RNA–Protein interactions for RNA: ENST00000475818.5

HDAC11-217, Transcript of histone deacetylase 11, humanhuman

TSL 3

Gene HDAC11, Length 1,271 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-217ENST00000475818 HOGA1Q86XE5 327 aa14.25□□□□□ -0.13
HDAC11-217ENST00000475818 SCN3BQ9NY72 215 aa14.25□□□□□ -0.13
HDAC11-217ENST00000475818 PGLYRP1O75594 196 aaPredicted RBP14.24□□□□□ -0.13
HDAC11-217ENST00000475818 HERV-K104P61576 105 aa14.24□□□□□ -0.13
HDAC11-217ENST00000475818 DAD1P61803 113 aa14.24□□□□□ -0.13
HDAC11-217ENST00000475818 KCTD21Q4G0X4 260 aa14.24□□□□□ -0.13
HDAC11-217ENST00000475818 SPINK9Q5DT21 86 aa14.24□□□□□ -0.13
HDAC11-217ENST00000475818 TMEM230Q96A57 120 aa14.24□□□□□ -0.13
HDAC11-217ENST00000475818 MGLLQ99685 303 aa14.24□□□□□ -0.13
HDAC11-217ENST00000475818 C8orf4Q9NR00 106 aa14.24□□□□□ -0.13
HDAC11-217ENST00000475818 YTHDF2Q9Y5A9 579 aaKnown RBP14.24□□□□□ -0.13
HDAC11-217ENST00000475818 FAM90A26D6RGX4 464 aa14.23□□□□□ -0.13
HDAC11-217ENST00000475818 EIF2B2P49770 351 aaKnown RBP14.23□□□□□ -0.13
HDAC11-217ENST00000475818 SNRPD3P62318 126 aaKnown RBP14.23□□□□□ -0.13
HDAC11-217ENST00000475818 PRCDQ00LT1 54 aa14.23□□□□□ -0.13
HDAC11-217ENST00000475818 GSG1LQ6UXU4 331 aa14.23□□□□□ -0.13
HDAC11-217ENST00000475818 CADM3Q8N126 398 aa14.23□□□□□ -0.13
HDAC11-217ENST00000475818 TSC22D3Q99576 134 aa14.23□□□□□ -0.13
HDAC11-217ENST00000475818 HLA-DRB4P13762 266 aa14.22□□□□□ -0.13
HDAC11-217ENST00000475818 DEFB1P60022 68 aa14.22□□□□□ -0.13
HDAC11-217ENST00000475818 OGFRL1Q5TC84 451 aaPredicted RBP14.22□□□□□ -0.13
HDAC11-217ENST00000475818 OR4A16Q8NH70 328 aa14.22□□□□□ -0.13
HDAC11-217ENST00000475818 MRPL36Q9P0J6 103 aaKnown RBP14.22□□□□□ -0.13
HDAC11-217ENST00000475818 HLA-DRB4X5D2U9 266 aa14.22□□□□□ -0.13
HDAC11-217ENST00000475818 FLG2Q5D862 2391 aaPredicted RBP14.21□□□□□ -0.13
HDAC11-217ENST00000475818 LOC102723971A0A1B0GUV8 181 aa14.21□□□□□ -0.13
HDAC11-217ENST00000475818 RPS10-NUDT3A0A1W2PQS6 291 aa14.21□□□□□ -0.13
HDAC11-217ENST00000475818 SCGNO76038 276 aa14.21□□□□□ -0.13
HDAC11-217ENST00000475818 NUDT3O95989 172 aa14.21□□□□□ -0.13
HDAC11-217ENST00000475818 ERHP84090 104 aaKnown RBP14.21□□□□□ -0.13
HDAC11-217ENST00000475818 GDF5OSQ5U4N7 250 aa14.21□□□□□ -0.13
HDAC11-217ENST00000475818 Q5VSD8 79 aa14.21□□□□□ -0.13
HDAC11-217ENST00000475818 LGALS14Q8TCE9 139 aa14.21□□□□□ -0.13
HDAC11-217ENST00000475818 GLMPQ8WWB7 406 aa14.21□□□□□ -0.13
HDAC11-217ENST00000475818 TRAV18A0A075B6X5 111 aa14.2□□□□□ -0.14
HDAC11-217ENST00000475818 C16orf54Q6UWD8 224 aa14.2□□□□□ -0.14
HDAC11-217ENST00000475818 BORCS5Q969J3 196 aa14.2□□□□□ -0.14
HDAC11-217ENST00000475818 C18orf15Q96N68 181 aa14.2□□□□□ -0.14
HDAC11-217ENST00000475818 RGS10O43665 173 aa14.19□□□□□ -0.14
HDAC11-217ENST00000475818 HBE1P02100 147 aa14.19□□□□□ -0.14
HDAC11-217ENST00000475818 DLK1P80370 383 aa14.19□□□□□ -0.14
HDAC11-217ENST00000475818 TIGITQ495A1 244 aa14.19□□□□□ -0.14
HDAC11-217ENST00000475818 C22orf42Q6IC83 251 aa14.19□□□□□ -0.14
HDAC11-217ENST00000475818 LINC00588Q9Y4M8 146 aa14.19□□□□□ -0.14
HDAC11-217ENST00000475818 MEIS3P1A6NDR6 274 aa14.18□□□□□ -0.14
HDAC11-217ENST00000475818 CLN5O75503 358 aa14.18□□□□□ -0.14
HDAC11-217ENST00000475818 CCL18P55774 89 aa14.18□□□□□ -0.14
HDAC11-217ENST00000475818 HSPE1P61604 102 aaKnown RBP14.18□□□□□ -0.14
HDAC11-217ENST00000475818 MLANAQ16655 118 aa14.18□□□□□ -0.14
HDAC11-217ENST00000475818 H2BFWTQ7Z2G1 175 aa14.18□□□□□ -0.14
HDAC11-217ENST00000475818 LYPD1Q8N2G4 141 aa14.18□□□□□ -0.14
HDAC11-217ENST00000475818 OR5AP2Q8NGF4 316 aa14.18□□□□□ -0.14
HDAC11-217ENST00000475818 C7orf50Q9BRJ6 194 aaKnown RBP14.18□□□□□ -0.14
HDAC11-217ENST00000475818 RHBDL2Q9NX52 303 aa14.18□□□□□ -0.14
HDAC11-217ENST00000475818 EHFQ9NZC4 300 aa14.18□□□□□ -0.14
HDAC11-217ENST00000475818 DAPK2Q9UIK4 370 aa14.18□□□□□ -0.14
HDAC11-217ENST00000475818 TPRKBQ9Y3C4 175 aa14.18□□□□□ -0.14
HDAC11-217ENST00000475818 U3KQE9 123 aa14.18□□□□□ -0.14
HDAC11-217ENST00000475818 SNCAP37840 140 aa14.17□□□□□ -0.14
HDAC11-217ENST00000475818 AP2S1P53680 142 aaPredicted RBP14.17□□□□□ -0.14
HDAC11-217ENST00000475818 FRZBQ92765 325 aa14.17□□□□□ -0.14
HDAC11-217ENST00000475818 ZNF2Q9BSG1 426 aaPredicted RBP14.17□□□□□ -0.14
HDAC11-217ENST00000475818 KRTAP1-5Q9BYS1 174 aa14.17□□□□□ -0.14
HDAC11-217ENST00000475818 NRN1Q9NPD7 142 aa14.17□□□□□ -0.14
HDAC11-217ENST00000475818 GOLT1BQ9Y3E0 138 aa14.17□□□□□ -0.14
HDAC11-217ENST00000475818 NOTOA8MTQ0 251 aa14.16□□□□□ -0.14
HDAC11-217ENST00000475818 IGKV1-17P01599 117 aa14.16□□□□□ -0.14
HDAC11-217ENST00000475818 HNRNPCP07910 306 aaKnown RBP eCLIP14.16□□□□□ -0.14
HDAC11-217ENST00000475818 FUSP35637 526 aaKnown RBP eCLIP14.16□□□□□ -0.14
HDAC11-217ENST00000475818 CMTM1Q8IZ96 169 aa14.16□□□□□ -0.14
HDAC11-217ENST00000475818 C1orf158Q8N1D5 194 aa14.16□□□□□ -0.14
HDAC11-217ENST00000475818 ZNF709Q8N972 641 aa14.16□□□□□ -0.14
HDAC11-217ENST00000475818 SEC22AQ96IW7 307 aa14.16□□□□□ -0.14
HDAC11-217ENST00000475818 SLC35B3Q9H1N7 401 aa14.16□□□□□ -0.14
HDAC11-217ENST00000475818 DUSP21Q9H596 190 aa14.16□□□□□ -0.14
HDAC11-217ENST00000475818 FNDC4Q9H6D8 234 aaPredicted RBP14.16□□□□□ -0.14
HDAC11-217ENST00000475818 VPS13BQ7Z7G8 4022 aa14.15□□□□□ -0.14
HDAC11-217ENST00000475818 TRDV1A0A1B0GX56 115 aa14.15□□□□□ -0.14
HDAC11-217ENST00000475818 NKX2-1P43699 371 aaPredicted RBP14.15□□□□□ -0.14
HDAC11-217ENST00000475818 XGP55808 180 aa14.15□□□□□ -0.14
HDAC11-217ENST00000475818 IZUMO4Q1ZYL8 232 aa14.15□□□□□ -0.14
HDAC11-217ENST00000475818 RRN3P1Q2M238 152 aa14.15□□□□□ -0.14
HDAC11-217ENST00000475818 PHLDA2Q53GA4 152 aa14.15□□□□□ -0.14
HDAC11-217ENST00000475818 OR4B1Q8NGF8 309 aa14.15□□□□□ -0.14
HDAC11-217ENST00000475818 FXYD6Q9H0Q3 95 aa14.15□□□□□ -0.14
HDAC11-217ENST00000475818 F5H768 121 aa14.14□□□□□ -0.15
HDAC11-217ENST00000475818 GPR31O00270 319 aa14.14□□□□□ -0.15
HDAC11-217ENST00000475818 SCGB2A1O75556 95 aa14.14□□□□□ -0.15
HDAC11-217ENST00000475818 IGKV1-39P01597 117 aa14.14□□□□□ -0.15
HDAC11-217ENST00000475818 IGKV1D-39P04432 117 aa14.14□□□□□ -0.15
HDAC11-217ENST00000475818 OPRK1P41145 380 aa14.14□□□□□ -0.15
HDAC11-217ENST00000475818 RFX2P48378 723 aa14.14□□□□□ -0.15
HDAC11-217ENST00000475818 OR4X1Q8NH49 305 aa14.14□□□□□ -0.15
HDAC11-217ENST00000475818 MRGPRFQ96AM1 343 aa14.14□□□□□ -0.15
HDAC11-217ENST00000475818 SEPSECSQ9HD40 501 aaKnown RBP14.14□□□□□ -0.15
HDAC11-217ENST00000475818 RNASE2P10153 161 aaKnown RBP14.13□□□□□ -0.15
HDAC11-217ENST00000475818 BTF3P20290 206 aaKnown RBP14.13□□□□□ -0.15
HDAC11-217ENST00000475818 SIGLEC15Q6ZMC9 328 aa14.13□□□□□ -0.15
HDAC11-217ENST00000475818 SSX7Q7RTT5 188 aa14.13□□□□□ -0.15
HDAC11-217ENST00000475818 SLC35G3Q8N808 338 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms