RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 PAX4O43316 350 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 SPRY2O43597 315 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 GPR137BO60478 399 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 CD58P19256 250 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 SFTPDP35247 375 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 MPV17P39210 176 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 LOXL3P58215 753 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 SNRPFP62306 86 aaKnown RBP4.12□□□□□ -1.75
COL3A1-205ENST00000470167 LRRC37A5PQ49AS3 106 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 Q56UQ5 140 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 LYRM7Q5U5X0 104 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 CFAP126Q5VTH2 177 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 FKBP1CQ5VVH2 108 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 ZNF793Q6ZN11 406 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 Q6ZS49 121 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 TEN1Q86WV5 123 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 BPIFA4PQ86YQ2 179 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 KRTAP19-1Q8IUB9 90 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 SBSPONQ8IVN8 264 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 OR10G2Q8NGC3 310 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 ZPLD1Q8TCW7 415 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 RPS4Y2Q8TD47 263 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 TMEM255BQ8WV15 326 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 FGF11Q92914 225 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 ZBTB45Q96K62 511 aaPredicted RBP4.12□□□□□ -1.75
COL3A1-205ENST00000470167 AGPAT4-IT1Q9H0P7 198 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 C16orf95Q9H693 158 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 PILRAQ9UKJ1 303 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 UNC80Q8N2C7 3258 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 ANKRD11Q6UB99 2663 aaPredicted RBP4.12□□□□□ -1.75
COL3A1-205ENST00000470167 SCN7AQ01118 1682 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 LY75O60449 1722 aa4.12□□□□□ -1.75
COL3A1-205ENST00000470167 PATJQ8NI35 1801 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 NCKAP5O14513 1909 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 CITO14578 2027 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 LMO7Q8WWI1 1683 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 A0A0J9YW62 118 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 A0A1B0GWB2 263 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 A0A1W2PS18 150 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 IZUMO1RA6ND01 250 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 SDCBPO00560 298 aaPredicted RBP4.11□□□□□ -1.75
COL3A1-205ENST00000470167 P01737 135 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 CD3DP04234 171 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 CD55P08174 381 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 SMIM13P0DJ93 91 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 COX7CP15954 63 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 HMGA2P52926 109 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 GFERP55789 205 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 UBE2G1P62253 170 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 TAF10Q12962 218 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 TMEM52BQ4KMG9 183 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 RNASE12Q5GAN4 147 aaKnown RBP4.11□□□□□ -1.75
COL3A1-205ENST00000470167 FHL5Q5TD97 284 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 NCBP2-AS2Q69YL0 99 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 ZNF324BQ6AW86 544 aaPredicted RBP4.11□□□□□ -1.75
COL3A1-205ENST00000470167 TMEM136Q6ZRR5 245 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 FAM57BQ71RH2 274 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 ZNF534Q76KX8 674 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 HSD11B1LQ7Z5J1 315 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 BAGE3Q86Y29 109 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 BAGE2Q86Y30 109 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 LINC01561Q8N1V8 128 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 KLHDC9Q8NEP7 349 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 PHLDA1Q8WV24 401 aaPredicted RBP4.11□□□□□ -1.75
COL3A1-205ENST00000470167 LINC01600Q96MT4 127 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 SHANK2-AS3Q9BTD1 123 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 TMEM147Q9BVK8 224 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 CACNG5Q9UF02 275 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 KCNE3Q9Y6H6 103 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 TOGARAM1Q9Y4F4 1720 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 GBF1Q92538 1859 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 TRIOBPQ9H2D6 2365 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 ALPK3Q96L96 1907 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 CCDC88CQ9P219 2028 aa4.11□□□□□ -1.75
COL3A1-205ENST00000470167 DUOX1Q9NRD9 1551 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 DOT1LQ8TEK3 1739 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 TRAV12-2A0A075B6T6 113 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 TRAV13-1A0A0B4J241 112 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 FAM240AA0A1B0GVK7 77 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 RBAKDNA6NC62 111 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 A8MWL6 223 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 TNFSF12O43508 249 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 FOXS1O43638 330 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 BUB3O43684 328 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 OR1I1O60431 355 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 TRACP01848 142 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 APOC2P02655 101 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 APOHP02749 345 aaPredicted RBP4.1□□□□□ -1.75
COL3A1-205ENST00000470167 CTLA4P16410 223 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 CFPP27918 469 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 PTGDSP41222 190 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 MTPNP58546 118 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 EFEMP1Q12805 493 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 FOXF2Q12947 444 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 ARFRP1Q13795 201 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 TRNP1Q6NT89 227 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 C22orf39Q6P5X5 142 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 NFE4Q86UQ8 179 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 PRR15Q8IV56 129 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 LINC00311Q8N616 119 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms