RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 CRYGSP22914 178 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 EFEMP1Q12805 493 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 RTL8BQ17RB0 113 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 BEAN1Q3B7T3 259 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 PLPP4Q5VZY2 271 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 C22orf39Q6P5X5 142 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 DGAT2L6Q6ZPD8 337 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 TMEM179BQ7Z7N9 219 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 GTSCR1Q86UQ5 136 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 OR8B3Q8NGG8 313 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 DCANP1Q8TF63 244 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 PGLYRP2Q96PD5 576 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 MDFIQ99750 246 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 RTL8AQ9BWD3 113 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 GPATCH8Q9UKJ3 1502 aaKnown RBP2.76□□□□□ -1.97
UBR3-208ENST00000474426 DOCK1Q14185 1865 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 DIDO1Q9BTC0 2240 aaKnown RBP2.76□□□□□ -1.97
UBR3-208ENST00000474426 MYOM1P52179 1685 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 TEX50A0A1B0GTY4 177 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 J3QT63 122 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 HOXA3O43365 443 aaPredicted RBP2.76□□□□□ -1.97
UBR3-208ENST00000474426 PLA2G1BP04054 148 aaKnown RBP2.76□□□□□ -1.97
UBR3-208ENST00000474426 MED14OSP0DP75 135 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 RPL22P35268 128 aaKnown RBP2.76□□□□□ -1.97
UBR3-208ENST00000474426 TMEM30BQ3MIR4 351 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 RFLNBQ8N5W9 214 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 FXYD5Q96DB9 178 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 SHANK2-AS3Q9BTD1 123 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 CYSTM1Q9H1C7 97 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 MANBALQ9NQG1 85 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 C19orf73Q9NVV2 129 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 LSM2Q9Y333 95 aaKnown RBP2.76□□□□□ -1.97
UBR3-208ENST00000474426 COQ4Q9Y3A0 265 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 INSL5Q9Y5Q6 135 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 F11RQ9Y624 299 aaKnown RBP2.76□□□□□ -1.97
UBR3-208ENST00000474426 HEATR5AQ86XA9 2040 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 PKD1L3Q7Z443 1732 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 H3BMG7 143 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 GNGT2O14610 69 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 SCRG1O75711 98 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 NEURL1O76050 574 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 EGR2P11161 476 aaPredicted RBP2.76□□□□□ -1.97
UBR3-208ENST00000474426 ZNF564Q8TBZ8 553 aaPredicted RBP2.76□□□□□ -1.97
UBR3-208ENST00000474426 NT5CQ8TCD5 201 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 EIF5A2Q9GZV4 153 aaKnown RBP2.76□□□□□ -1.97
UBR3-208ENST00000474426 PXMP4Q9Y6I8 212 aa2.76□□□□□ -1.97
UBR3-208ENST00000474426 LAMA4Q16363 1823 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 LOC101059948A0A1B0GTJ6 334 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 LOC285095A0A1B0GVY8 99 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 LINC01619G3V211 115 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 PLK5Q496M5 336 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 FP248Q71RG6 208 aaPredicted RBP2.75□□□□□ -1.97
UBR3-208ENST00000474426 POM121L12Q8N7R1 296 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 CYB561D1Q8N8Q1 229 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 OR5H2Q8NGV7 314 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 OR52P1PQ8NH57 321 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 GTSF1Q8WW33 167 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 TMEM158Q8WZ71 300 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 TMEM70Q9BUB7 260 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 FAM208AQ9UK61 1670 aaKnown RBP2.75□□□□□ -1.97
UBR3-208ENST00000474426 ASXL1Q8IXJ9 1541 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 C10orf71Q711Q0 1435 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 DSPPQ9NZW4 1301 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 A8MWL6 223 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 H3BP45 60 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 LGALS9O00182 355 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 CD55P08174 381 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 ASIPP42127 132 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 KRTDAPP60985 99 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 MSMPQ1L6U9 139 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 ZNF324BQ6AW86 544 aaPredicted RBP2.75□□□□□ -1.97
UBR3-208ENST00000474426 C2orf91Q6ZV80 131 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 WDR86Q86TI4 376 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 MSRB3Q8IXL7 192 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 LINC01465Q8N7H1 131 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 OR10G2Q8NGC3 310 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 COL24A1Q17RW2 1714 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 KIDINS220Q9ULH0 1771 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 DYSFO75923 2080 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 KLF18A0A0U1RQI7 1052 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 C3orf85A0A1B0GTC6 90 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 LYRM9A8MSI8 78 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 A8MWV9 139 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 C17orf112F2Z3M2 114 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 APOC4-APOC2K7ER74 178 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 TCL1BO95988 128 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 ZNF688P0C7X2 276 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 C3orf79P0CE67 100 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 HBG1P69891 147 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 HBG2P69892 147 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 Q56UQ5 140 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 FAM213BQ8TBF2 198 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 C10orf105Q8TEF2 133 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 SDF2L1Q9HCN8 221 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 FAM30AQ9NZY2 134 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 ANAPC10Q9UM13 185 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 CICQ96RK0 1608 aaPredicted RBP2.75□□□□□ -1.97
UBR3-208ENST00000474426 PTPRBP23467 1997 aa2.75□□□□□ -1.97
UBR3-208ENST00000474426 PCSK5Q92824 1860 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 TRBV6-7A0A0A0MS04 114 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms