□□□□ -0.47
HMGN1-212ENST00000479586 DHRS11Q6UWP2 260 aa12.14□□□□□ -0.47
HMGN1-212ENST00000479586 OR5H6Q8NGV6 325 aa12.14□□□□□ -0.47
HMGN1-212ENST00000479586 OR4X1Q8NH49 305 aa12.14□□□□□ -0.47
HMGN1-212ENST00000479586 KRTAP1-5Q9BYS1 174 aa12.14□□□□□ -0.47
HMGN1-212ENST00000479586 AUNIPQ9H7T9 357 aa12.14□□□□□ -0.47
HMGN1-212ENST00000479586 SEPSECSQ9HD40 501 aaKnown RBP12.14□□□□□ -0.47
HMGN1-212ENST00000479586 LINC00588Q9Y4M8 146 aa12.14□□□□□ -0.47
HMGN1-212ENST00000479586 GPR31O00270 319 aa12.13□□□□□ -0.47
HMGN1-212ENST00000479586 HBE1P02100 147 aa12.13□□□□□ -0.47
HMGN1-212ENST00000479586 HNRNPCP07910 306 aaKnown RBP eCLIP12.13□□□□□ -0.47
HMGN1-212ENST00000479586 RNASE2P10153 161 aaKnown RBP12.13□□□□□ -0.47
HMGN1-212ENST00000479586 NKX2-1P43699 371 aaPredicted RBP12.13□□□□□ -0.47
HMGN1-212ENST00000479586 Q5VSD8 79 aa12.13□□□□□ -0.47
HMGN1-212ENST00000479586 C1orf158Q8N1D5 194 aa12.13□□□□□ -0.47
HMGN1-212ENST00000479586 MRGPRFQ96AM1 343 aa12.13□□□□□ -0.47
HMGN1-212ENST00000479586 RRP15Q9Y3B9 282 aaKnown RBP12.13□□□□□ -0.47
HMGN1-212ENST00000479586 OPRK1P41145 380 aa12.12□□□□□ -0.47
HMGN1-212ENST00000479586 TBCEQ15813 527 aaPredicted RBP12.12□□□□□ -0.47
HMGN1-212ENST00000479586 SFXN4Q6P4A7 337 aa12.12□□□□□ -0.47
HMGN1-212ENST00000479586 SLC35B3Q9H1N7 401 aa12.12□□□□□ -0.47
HMGN1-212ENST00000479586 GOLT1BQ9Y3E0 138 aa12.12□□□□□ -0.47
HMGN1-212ENST00000479586 CORTO00230 105 aa12.11□□□□□ -0.47
HMGN1-212ENST00000479586 SCGB2A1O75556 95 aa12.11□□□□□ -0.47
HMGN1-212ENST00000479586 PMP2P02689 132 aa12.11□□□□□ -0.47
HMGN1-212ENST00000479586 CBX5P45973 191 aa12.11□□□□□ -0.47
HMGN1-212ENST00000479586 CCL18P55774 89 aa12.11□□□□□ -0.47
HMGN1-212ENST00000479586 RRN3P1Q2M238 152 aa12.11□□□□□ -0.47
HMGN1-212ENST00000479586 LYPD1Q8N2G4 141 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms