RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 DUSP18Q8NEJ0 188 aa7.07□□□□□ -1.28
USP39-212ENST00000465514 GPX8Q8TED1 209 aa7.07□□□□□ -1.28
USP39-212ENST00000465514 MRGPRFQ96AM1 343 aa7.07□□□□□ -1.28
USP39-212ENST00000465514 GINS3Q9BRX5 216 aa7.07□□□□□ -1.28
USP39-212ENST00000465514 MS4A6AQ9H2W1 248 aa7.07□□□□□ -1.28
USP39-212ENST00000465514 VSIRQ9H7M9 311 aa7.07□□□□□ -1.28
USP39-212ENST00000465514 FLG2Q5D862 2391 aaPredicted RBP7.06□□□□□ -1.28
USP39-212ENST00000465514 IGHV4-4A0A075B6R2 117 aa7.06□□□□□ -1.28
USP39-212ENST00000465514 NPBWR1P48145 328 aa7.06□□□□□ -1.28
USP39-212ENST00000465514 UCP3P55916 312 aa7.06□□□□□ -1.28
USP39-212ENST00000465514 LGALS9BQ3B8N2 356 aa7.06□□□□□ -1.28
USP39-212ENST00000465514 KCTD21Q4G0X4 260 aa7.06□□□□□ -1.28
USP39-212ENST00000465514 ZNF600Q6ZNG1 722 aa7.06□□□□□ -1.28
USP39-212ENST00000465514 SNX29P2Q8IUI4 249 aa7.06□□□□□ -1.28
USP39-212ENST00000465514 FAM24BQ8N5W8 94 aa7.06□□□□□ -1.28
USP39-212ENST00000465514 POM121L12Q8N7R1 296 aa7.06□□□□□ -1.28
USP39-212ENST00000465514 YIPF6Q96EC8 236 aa7.06□□□□□ -1.28
USP39-212ENST00000465514 PUS1Q9Y606 427 aaKnown RBP eCLIP7.06□□□□□ -1.28
USP39-212ENST00000465514 TRAV2A0A0B4J234 112 aa7.05□□□□□ -1.28
USP39-212ENST00000465514 A0A0B4J293 547 aa7.05□□□□□ -1.28
USP39-212ENST00000465514 A0A1B0GU03 582 aa7.05□□□□□ -1.28
USP39-212ENST00000465514 SMIM31A0A1B0GVY4 71 aa7.05□□□□□ -1.28
USP39-212ENST00000465514 TMEM50AO95807 157 aa7.05□□□□□ -1.28
USP39-212ENST00000465514 RCVRNP35243 200 aa7.05□□□□□ -1.28
USP39-212ENST00000465514 SNCAP37840 140 aa7.05□□□□□ -1.28
USP39-212ENST00000465514 SCPEP1Q9HB40 452 aa7.05□□□□□ -1.28
USP39-212ENST00000465514 COMMD3Q9UBI1 195 aa7.05□□□□□ -1.28
USP39-212ENST00000465514 RABAC1Q9UI14 185 aa7.05□□□□□ -1.28
USP39-212ENST00000465514 C11orf94C9JXX5 98 aa7.04□□□□□ -1.28
USP39-212ENST00000465514 M0QYG6 137 aa7.04□□□□□ -1.28
USP39-212ENST00000465514 IFNA17P01571 189 aa7.04□□□□□ -1.28
USP39-212ENST00000465514 IGKV1-5P01602 117 aa7.04□□□□□ -1.28
USP39-212ENST00000465514 APOA1P02647 267 aa7.04□□□□□ -1.28
USP39-212ENST00000465514 GIG44P09565 113 aaPredicted RBP7.04□□□□□ -1.28
USP39-212ENST00000465514 P0C879 139 aa7.04□□□□□ -1.28
USP39-212ENST00000465514 PI3P19957 117 aa7.04□□□□□ -1.28
USP39-212ENST00000465514 NPPCP23582 126 aa7.04□□□□□ -1.28
USP39-212ENST00000465514 PVRIGQ6DKI7 326 aa7.04□□□□□ -1.28
USP39-212ENST00000465514 STHQ8IWL8 128 aa7.04□□□□□ -1.28
USP39-212ENST00000465514 SLC35G3Q8N808 338 aa7.04□□□□□ -1.28
USP39-212ENST00000465514 Q8NAQ8 132 aa7.04□□□□□ -1.28
USP39-212ENST00000465514 TMEM231Q9H6L2 316 aa7.04□□□□□ -1.28
USP39-212ENST00000465514 DNAH5Q8TE73 4624 aa7.04□□□□□ -1.28
USP39-212ENST00000465514 IGLV2-18A0A075B6J9 118 aa7.03□□□□□ -1.28
USP39-212ENST00000465514 IGHV4-28A0A0C4DH34 117 aa7.03□□□□□ -1.28
USP39-212ENST00000465514 A0A1W2PS18 150 aa7.03□□□□□ -1.28
USP39-212ENST00000465514 INS-IGF2F8WCM5 200 aa7.03□□□□□ -1.28
USP39-212ENST00000465514 K7EQG2 157 aa7.03□□□□□ -1.28
USP39-212ENST00000465514 RBMY1A1P0DJD3 496 aaKnown RBP7.03□□□□□ -1.28
USP39-212ENST00000465514 RBMY1CP0DJD4 496 aa7.03□□□□□ -1.28
USP39-212ENST00000465514 INAFM2P0DMQ5 153 aa7.03□□□□□ -1.28
USP39-212ENST00000465514 RNASE2P10153 161 aaKnown RBP7.03□□□□□ -1.28
USP39-212ENST00000465514 PGAM2P15259 253 aa7.03□□□□□ -1.28
USP39-212ENST00000465514 ELK1P19419 428 aa7.03□□□□□ -1.28
USP39-212ENST00000465514 ETV6P41212 452 aa7.03□□□□□ -1.28
USP39-212ENST00000465514 AKR1C2P52895 323 aa7.03□□□□□ -1.28
USP39-212ENST00000465514 PPP5CP53041 499 aa7.03□□□□□ -1.28
USP39-212ENST00000465514 SUB1P53999 127 aaKnown RBP eCLIP7.03□□□□□ -1.286e-9■■■□□ 18
USP39-212ENST00000465514 PIGPP57054 158 aa7.03□□□□□ -1.28
USP39-212ENST00000465514 RND3P61587 244 aa7.03□□□□□ -1.28
USP39-212ENST00000465514 MLANAQ16655 118 aa7.03□□□□□ -1.28
USP39-212ENST00000465514 SOHLH1Q5JUK2 328 aa7.03□□□□□ -1.28
USP39-212ENST00000465514 Q6ZR54 194 aa7.03□□□□□ -1.28
USP39-212ENST00000465514 TRPT1Q86TN4 253 aaKnown RBP7.03□□□□□ -1.28
USP39-212ENST00000465514 STXBP6Q8NFX7 210 aa7.03□□□□□ -1.28
USP39-212ENST00000465514 METTL26Q96S19 204 aa7.03□□□□□ -1.28
USP39-212ENST00000465514 TP53RKQ96S44 253 aa7.03□□□□□ -1.28
USP39-212ENST00000465514 HRH4Q9H3N8 390 aa7.03□□□□□ -1.28
USP39-212ENST00000465514 MRPL36Q9P0J6 103 aaKnown RBP7.03□□□□□ -1.28
USP39-212ENST00000465514 NACAE9PAV3 2078 aa7.02□□□□□ -1.29
USP39-212ENST00000465514 KNCNA6PVL3 124 aa7.02□□□□□ -1.29
USP39-212ENST00000465514 CORTO00230 105 aa7.02□□□□□ -1.29
USP39-212ENST00000465514 HPGDSO60760 199 aa7.02□□□□□ -1.29
USP39-212ENST00000465514 CLN5O75503 358 aa7.02□□□□□ -1.29
USP39-212ENST00000465514 ZNF688P0C7X2 276 aa7.02□□□□□ -1.29
USP39-212ENST00000465514 P0DMU3 169 aa7.02□□□□□ -1.29
USP39-212ENST00000465514 FAM231AP0DMU4 169 aa7.02□□□□□ -1.29
USP39-212ENST00000465514 FAM231CP0DMU5 169 aa7.02□□□□□ -1.29
USP39-212ENST00000465514 CRYBB3P26998 211 aa7.02□□□□□ -1.29
USP39-212ENST00000465514 HLA-DMBP28068 263 aa7.02□□□□□ -1.29
USP39-212ENST00000465514 P2RY1P47900 373 aa7.02□□□□□ -1.29
USP39-212ENST00000465514 HOXA1P49639 335 aaPredicted RBP7.02□□□□□ -1.29
USP39-212ENST00000465514 RNASE12Q5GAN4 147 aaKnown RBP7.02□□□□□ -1.29
USP39-212ENST00000465514 MORN3Q6PF18 240 aaPredicted RBP7.02□□□□□ -1.29
USP39-212ENST00000465514 TMEM230Q96A57 120 aa7.02□□□□□ -1.29
USP39-212ENST00000465514 ZNF486Q96H40 463 aaPredicted RBP7.02□□□□□ -1.29
USP39-212ENST00000465514 PDCD10Q9BUL8 212 aa7.02□□□□□ -1.29
USP39-212ENST00000465514 FNDC4Q9H6D8 234 aaPredicted RBP7.02□□□□□ -1.29
USP39-212ENST00000465514 VCX3AQ9NNX9 186 aa7.02□□□□□ -1.29
USP39-212ENST00000465514 A0A087WXM4 84 aa7.01□□□□□ -1.29
USP39-212ENST00000465514 C3orf85A0A1B0GTC6 90 aa7.01□□□□□ -1.29
USP39-212ENST00000465514 ZNF705EA8MWA4 302 aaPredicted RBP7.01□□□□□ -1.29
USP39-212ENST00000465514 EPM2AB3EWF7 344 aa7.01□□□□□ -1.29
USP39-212ENST00000465514 ATG12O94817 140 aa7.01□□□□□ -1.29
USP39-212ENST00000465514 IGKV1-17P01599 117 aa7.01□□□□□ -1.29
USP39-212ENST00000465514 SPP1P10451 314 aa7.01□□□□□ -1.29
USP39-212ENST00000465514 MIFP14174 115 aa7.01□□□□□ -1.29
USP39-212ENST00000465514 C4BPBP20851 252 aa7.01□□□□□ -1.29
USP39-212ENST00000465514 OPRK1P41145 380 aa7.01□□□□□ -1.29
USP39-212ENST00000465514 RPL5P46777 297 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms