RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 RBFOX2O43251 390 aaKnown RBP eCLIP8.21□□□□□ -1.1
HDAC8-217ENST00000478743 SLC22A5O76082 557 aa8.21□□□□□ -1.1
HDAC8-217ENST00000478743 HPRT1P00492 218 aa8.21□□□□□ -1.1
HDAC8-217ENST00000478743 FGF2P09038 288 aa8.21□□□□□ -1.1
HDAC8-217ENST00000478743 PTHLHP12272 177 aa8.21□□□□□ -1.1
HDAC8-217ENST00000478743 CALB2P22676 271 aa8.21□□□□□ -1.1
HDAC8-217ENST00000478743 SSX1Q16384 188 aa8.21□□□□□ -1.1
HDAC8-217ENST00000478743 FAM78BQ5VT40 261 aa8.21□□□□□ -1.1
HDAC8-217ENST00000478743 SCXQ7RTU7 201 aa8.21□□□□□ -1.1
HDAC8-217ENST00000478743 OR51H1Q8NH63 302 aa8.21□□□□□ -1.1
HDAC8-217ENST00000478743 SECTM1Q8WVN6 248 aa8.21□□□□□ -1.1
HDAC8-217ENST00000478743 WDR12Q9GZL7 423 aaKnown RBP8.21□□□□□ -1.1
HDAC8-217ENST00000478743 NRN1Q9NPD7 142 aa8.21□□□□□ -1.1
HDAC8-217ENST00000478743 DIMT1Q9UNQ2 313 aaKnown RBP8.21□□□□□ -1.1
HDAC8-217ENST00000478743 CRXO43186 299 aaPredicted RBP8.2□□□□□ -1.1
HDAC8-217ENST00000478743 NXPH4O95158 308 aa8.2□□□□□ -1.1
HDAC8-217ENST00000478743 HIST1H1DP16402 221 aaKnown RBP8.2□□□□□ -1.1
HDAC8-217ENST00000478743 ELK1P19419 428 aa8.2□□□□□ -1.1
HDAC8-217ENST00000478743 M6PRP20645 277 aa8.2□□□□□ -1.1
HDAC8-217ENST00000478743 MAPK3P27361 379 aaPredicted RBP8.2□□□□□ -1.1
HDAC8-217ENST00000478743 PSG9Q00887 426 aa8.2□□□□□ -1.1
HDAC8-217ENST00000478743 AMTNQ6UX39 209 aa8.2□□□□□ -1.1
HDAC8-217ENST00000478743 FOXI2Q6ZQN5 318 aa8.2□□□□□ -1.1
HDAC8-217ENST00000478743 PHYHIPQ92561 330 aa8.2□□□□□ -1.1
HDAC8-217ENST00000478743 LINC00052Q96N35 136 aa8.2□□□□□ -1.1
HDAC8-217ENST00000478743 TMEM208Q9BTX3 173 aa8.2□□□□□ -1.1
HDAC8-217ENST00000478743 PLGRKTQ9HBL7 147 aa8.2□□□□□ -1.1
HDAC8-217ENST00000478743 AP4S1Q9Y587 144 aa8.2□□□□□ -1.1
HDAC8-217ENST00000478743 A0A096LPF7 62 aa8.19□□□□□ -1.1
HDAC8-217ENST00000478743 MARCH11A6NNE9 402 aa8.19□□□□□ -1.1
HDAC8-217ENST00000478743 MYL12AP19105 171 aa8.19□□□□□ -1.1
HDAC8-217ENST00000478743 NPBWR1P48145 328 aa8.19□□□□□ -1.1
HDAC8-217ENST00000478743 GYS2P54840 703 aa8.19□□□□□ -1.1
HDAC8-217ENST00000478743 C2orf76Q3KRA6 126 aa8.19□□□□□ -1.1
HDAC8-217ENST00000478743 TIGITQ495A1 244 aa8.19□□□□□ -1.1
HDAC8-217ENST00000478743 SPINK9Q5DT21 86 aa8.19□□□□□ -1.1
HDAC8-217ENST00000478743 NFE4Q86UQ8 179 aa8.19□□□□□ -1.1
HDAC8-217ENST00000478743 CADM3Q8N126 398 aa8.19□□□□□ -1.1
HDAC8-217ENST00000478743 CENPNQ96H22 339 aaPredicted RBP8.19□□□□□ -1.1
HDAC8-217ENST00000478743 IGF2BP2-AS1Q96M15 143 aa8.19□□□□□ -1.1
HDAC8-217ENST00000478743 CLUHP3Q96NS8 147 aa8.19□□□□□ -1.1
HDAC8-217ENST00000478743 MUC2Q02817 5179 aa8.18□□□□□ -1.1
HDAC8-217ENST00000478743 M0R2Z0 102 aa8.18□□□□□ -1.1
HDAC8-217ENST00000478743 IGKV1-17P01599 117 aa8.18□□□□□ -1.1
HDAC8-217ENST00000478743 G6PCP35575 357 aa8.18□□□□□ -1.1
HDAC8-217ENST00000478743 PAX9P55771 341 aa8.18□□□□□ -1.1
HDAC8-217ENST00000478743 RAB11BQ15907 218 aa8.18□□□□□ -1.1
HDAC8-217ENST00000478743 MLANAQ16655 118 aa8.18□□□□□ -1.1
HDAC8-217ENST00000478743 BAP18Q8IXM2 172 aa8.18□□□□□ -1.1
HDAC8-217ENST00000478743 OR10R2Q8NGX6 335 aa8.18□□□□□ -1.1
HDAC8-217ENST00000478743 NTN5Q8WTR8 489 aaPredicted RBP8.18□□□□□ -1.1
HDAC8-217ENST00000478743 FAM3DQ96BQ1 224 aa8.18□□□□□ -1.1
HDAC8-217ENST00000478743 DAZAP1Q96EP5 407 aaKnown RBP8.18□□□□□ -1.1
HDAC8-217ENST00000478743 AIFM2Q9BRQ8 373 aa8.18□□□□□ -1.1
HDAC8-217ENST00000478743 PLEKHA2Q9HB19 425 aa8.18□□□□□ -1.1
HDAC8-217ENST00000478743 SEPSECSQ9HD40 501 aaKnown RBP8.18□□□□□ -1.1
HDAC8-217ENST00000478743 AK6Q9Y3D8 172 aaKnown RBP8.18□□□□□ -1.1
HDAC8-217ENST00000478743 NPIPB6E9PJ23 425 aa8.17□□□□□ -1.1
HDAC8-217ENST00000478743 SOCS3O14543 225 aa8.17□□□□□ -1.1
HDAC8-217ENST00000478743 C1QBP02746 253 aa8.17□□□□□ -1.1
HDAC8-217ENST00000478743 CD1AP06126 327 aa8.17□□□□□ -1.1
HDAC8-217ENST00000478743 HOXA1P49639 335 aaPredicted RBP8.17□□□□□ -1.1
HDAC8-217ENST00000478743 KIR3DS1Q14943 382 aa8.17□□□□□ -1.1
HDAC8-217ENST00000478743 SIGLEC15Q6ZMC9 328 aa8.17□□□□□ -1.1
HDAC8-217ENST00000478743 Q8N814 137 aa8.17□□□□□ -1.1
HDAC8-217ENST00000478743 TMEM230Q96A57 120 aa8.17□□□□□ -1.1
HDAC8-217ENST00000478743 VSIG2Q96IQ7 327 aa8.17□□□□□ -1.1
HDAC8-217ENST00000478743 TMEM56Q96MV1 263 aa8.17□□□□□ -1.1
HDAC8-217ENST00000478743 SCPEP1Q9HB40 452 aa8.17□□□□□ -1.1
HDAC8-217ENST00000478743 COMMD9Q9P000 198 aa8.17□□□□□ -1.1
HDAC8-217ENST00000478743 A0A0J9YX75 114 aa8.16□□□□□ -1.1
HDAC8-217ENST00000478743 A8MTW9 85 aa8.16□□□□□ -1.1
HDAC8-217ENST00000478743 KRASP01116 189 aa8.16□□□□□ -1.1
HDAC8-217ENST00000478743 HNRNPCP07910 306 aaKnown RBP eCLIP8.16□□□□□ -1.1
HDAC8-217ENST00000478743 TSPOP30536 169 aa8.16□□□□□ -1.1
HDAC8-217ENST00000478743 TALDO1P37837 337 aa8.16□□□□□ -1.1
HDAC8-217ENST00000478743 EIF2B2P49770 351 aaKnown RBP8.16□□□□□ -1.1
HDAC8-217ENST00000478743 SPINK13Q1W4C9 94 aa8.16□□□□□ -1.1
HDAC8-217ENST00000478743 LINC01620Q4KN68 170 aa8.16□□□□□ -1.1
HDAC8-217ENST00000478743 HSD17B12Q53GQ0 312 aa8.16□□□□□ -1.1
HDAC8-217ENST00000478743 ZNF818PQ6ZRF7 136 aa8.16□□□□□ -1.1
HDAC8-217ENST00000478743 OR13F1Q8NGS4 319 aa8.16□□□□□ -1.1
HDAC8-217ENST00000478743 LGALS14Q8TCE9 139 aa8.16□□□□□ -1.1
HDAC8-217ENST00000478743 NUDCD2Q8WVJ2 157 aa8.16□□□□□ -1.1
HDAC8-217ENST00000478743 GPR146Q96CH1 333 aa8.16□□□□□ -1.1
HDAC8-217ENST00000478743 NARS2Q96I59 477 aaKnown RBP8.16□□□□□ -1.1
HDAC8-217ENST00000478743 C20orf173Q96LM9 149 aa8.16□□□□□ -1.1
HDAC8-217ENST00000478743 NOP10Q9NPE3 64 aaKnown RBP8.16□□□□□ -1.1
HDAC8-217ENST00000478743 MSRB1Q9NZV6 116 aa8.16□□□□□ -1.1
HDAC8-217ENST00000478743 ORC6Q9Y5N6 252 aa8.16□□□□□ -1.1
HDAC8-217ENST00000478743 CLN5O75503 358 aa8.15□□□□□ -1.1
HDAC8-217ENST00000478743 UCHL1P09936 223 aa8.15□□□□□ -1.1
HDAC8-217ENST00000478743 DTYMKP23919 212 aa8.15□□□□□ -1.1
HDAC8-217ENST00000478743 ERVK-16P61578 105 aa8.15□□□□□ -1.1
HDAC8-217ENST00000478743 ST3GAL4Q11206 333 aa8.15□□□□□ -1.1
HDAC8-217ENST00000478743 HES5Q5TA89 166 aa8.15□□□□□ -1.1
HDAC8-217ENST00000478743 TMED4Q7Z7H5 227 aa8.15□□□□□ -1.1
HDAC8-217ENST00000478743 FCAMRQ8WWV6 532 aa8.15□□□□□ -1.1
HDAC8-217ENST00000478743 TRAV12-2A0A075B6T6 113 aa8.14□□□□□ -1.11
HDAC8-217ENST00000478743 RS1O15537 224 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms