RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 OR5B3Q8NH48 314 aa11.65□□□□□ -0.55
DDX56-208ENST00000467318 SFT2D1Q8WV19 159 aa11.65□□□□□ -0.55
DDX56-208ENST00000467318 HIST1H2BAQ96A08 127 aa11.65□□□□□ -0.55
DDX56-208ENST00000467318 C16orf95Q9H693 158 aa11.65□□□□□ -0.55
DDX56-208ENST00000467318 FOXA2Q9Y261 457 aaPredicted RBP11.65□□□□□ -0.55
DDX56-208ENST00000467318 ZNF257Q9Y2Q1 563 aa11.65□□□□□ -0.55
DDX56-208ENST00000467318 TIMM9Q9Y5J7 89 aa11.65□□□□□ -0.55
DDX56-208ENST00000467318 PLXNB1O43157 2135 aa11.64□□□□□ -0.55
DDX56-208ENST00000467318 AP4M1O00189 453 aa11.64□□□□□ -0.55
DDX56-208ENST00000467318 IGF1P05019 195 aa11.64□□□□□ -0.55
DDX56-208ENST00000467318 SRP19P09132 144 aaKnown RBP11.64□□□□□ -0.55
DDX56-208ENST00000467318 OR13C7P0DN81 318 aa11.64□□□□□ -0.55
DDX56-208ENST00000467318 GNB1P62873 340 aa11.64□□□□□ -0.55
DDX56-208ENST00000467318 SSBP2P81877 361 aaPredicted RBP11.64□□□□□ -0.55
DDX56-208ENST00000467318 IZUMO4Q1ZYL8 232 aa11.64□□□□□ -0.55
DDX56-208ENST00000467318 AARDQ4LEZ3 155 aa11.64□□□□□ -0.55
DDX56-208ENST00000467318 Q6ZRM9 215 aa11.64□□□□□ -0.55
DDX56-208ENST00000467318 OR4F5Q8NH21 305 aa11.64□□□□□ -0.55
DDX56-208ENST00000467318 MBD3L1Q8WWY6 194 aa11.64□□□□□ -0.55
DDX56-208ENST00000467318 SRSF12Q8WXF0 261 aaKnown RBP11.64□□□□□ -0.55
DDX56-208ENST00000467318 ARPC1AQ92747 370 aa11.64□□□□□ -0.55
DDX56-208ENST00000467318 ZNF580Q9UK33 172 aa11.64□□□□□ -0.55
DDX56-208ENST00000467318 OR51B2Q9Y5P1 312 aa11.64□□□□□ -0.55
DDX56-208ENST00000467318 A0A087WWC5 75 aa11.63□□□□□ -0.55
DDX56-208ENST00000467318 RPL27AP46776 148 aaKnown RBP11.63□□□□□ -0.55
DDX56-208ENST00000467318 TMEM267Q0VDI3 215 aaPredicted RBP11.63□□□□□ -0.55
DDX56-208ENST00000467318 PMS2P11Q13670 270 aa11.63□□□□□ -0.55
DDX56-208ENST00000467318 LILRB2Q8N423 598 aa11.63□□□□□ -0.55
DDX56-208ENST00000467318 OR1L8Q8NGR8 309 aa11.63□□□□□ -0.55
DDX56-208ENST00000467318 SGMS2Q8NHU3 365 aa11.63□□□□□ -0.55
DDX56-208ENST00000467318 TMEM68Q96MH6 324 aa11.63□□□□□ -0.55
DDX56-208ENST00000467318 CIB3Q96Q77 187 aaPredicted RBP11.63□□□□□ -0.55
DDX56-208ENST00000467318 C2CD3Q4AC94 2353 aa11.63□□□□□ -0.55
DDX56-208ENST00000467318 B4DEV8 164 aa11.62□□□□□ -0.55
DDX56-208ENST00000467318 IFNA1P01562 189 aa11.62□□□□□ -0.55
DDX56-208ENST00000467318 VDAC2P45880 294 aaPredicted RBP11.62□□□□□ -0.55
DDX56-208ENST00000467318 CRIP2P52943 208 aaPredicted RBP11.62□□□□□ -0.55
DDX56-208ENST00000467318 OR2B8PP59922 312 aa11.62□□□□□ -0.55
DDX56-208ENST00000467318 HSPE1P61604 102 aaKnown RBP11.62□□□□□ -0.55
DDX56-208ENST00000467318 NDPQ00604 133 aa11.62□□□□□ -0.55
DDX56-208ENST00000467318 OR52E5Q8NH55 327 aa11.62□□□□□ -0.55
DDX56-208ENST00000467318 ABHD5Q8WTS1 349 aa11.62□□□□□ -0.55
DDX56-208ENST00000467318 RARRES2Q99969 163 aa11.62□□□□□ -0.55
DDX56-208ENST00000467318 QTRT1Q9BXR0 403 aaKnown RBP11.62□□□□□ -0.55
DDX56-208ENST00000467318 HSPB7Q9UBY9 170 aa11.62□□□□□ -0.55
DDX56-208ENST00000467318 TEX50A0A1B0GTY4 177 aa11.62□□□□□ -0.55
DDX56-208ENST00000467318 A0A1B0GUS0 222 aa11.62□□□□□ -0.55
DDX56-208ENST00000467318 CXorf65A6NEN9 183 aa11.62□□□□□ -0.55
DDX56-208ENST00000467318 LINC01548A6NM66 108 aa11.62□□□□□ -0.55
DDX56-208ENST00000467318 ATP6V0E1O15342 81 aa11.62□□□□□ -0.55
DDX56-208ENST00000467318 NDUFS6O75380 124 aaKnown RBP11.62□□□□□ -0.55
DDX56-208ENST00000467318 NXPH3O95157 252 aa11.62□□□□□ -0.55
DDX56-208ENST00000467318 IFNA17P01571 189 aa11.62□□□□□ -0.55
DDX56-208ENST00000467318 S100A6P06703 90 aa11.62□□□□□ -0.55
DDX56-208ENST00000467318 IAPPP10997 89 aa11.62□□□□□ -0.55
DDX56-208ENST00000467318 TAGLN2P37802 199 aaKnown RBP11.62□□□□□ -0.55
DDX56-208ENST00000467318 CCL20P78556 96 aa11.62□□□□□ -0.55
DDX56-208ENST00000467318 ICAM4Q14773 271 aa11.62□□□□□ -0.55
DDX56-208ENST00000467318 LINC01006Q8NI28 216 aa11.62□□□□□ -0.55
DDX56-208ENST00000467318 TVP23CQ96ET8 276 aa11.62□□□□□ -0.55
DDX56-208ENST00000467318 P2RX4Q99571 388 aa11.62□□□□□ -0.55
DDX56-208ENST00000467318 SRSF8Q9BRL6 282 aaKnown RBP11.62□□□□□ -0.55
DDX56-208ENST00000467318 NDUFA4L2Q9NRX3 87 aa11.62□□□□□ -0.55
DDX56-208ENST00000467318 LOC102723971A0A1B0GUV8 181 aa11.61□□□□□ -0.55
DDX56-208ENST00000467318 A0A1B0GV50 99 aa11.61□□□□□ -0.55
DDX56-208ENST00000467318 MBP02144 154 aa11.61□□□□□ -0.55
DDX56-208ENST00000467318 OPN1MWP04001 364 aa11.61□□□□□ -0.55
DDX56-208ENST00000467318 OPN1MW2P0DN77 364 aa11.61□□□□□ -0.55
DDX56-208ENST00000467318 OPN1MW3P0DN78 364 aa11.61□□□□□ -0.55
DDX56-208ENST00000467318 EGR2P11161 476 aaPredicted RBP11.61□□□□□ -0.55
DDX56-208ENST00000467318 SPCS3P61009 180 aa11.61□□□□□ -0.55
DDX56-208ENST00000467318 RUNX1Q01196 453 aa11.61□□□□□ -0.55
DDX56-208ENST00000467318 TNFRSF9Q07011 255 aa11.61□□□□□ -0.55
DDX56-208ENST00000467318 HAGHQ16775 308 aa11.61□□□□□ -0.55
DDX56-208ENST00000467318 PDLIM3Q53GG5 364 aaPredicted RBP11.61□□□□□ -0.55
DDX56-208ENST00000467318 TMEM41BQ5BJD5 291 aa11.61□□□□□ -0.55
DDX56-208ENST00000467318 C10orf55Q5SWW7 151 aa11.61□□□□□ -0.55
DDX56-208ENST00000467318 TMEM14EPQ6UXP3 125 aa11.61□□□□□ -0.55
DDX56-208ENST00000467318 NIPSNAP3BQ9BS92 247 aa11.61□□□□□ -0.55
DDX56-208ENST00000467318 FAM103A1Q9BTL3 118 aaKnown RBP11.61□□□□□ -0.55
DDX56-208ENST00000467318 RBKSQ9H477 322 aa11.61□□□□□ -0.55
DDX56-208ENST00000467318 SERTAD4Q9NUC0 356 aa11.61□□□□□ -0.55
DDX56-208ENST00000467318 PUS1Q9Y606 427 aaKnown RBP eCLIP11.61□□□□□ -0.55
DDX56-208ENST00000467318 E7EUB6 86 aa11.6□□□□□ -0.55
DDX56-208ENST00000467318 H3BP45 60 aa11.6□□□□□ -0.55
DDX56-208ENST00000467318 H3BQ15 152 aa11.6□□□□□ -0.55
DDX56-208ENST00000467318 OR2C1O95371 312 aa11.6□□□□□ -0.55
DDX56-208ENST00000467318 METTL15P1P0C7V9 234 aa11.6□□□□□ -0.55
DDX56-208ENST00000467318 RAB5AP20339 215 aa11.6□□□□□ -0.55
DDX56-208ENST00000467318 AKR1D1P51857 326 aa11.6□□□□□ -0.55
DDX56-208ENST00000467318 PRCDQ00LT1 54 aa11.6□□□□□ -0.55
DDX56-208ENST00000467318 SLC38A11Q08AI6 406 aa11.6□□□□□ -0.55
DDX56-208ENST00000467318 FOXL1Q12952 345 aa11.6□□□□□ -0.55
DDX56-208ENST00000467318 SPANXN5Q5MJ07 72 aa11.6□□□□□ -0.55
DDX56-208ENST00000467318 CENPVQ7Z7K6 275 aaPredicted RBP11.6□□□□□ -0.55
DDX56-208ENST00000467318 C1QL4Q86Z23 238 aa11.6□□□□□ -0.55
DDX56-208ENST00000467318 MRPL41Q8IXM3 137 aaKnown RBP11.6□□□□□ -0.55
DDX56-208ENST00000467318 WDR61Q9GZS3 305 aaKnown RBP11.6□□□□□ -0.55
DDX56-208ENST00000467318 A0A1W2PN81 502 aa11.59□□□□□ -0.55
DDX56-208ENST00000467318 CLPSL1A2RUU4 121 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms