RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 GABRA2P47869 451 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 PPP3R1P63098 170 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 HBG1P69891 147 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 HBG2P69892 147 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 TNFAIP6P98066 277 aaPredicted RBP1.09□□□□□ -2.23
VPS50-213ENST00000477572 HTR4Q13639 388 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 PMAIP1Q13794 54 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 PAFAH1B3Q15102 231 aaKnown RBP1.09□□□□□ -2.23
VPS50-213ENST00000477572 CLEC12BQ2HXU8 276 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 SCGB2B2Q4G0G5 96 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 HSD17B12Q53GQ0 312 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 MESTQ5EB52 335 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 FAM201AQ5SY85 155 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 AKR1C8PQ5T2L2 129 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 TEX261Q6UWH6 196 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 HRCT1Q6UXD1 115 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 CLEC20AQ6ZU45 233 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 ZNF550Q7Z398 422 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 CTAGE3PQ8IX95 158 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 PDZD9Q8IXQ8 264 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 GDPD1Q8N9F7 314 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 OR4E2Q8NGC2 313 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 OR8B12Q8NGG6 310 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 OR13C8Q8NGS7 320 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 TERB2Q8NHR7 220 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 JOSD2Q8TAC2 188 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 THEM6Q8WUY1 208 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 NAT14Q8WUY8 206 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 CYGBQ8WWM9 190 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 ARL11Q969Q4 196 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 TP53RKQ96S44 253 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 PITX2Q99697 317 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 HSPB9Q9BQS6 159 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 GNB1LQ9BYB4 327 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 ULBP3Q9BZM4 244 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 AICDAQ9GZX7 198 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 TMEM126AQ9H061 195 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 SH3BGRL3Q9H299 93 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 OR51I2Q9H344 312 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 LYRM2Q9NU23 88 aaPredicted RBP1.09□□□□□ -2.23
VPS50-213ENST00000477572 ACER3Q9NUN7 267 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 DMAC2Q9NW81 257 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 TRAPPC2LQ9UL33 140 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 SNX12Q9UMY4 172 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 SSR3Q9UNL2 185 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 LAMTOR2Q9Y2Q5 125 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 KIF20BQ96Q89 1820 aa1.09□□□□□ -2.23
VPS50-213ENST00000477572 CHD3Q12873 2000 aaKnown RBP1.09□□□□□ -2.24
VPS50-213ENST00000477572 DENND4BO75064 1496 aaPredicted RBP1.09□□□□□ -2.24
VPS50-213ENST00000477572 NCAPD3P42695 1498 aa1.09□□□□□ -2.24
VPS50-213ENST00000477572 SDK1Q7Z5N4 2213 aa1.09□□□□□ -2.24
VPS50-213ENST00000477572 FER1L6Q2WGJ9 1857 aa1.09□□□□□ -2.24
VPS50-213ENST00000477572 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
VPS50-213ENST00000477572 COL4A2P08572 1712 aa1.09□□□□□ -2.24
VPS50-213ENST00000477572 RTL1A6NKG5 1358 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 ABCC12Q96J65 1359 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 ROBO3Q96MS0 1386 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 MED23Q9ULK4 1368 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 COL18A1P39060 1754 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 UBR2Q8IWV8 1755 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 PARP14Q460N5 1801 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 ZCCHC11Q5TAX3 1644 aaKnown RBP1.08□□□□□ -2.24
VPS50-213ENST00000477572 PLCH2O75038 1416 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 CPSF1Q10570 1443 aaKnown RBP1.08□□□□□ -2.24
VPS50-213ENST00000477572 SCAPERQ9BY12 1400 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 CCDC18Q5T9S5 1454 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 MBD5Q9P267 1494 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 BORCS7-ASMTA0A0B4J1R7 106 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 LOC107984640A0A0U1RRK4 108 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 DUXBA0A1W2PPF3 345 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 FABP5P3A8MUU1 101 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 A8MWP6 167 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 C9JAW5 83 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 H7C1C5 153 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 I3L4J1 428 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 I3L521 148 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 SLC25A20O43772 301 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 PDCD6O75340 191 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 PGLYRP1O75594 196 aaPredicted RBP1.08□□□□□ -2.24
VPS50-213ENST00000477572 ARL6IP5O75915 188 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 GADD45GO95257 159 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 FGF6P10767 208 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 SPNP16150 400 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 HIST1H1BP16401 226 aaKnown RBP1.08□□□□□ -2.24
VPS50-213ENST00000477572 ATF1P18846 271 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 ORM2P19652 201 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 FGF7P21781 194 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 CMPK1P30085 196 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 G6PCP35575 357 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 MARCKSL1P49006 195 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 POLR2HP52434 150 aaKnown RBP1.08□□□□□ -2.24
VPS50-213ENST00000477572 CTBP2P56545 445 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 H2BFSP57053 126 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 COPZ1P61923 177 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 NCS1P62166 190 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 LCN6P62502 163 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 RPS25P62851 125 aaKnown RBP1.08□□□□□ -2.24
VPS50-213ENST00000477572 RPS28P62857 69 aaKnown RBP1.08□□□□□ -2.24
VPS50-213ENST00000477572 SELENOWP63302 87 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 HBA1P69905 142 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms