RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 OR4A5Q8NH83 315 aa11.33□□□□□ -0.6
UBXN11-214ENST00000475591 C11orf52Q96A22 123 aa11.33□□□□□ -0.6
UBXN11-214ENST00000475591 HIST1H2BLQ99880 126 aa11.33□□□□□ -0.6
UBXN11-214ENST00000475591 IGKV1D-37A0A075B6S9 117 aa11.33□□□□□ -0.6
UBXN11-214ENST00000475591 IGHV3-21A0A0B4J1V1 117 aa11.33□□□□□ -0.6
UBXN11-214ENST00000475591 XKRY2A2RUG3 117 aa11.33□□□□□ -0.6
UBXN11-214ENST00000475591 PSMB11A5LHX3 300 aa11.33□□□□□ -0.6
UBXN11-214ENST00000475591 CD99P14209 185 aa11.33□□□□□ -0.6
UBXN11-214ENST00000475591 ATP5IP56385 69 aaPredicted RBP11.33□□□□□ -0.6
UBXN11-214ENST00000475591 ZNF672Q499Z4 452 aaPredicted RBP11.33□□□□□ -0.6
UBXN11-214ENST00000475591 SLC25A33Q9BSK2 321 aa11.33□□□□□ -0.6
UBXN11-214ENST00000475591 PITPNC1Q9UKF7 332 aa11.33□□□□□ -0.6
UBXN11-214ENST00000475591 ABCA4P78363 2273 aa11.33□□□□□ -0.6
UBXN11-214ENST00000475591 ASH1LQ9NR48 2969 aaKnown RBP11.32□□□□□ -0.6
UBXN11-214ENST00000475591 ANKHD1Q8IWZ3 2542 aaKnown RBP11.32□□□□□ -0.6
UBXN11-214ENST00000475591 IGLV1-47P01700 117 aa11.32□□□□□ -0.6
UBXN11-214ENST00000475591 IGHV2-70P01814 119 aa11.32□□□□□ -0.6
UBXN11-214ENST00000475591 AREGP15514 252 aa11.32□□□□□ -0.6
UBXN11-214ENST00000475591 MFAP2P55001 183 aa11.32□□□□□ -0.6
UBXN11-214ENST00000475591 CACNG8Q8WXS5 425 aa11.32□□□□□ -0.6
UBXN11-214ENST00000475591 SLC25A2Q9BXI2 301 aa11.32□□□□□ -0.6
UBXN11-214ENST00000475591 TRBV23-1A0A0A0MS06 115 aa11.32□□□□□ -0.6
UBXN11-214ENST00000475591 INS-IGF2F8WCM5 200 aa11.32□□□□□ -0.6
UBXN11-214ENST00000475591 TYMSP04818 313 aa11.32□□□□□ -0.6
UBXN11-214ENST00000475591 MC5RP33032 325 aa11.32□□□□□ -0.6
UBXN11-214ENST00000475591 GPX4P36969 197 aaPredicted RBP11.32□□□□□ -0.6
UBXN11-214ENST00000475591 TNXAQ16473 311 aa11.32□□□□□ -0.6
UBXN11-214ENST00000475591 OR10G8Q8NGN5 311 aa11.32□□□□□ -0.6
UBXN11-214ENST00000475591 EAF1Q96JC9 268 aaPredicted RBP11.32□□□□□ -0.6
UBXN11-214ENST00000475591 FAM167A-AS1Q96KT0 104 aa11.32□□□□□ -0.6
UBXN11-214ENST00000475591 TMEM167BQ9NRX6 74 aa11.32□□□□□ -0.6
UBXN11-214ENST00000475591 PPIAL4CA0A0B4J2A2 164 aa11.31□□□□□ -0.6
UBXN11-214ENST00000475591 IGLC7A0M8Q6 106 aa11.31□□□□□ -0.6
UBXN11-214ENST00000475591 MOSP00540 346 aa11.31□□□□□ -0.6
UBXN11-214ENST00000475591 C8orf88P0DMB2 117 aa11.31□□□□□ -0.6
UBXN11-214ENST00000475591 PPIAL4GP0DN37 164 aa11.31□□□□□ -0.6
UBXN11-214ENST00000475591 PYYP10082 97 aa11.31□□□□□ -0.6
UBXN11-214ENST00000475591 SUMO1P63165 101 aaKnown RBP11.31□□□□□ -0.6
UBXN11-214ENST00000475591 PATE2Q6UY27 113 aa11.31□□□□□ -0.6
UBXN11-214ENST00000475591 TMEM183AQ8IXX5 376 aa11.31□□□□□ -0.6
UBXN11-214ENST00000475591 OR1P1Q8NH06 330 aa11.31□□□□□ -0.6
UBXN11-214ENST00000475591 PACRGQ96M98 296 aaPredicted RBP11.31□□□□□ -0.6
UBXN11-214ENST00000475591 IGHV1-3A0A0C4DH29 117 aa11.31□□□□□ -0.6
UBXN11-214ENST00000475591 RPL15P61313 204 aaKnown RBP11.31□□□□□ -0.6
UBXN11-214ENST00000475591 FBXL19-AS1Q494R0 122 aa11.31□□□□□ -0.6
UBXN11-214ENST00000475591 CENPWQ5EE01 88 aa11.31□□□□□ -0.6
UBXN11-214ENST00000475591 ASPHD1Q5U4P2 390 aa11.31□□□□□ -0.6
UBXN11-214ENST00000475591 PQLC2Q6ZP29 291 aa11.31□□□□□ -0.6
UBXN11-214ENST00000475591 MISP3Q96FF7 219 aa11.31□□□□□ -0.6
UBXN11-214ENST00000475591 INSIG2Q9Y5U4 225 aa11.31□□□□□ -0.6
UBXN11-214ENST00000475591 A0A1B0GUS0 222 aa11.3□□□□□ -0.6
UBXN11-214ENST00000475591 BUB1B-PAK6H3BSN5 160 aa11.3□□□□□ -0.6
UBXN11-214ENST00000475591 NHLH1Q02575 133 aa11.3□□□□□ -0.6
UBXN11-214ENST00000475591 LDLRAD2Q5SZI1 272 aa11.3□□□□□ -0.6
UBXN11-214ENST00000475591 OR5AU1Q8NGC0 362 aa11.3□□□□□ -0.6
UBXN11-214ENST00000475591 RNASEH2CQ8TDP1 164 aaKnown RBP11.3□□□□□ -0.6
UBXN11-214ENST00000475591 DNAJC4Q9NNZ3 241 aa11.3□□□□□ -0.6
UBXN11-214ENST00000475591 HELTA6NFD8 242 aa11.3□□□□□ -0.6
UBXN11-214ENST00000475591 C22orf46C9J442 243 aa11.3□□□□□ -0.6
UBXN11-214ENST00000475591 AMBPP02760 352 aa11.3□□□□□ -0.6
UBXN11-214ENST00000475591 FRMD6-AS1P0C7T7 363 aa11.3□□□□□ -0.6
UBXN11-214ENST00000475591 LGALS7P47929 136 aa11.3□□□□□ -0.6
UBXN11-214ENST00000475591 LCN2P80188 198 aa11.3□□□□□ -0.6
UBXN11-214ENST00000475591 FOXL1Q12952 345 aa11.3□□□□□ -0.6
UBXN11-214ENST00000475591 ST6GALNAC3Q8NDV1 305 aa11.3□□□□□ -0.6
UBXN11-214ENST00000475591 CLEC7AQ9BXN2 247 aa11.3□□□□□ -0.6
UBXN11-214ENST00000475591 ZNF355PQ9NSJ1 428 aa11.3□□□□□ -0.6
UBXN11-214ENST00000475591 ONECUT1Q9UBC0 465 aa11.3□□□□□ -0.6
UBXN11-214ENST00000475591 ARHGAP32A7KAX9 2087 aa11.29□□□□□ -0.6
UBXN11-214ENST00000475591 COX7A2P2O60397 106 aa11.29□□□□□ -0.6
UBXN11-214ENST00000475591 RNF224P0DH78 156 aa11.29□□□□□ -0.6
UBXN11-214ENST00000475591 TAS2R45P59539 299 aa11.29□□□□□ -0.6
UBXN11-214ENST00000475591 UBE2L3P68036 154 aaKnown RBP11.29□□□□□ -0.6
UBXN11-214ENST00000475591 KLRB1Q12918 225 aa11.29□□□□□ -0.6
UBXN11-214ENST00000475591 PNKDQ8N490 385 aa11.29□□□□□ -0.6
UBXN11-214ENST00000475591 LINC00479Q96M42 142 aa11.29□□□□□ -0.6
UBXN11-214ENST00000475591 TCRBV4S1A1TA0A5B7 111 aa11.29□□□□□ -0.6
UBXN11-214ENST00000475591 C9JCJ5 164 aa11.29□□□□□ -0.6
UBXN11-214ENST00000475591 CRYGBP07316 175 aa11.29□□□□□ -0.6
UBXN11-214ENST00000475591 RPL27AP46776 148 aaKnown RBP11.29□□□□□ -0.6
UBXN11-214ENST00000475591 GNG4P50150 75 aa11.29□□□□□ -0.6
UBXN11-214ENST00000475591 SUB1P53999 127 aaKnown RBP eCLIP11.29□□□□□ -0.6
UBXN11-214ENST00000475591 PRRX1P54821 245 aa11.29□□□□□ -0.6
UBXN11-214ENST00000475591 FBXL15Q9H469 300 aa11.29□□□□□ -0.6
UBXN11-214ENST00000475591 GSX1Q9H4S2 264 aaPredicted RBP11.29□□□□□ -0.6
UBXN11-214ENST00000475591 SIGLEC9Q9Y336 463 aa11.29□□□□□ -0.6
UBXN11-214ENST00000475591 TRAPPC1Q9Y5R8 145 aa11.29□□□□□ -0.6
UBXN11-214ENST00000475591 SPTBN4Q9H254 2564 aa11.28□□□□□ -0.6
UBXN11-214ENST00000475591 FCN1O00602 326 aa11.28□□□□□ -0.6
UBXN11-214ENST00000475591 C10orf113Q5VZT2 155 aa11.28□□□□□ -0.6
UBXN11-214ENST00000475591 NHLRC2Q8NBF2 726 aa11.28□□□□□ -0.6
UBXN11-214ENST00000475591 IMMP2LQ96T52 175 aa11.28□□□□□ -0.6
UBXN11-214ENST00000475591 C19orf24Q9BVV8 132 aa11.28□□□□□ -0.6
UBXN11-214ENST00000475591 RNASE7Q9H1E1 156 aaKnown RBP11.28□□□□□ -0.6
UBXN11-214ENST00000475591 ERVFC1-1P60608 527 aa11.28□□□□□ -0.6
UBXN11-214ENST00000475591 TEX45Q8NA69 505 aa11.28□□□□□ -0.6
UBXN11-214ENST00000475591 FXYD3Q14802 87 aa11.27□□□□□ -0.61
UBXN11-214ENST00000475591 MMD2Q8IY49 270 aa11.27□□□□□ -0.61
UBXN11-214ENST00000475591 THAP8Q8NA92 274 aa11.27□□□□□ -0.61
UBXN11-214ENST00000475591 RPEQ96AT9 228 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms