RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 SPANXN3Q5MJ09 141 aa2.35□□□□□ -2.03
TM9SF3-204ENST00000475401 SKA2Q8WVK7 121 aaPredicted RBP2.35□□□□□ -2.03
TM9SF3-204ENST00000475401 MIEN1Q9BRT3 115 aa2.35□□□□□ -2.03
TM9SF3-204ENST00000475401 TXNL4BQ9NX01 149 aaKnown RBP2.35□□□□□ -2.03
TM9SF3-204ENST00000475401 PCNX2A6NKB5 2137 aa2.35□□□□□ -2.03
TM9SF3-204ENST00000475401 PTPRSQ13332 1948 aa2.34□□□□□ -2.03
TM9SF3-204ENST00000475401 DENND4CQ5VZ89 1909 aa2.34□□□□□ -2.03
TM9SF3-204ENST00000475401 UHRF1BP1Q6BDS2 1440 aa2.34□□□□□ -2.03
TM9SF3-204ENST00000475401 DUXBA0A1W2PPF3 345 aa2.34□□□□□ -2.03
TM9SF3-204ENST00000475401 E7EQ34 232 aa2.34□□□□□ -2.03
TM9SF3-204ENST00000475401 CDS2O95674 445 aa2.34□□□□□ -2.03
TM9SF3-204ENST00000475401 PPBPP02775 128 aa2.34□□□□□ -2.03
TM9SF3-204ENST00000475401 CASP1P29466 404 aa2.34□□□□□ -2.03
TM9SF3-204ENST00000475401 EVX1P49640 407 aa2.34□□□□□ -2.03
TM9SF3-204ENST00000475401 DEFB115Q30KQ5 88 aa2.34□□□□□ -2.03
TM9SF3-204ENST00000475401 LYRM7Q5U5X0 104 aa2.34□□□□□ -2.03
TM9SF3-204ENST00000475401 CLVS1Q8IUQ0 354 aaPredicted RBP2.34□□□□□ -2.03
TM9SF3-204ENST00000475401 OR52R1Q8NGF1 315 aa2.34□□□□□ -2.03
TM9SF3-204ENST00000475401 GRPEL2Q8TAA5 225 aa2.34□□□□□ -2.03
TM9SF3-204ENST00000475401 EFCAB11Q9BUY7 163 aa2.34□□□□□ -2.03
TM9SF3-204ENST00000475401 SPANXA1Q9NS26 97 aa2.34□□□□□ -2.03
TM9SF3-204ENST00000475401 GGT3PA6NGU5 568 aa2.33□□□□□ -2.04
TM9SF3-204ENST00000475401 TXNDC9O14530 226 aa2.33□□□□□ -2.04
TM9SF3-204ENST00000475401 TP53I11O14683 189 aa2.33□□□□□ -2.04
TM9SF3-204ENST00000475401 ARPC5O15511 151 aa2.33□□□□□ -2.04
TM9SF3-204ENST00000475401 GNRH2O43555 120 aa2.33□□□□□ -2.04
TM9SF3-204ENST00000475401 PFDN1O60925 122 aa2.33□□□□□ -2.04
TM9SF3-204ENST00000475401 APOA2P02652 100 aa2.33□□□□□ -2.04
TM9SF3-204ENST00000475401 IGKV1-16P04430 117 aa2.33□□□□□ -2.04
TM9SF3-204ENST00000475401 UCHL1P09936 223 aa2.33□□□□□ -2.04
TM9SF3-204ENST00000475401 RPS28P62857 69 aaKnown RBP2.33□□□□□ -2.04
TM9SF3-204ENST00000475401 SAMD13Q5VXD3 122 aa2.33□□□□□ -2.04
TM9SF3-204ENST00000475401 ZNF705AQ6ZN79 300 aaPredicted RBP2.33□□□□□ -2.04
TM9SF3-204ENST00000475401 ADAT3Q96EY9 351 aaPredicted RBP2.33□□□□□ -2.04
TM9SF3-204ENST00000475401 CARD19Q96LW7 228 aa2.33□□□□□ -2.04
TM9SF3-204ENST00000475401 RTL8AQ9BWD3 113 aa2.33□□□□□ -2.04
TM9SF3-204ENST00000475401 C6orf62Q9GZU0 229 aaPredicted RBP2.33□□□□□ -2.04
TM9SF3-204ENST00000475401 HSPE1-MOB4S4R3N1 261 aa2.33□□□□□ -2.04
TM9SF3-204ENST00000475401 ADGBQ8N7X0 1667 aa2.33□□□□□ -2.04
TM9SF3-204ENST00000475401 CEP152O94986 1710 aa2.33□□□□□ -2.04
TM9SF3-204ENST00000475401 WDR90Q96KV7 1748 aa2.33□□□□□ -2.04
TM9SF3-204ENST00000475401 TOPBP1Q92547 1522 aa2.32□□□□□ -2.04
TM9SF3-204ENST00000475401 A0A087WX48 190 aa2.32□□□□□ -2.04
TM9SF3-204ENST00000475401 TRGV5A0A0B4J1U4 118 aa2.32□□□□□ -2.04
TM9SF3-204ENST00000475401 IGKV1-9A0A0C4DH69 117 aa2.32□□□□□ -2.04
TM9SF3-204ENST00000475401 SDHAF1A6NFY7 115 aa2.32□□□□□ -2.04
TM9SF3-204ENST00000475401 ZNF860A6NHJ4 632 aa2.32□□□□□ -2.04
TM9SF3-204ENST00000475401 M0R378 163 aa2.32□□□□□ -2.04
TM9SF3-204ENST00000475401 MSMBP08118 114 aa2.32□□□□□ -2.04
TM9SF3-204ENST00000475401 C10orf126Q8N4M7 172 aa2.32□□□□□ -2.04
TM9SF3-204ENST00000475401 OR5J2Q8NH18 312 aa2.32□□□□□ -2.04
TM9SF3-204ENST00000475401 PFN4Q8NHR9 129 aa2.32□□□□□ -2.04
TM9SF3-204ENST00000475401 DCANP1Q8TF63 244 aa2.32□□□□□ -2.04
TM9SF3-204ENST00000475401 THEM6Q8WUY1 208 aa2.32□□□□□ -2.04
TM9SF3-204ENST00000475401 IMMP2LQ96T52 175 aa2.32□□□□□ -2.04
TM9SF3-204ENST00000475401 AIF1LQ9BQI0 150 aa2.32□□□□□ -2.04
TM9SF3-204ENST00000475401 CCDC32Q9BV29 185 aa2.32□□□□□ -2.04
TM9SF3-204ENST00000475401 JPT1Q9UK76 154 aa2.32□□□□□ -2.04
TM9SF3-204ENST00000475401 OR52A1Q9UKL2 312 aa2.32□□□□□ -2.04
TM9SF3-204ENST00000475401 ERGIC3Q9Y282 383 aa2.32□□□□□ -2.04
TM9SF3-204ENST00000475401 MINOS1-NBL1R4GNA1 71 aa2.32□□□□□ -2.04
TM9SF3-204ENST00000475401 SLX4Q8IY92 1834 aa2.31□□□□□ -2.04
TM9SF3-204ENST00000475401 A0A1W2PNM2 257 aa2.31□□□□□ -2.04
TM9SF3-204ENST00000475401 C11orf86A6NJI1 115 aa2.31□□□□□ -2.04
TM9SF3-204ENST00000475401 C3orf84H3BNL1 204 aa2.31□□□□□ -2.04
TM9SF3-204ENST00000475401 BANF1O75531 89 aa2.31□□□□□ -2.04
TM9SF3-204ENST00000475401 CTSGP08311 255 aa2.31□□□□□ -2.04
TM9SF3-204ENST00000475401 RNASE4P34096 147 aaKnown RBP2.31□□□□□ -2.04
TM9SF3-204ENST00000475401 RPL28P46779 137 aaKnown RBP2.31□□□□□ -2.04
TM9SF3-204ENST00000475401 TPI1P60174 286 aa2.31□□□□□ -2.04
TM9SF3-204ENST00000475401 YPEL3P61236 119 aaPredicted RBP2.31□□□□□ -2.04
TM9SF3-204ENST00000475401 ZNF767PQ75MW2 155 aa2.31□□□□□ -2.04
TM9SF3-204ENST00000475401 TMEM86AQ8N2M4 240 aa2.31□□□□□ -2.04
TM9SF3-204ENST00000475401 ST6GALNAC3Q8NDV1 305 aa2.31□□□□□ -2.04
TM9SF3-204ENST00000475401 OR9Q1Q8NGQ5 310 aa2.31□□□□□ -2.04
TM9SF3-204ENST00000475401 WFDC5Q8TCV5 224 aa2.31□□□□□ -2.04
TM9SF3-204ENST00000475401 MAFIPQ8WZ33 124 aa2.31□□□□□ -2.04
TM9SF3-204ENST00000475401 GPX7Q96SL4 187 aaPredicted RBP2.31□□□□□ -2.04
TM9SF3-204ENST00000475401 HSPB9Q9BQS6 159 aa2.31□□□□□ -2.04
TM9SF3-204ENST00000475401 OR2J1Q9GZK6 312 aa2.31□□□□□ -2.04
TM9SF3-204ENST00000475401 SLC39A9Q9NUM3 307 aa2.31□□□□□ -2.04
TM9SF3-204ENST00000475401 LAMTOR3Q9UHA4 124 aa2.31□□□□□ -2.04
TM9SF3-204ENST00000475401 PCTPQ9UKL6 214 aa2.31□□□□□ -2.04
TM9SF3-204ENST00000475401 ARHGEF10O15013 1369 aa2.31□□□□□ -2.04
TM9SF3-204ENST00000475401 MYH11P35749 1972 aa2.3□□□□□ -2.04
TM9SF3-204ENST00000475401 TRPM6Q9BX84 2022 aa2.3□□□□□ -2.04
TM9SF3-204ENST00000475401 TRAV7A0A075B6U4 112 aa2.3□□□□□ -2.04
TM9SF3-204ENST00000475401 TMEM212A6NML5 194 aa2.3□□□□□ -2.04
TM9SF3-204ENST00000475401 TAX1BP3O14907 124 aa2.3□□□□□ -2.04
TM9SF3-204ENST00000475401 CYB5BO43169 146 aa2.3□□□□□ -2.04
TM9SF3-204ENST00000475401 GPX2P18283 190 aa2.3□□□□□ -2.04
TM9SF3-204ENST00000475401 OGNP20774 298 aaKnown RBP2.3□□□□□ -2.04
TM9SF3-204ENST00000475401 S100A4P26447 101 aaKnown RBP2.3□□□□□ -2.04
TM9SF3-204ENST00000475401 POLR2HP52434 150 aaKnown RBP2.3□□□□□ -2.04
TM9SF3-204ENST00000475401 MIR17HGQ75NE6 70 aa2.3□□□□□ -2.04
TM9SF3-204ENST00000475401 ANGPTL5Q86XS5 388 aa2.3□□□□□ -2.04
TM9SF3-204ENST00000475401 RPP25LQ8N5L8 163 aaKnown RBP2.3□□□□□ -2.04
TM9SF3-204ENST00000475401 OR51T1Q8NGJ9 327 aa2.3□□□□□ -2.04
TM9SF3-204ENST00000475401 FGF13Q92913 245 aa2.3□□□□□ -2.04
TM9SF3-204ENST00000475401 TEX37Q96LM6 180 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms