RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 TSPAN5P62079 268 aa10.53□□□□□ -0.72
MCF2L-220ENST00000464800 ERHP84090 104 aaKnown RBP10.53□□□□□ -0.72
MCF2L-220ENST00000464800 C12orf74Q32Q52 190 aa10.53□□□□□ -0.72
MCF2L-220ENST00000464800 LGALS9BQ3B8N2 356 aa10.53□□□□□ -0.72
MCF2L-220ENST00000464800 ACTL10Q5JWF8 245 aa10.53□□□□□ -0.72
MCF2L-220ENST00000464800 LPCAT3Q6P1A2 487 aa10.53□□□□□ -0.72
MCF2L-220ENST00000464800 H2BFWTQ7Z2G1 175 aa10.53□□□□□ -0.72
MCF2L-220ENST00000464800 TBC1D26Q86UD7 250 aa10.53□□□□□ -0.72
MCF2L-220ENST00000464800 SEC22AQ96IW7 307 aa10.53□□□□□ -0.72
MCF2L-220ENST00000464800 FAM212BQ9NTI7 297 aaPredicted RBP10.53□□□□□ -0.72
MCF2L-220ENST00000464800 RYR1P21817 5038 aa10.53□□□□□ -0.72
MCF2L-220ENST00000464800 A0A1B0GU03 582 aa10.52□□□□□ -0.73
MCF2L-220ENST00000464800 IGKV1-39P01597 117 aa10.52□□□□□ -0.73
MCF2L-220ENST00000464800 IGKV1D-39P04432 117 aa10.52□□□□□ -0.73
MCF2L-220ENST00000464800 LSM3P62310 102 aaKnown RBP10.52□□□□□ -0.73
MCF2L-220ENST00000464800 KCTD21Q4G0X4 260 aa10.52□□□□□ -0.73
MCF2L-220ENST00000464800 CSNK1G2-AS1Q8NCQ2 148 aa10.52□□□□□ -0.73
MCF2L-220ENST00000464800 METTL26Q96S19 204 aa10.52□□□□□ -0.73
MCF2L-220ENST00000464800 DNAH2Q9P225 4427 aa10.51□□□□□ -0.73
MCF2L-220ENST00000464800 NPY1RP25929 384 aa10.51□□□□□ -0.73
MCF2L-220ENST00000464800 P2RY1P47900 373 aa10.51□□□□□ -0.73
MCF2L-220ENST00000464800 HSPE1P61604 102 aaKnown RBP10.51□□□□□ -0.73
MCF2L-220ENST00000464800 GPX8Q8TED1 209 aa10.51□□□□□ -0.73
MCF2L-220ENST00000464800 MRGPRFQ96AM1 343 aa10.51□□□□□ -0.73
MCF2L-220ENST00000464800 NARS2Q96I59 477 aaKnown RBP10.51□□□□□ -0.73
MCF2L-220ENST00000464800 TMEM50AO95807 157 aa10.5□□□□□ -0.73
MCF2L-220ENST00000464800 IFNA10P01566 189 aa10.5□□□□□ -0.73
MCF2L-220ENST00000464800 CRYBB3P26998 211 aa10.5□□□□□ -0.73
MCF2L-220ENST00000464800 SNCAP37840 140 aa10.5□□□□□ -0.73
MCF2L-220ENST00000464800 SPINK9Q5DT21 86 aa10.5□□□□□ -0.73
MCF2L-220ENST00000464800 ZNF575Q86XF7 245 aa10.5□□□□□ -0.73
MCF2L-220ENST00000464800 UBE2DNLQ8IWF7 75 aa10.5□□□□□ -0.73
MCF2L-220ENST00000464800 DCANP1Q8TF63 244 aa10.5□□□□□ -0.73
MCF2L-220ENST00000464800 YIPF6Q96EC8 236 aa10.5□□□□□ -0.73
MCF2L-220ENST00000464800 SCRT1Q9BWW7 348 aa10.5□□□□□ -0.73
MCF2L-220ENST00000464800 KRTAP4-5Q9BYR2 181 aa10.5□□□□□ -0.73
MCF2L-220ENST00000464800 SMIM31A0A1B0GVY4 71 aa10.49□□□□□ -0.73
MCF2L-220ENST00000464800 SCGB2A1O75556 95 aa10.49□□□□□ -0.73
MCF2L-220ENST00000464800 IFNA21P01568 189 aa10.49□□□□□ -0.73
MCF2L-220ENST00000464800 IFNA17P01571 189 aa10.49□□□□□ -0.73
MCF2L-220ENST00000464800 EIF2B2P49770 351 aaKnown RBP10.49□□□□□ -0.73
MCF2L-220ENST00000464800 UCP3P55916 312 aa10.49□□□□□ -0.73
MCF2L-220ENST00000464800 IZUMO4Q1ZYL8 232 aa10.49□□□□□ -0.73
MCF2L-220ENST00000464800 SNX29P2Q8IUI4 249 aa10.49□□□□□ -0.73
MCF2L-220ENST00000464800 SLC35G3Q8N808 338 aa10.49□□□□□ -0.73
MCF2L-220ENST00000464800 C1QTNF4Q9BXJ3 329 aa10.49□□□□□ -0.73
MCF2L-220ENST00000464800 SCPEP1Q9HB40 452 aa10.49□□□□□ -0.73
MCF2L-220ENST00000464800 COMMD3Q9UBI1 195 aa10.49□□□□□ -0.73
MCF2L-220ENST00000464800 IGLV2-18A0A075B6J9 118 aa10.48□□□□□ -0.73
MCF2L-220ENST00000464800 CORTO00230 105 aa10.48□□□□□ -0.73
MCF2L-220ENST00000464800 CD74P04233 296 aa10.48□□□□□ -0.73
MCF2L-220ENST00000464800 PPP5CP53041 499 aa10.48□□□□□ -0.73
MCF2L-220ENST00000464800 NUTF2P61970 127 aaKnown RBP10.48□□□□□ -0.73
MCF2L-220ENST00000464800 DHRS2Q13268 280 aa10.48□□□□□ -0.73
MCF2L-220ENST00000464800 PSMG4Q5JS54 123 aa10.48□□□□□ -0.73
MCF2L-220ENST00000464800 SOHLH1Q5JUK2 328 aa10.48□□□□□ -0.73
MCF2L-220ENST00000464800 RAB40CQ96S21 281 aa10.48□□□□□ -0.73
MCF2L-220ENST00000464800 HELTA6NFD8 242 aa10.47□□□□□ -0.73
MCF2L-220ENST00000464800 CLN5O75503 358 aa10.47□□□□□ -0.73
MCF2L-220ENST00000464800 APOA1P02647 267 aa10.47□□□□□ -0.73
MCF2L-220ENST00000464800 RCVRNP35243 200 aa10.47□□□□□ -0.73
MCF2L-220ENST00000464800 SUB1P53999 127 aaKnown RBP eCLIP10.47□□□□□ -0.73
MCF2L-220ENST00000464800 Q6ZR54 194 aa10.47□□□□□ -0.73
MCF2L-220ENST00000464800 TMEM230Q96A57 120 aa10.47□□□□□ -0.73
MCF2L-220ENST00000464800 PLA2G2EQ9NZK7 142 aa10.47□□□□□ -0.73
MCF2L-220ENST00000464800 XCL2Q9UBD3 114 aa10.47□□□□□ -0.73
MCF2L-220ENST00000464800 PKD1P98161 4303 aa10.46□□□□□ -0.73
MCF2L-220ENST00000464800 DNAH17Q9UFH2 4485 aa10.46□□□□□ -0.73
MCF2L-220ENST00000464800 A0A0B4J293 547 aa10.46□□□□□ -0.73
MCF2L-220ENST00000464800 INS-IGF2F8WCM5 200 aa10.46□□□□□ -0.73
MCF2L-220ENST00000464800 M0QYG6 137 aa10.46□□□□□ -0.73
MCF2L-220ENST00000464800 IGKV1-5P01602 117 aa10.46□□□□□ -0.73
MCF2L-220ENST00000464800 PGAM2P15259 253 aa10.46□□□□□ -0.73
MCF2L-220ENST00000464800 OPRK1P41145 380 aa10.46□□□□□ -0.73
MCF2L-220ENST00000464800 Q6ZRM9 215 aa10.46□□□□□ -0.73
MCF2L-220ENST00000464800 OR4X1Q8NH49 305 aa10.46□□□□□ -0.73
MCF2L-220ENST00000464800 A0A087WXM4 84 aa10.45□□□□□ -0.74
MCF2L-220ENST00000464800 SPART-AS1P0CW21 52 aa10.45□□□□□ -0.74
MCF2L-220ENST00000464800 RNASE2P10153 161 aaKnown RBP10.45□□□□□ -0.74
MCF2L-220ENST00000464800 ELK1P19419 428 aa10.45□□□□□ -0.74
MCF2L-220ENST00000464800 PI3P19957 117 aa10.45□□□□□ -0.74
MCF2L-220ENST00000464800 HOXA1P49639 335 aaPredicted RBP10.45□□□□□ -0.74
MCF2L-220ENST00000464800 RND3P61587 244 aa10.45□□□□□ -0.74
MCF2L-220ENST00000464800 SNRPD3P62318 126 aaKnown RBP10.45□□□□□ -0.74
MCF2L-220ENST00000464800 FAM210BQ96KR6 192 aa10.45□□□□□ -0.74
MCF2L-220ENST00000464800 TP53RKQ96S44 253 aa10.45□□□□□ -0.74
MCF2L-220ENST00000464800 PDCD10Q9BUL8 212 aa10.45□□□□□ -0.74
MCF2L-220ENST00000464800 FNDC4Q9H6D8 234 aaPredicted RBP10.45□□□□□ -0.74
MCF2L-220ENST00000464800 VCX3AQ9NNX9 186 aa10.45□□□□□ -0.74
MCF2L-220ENST00000464800 MRPL36Q9P0J6 103 aaKnown RBP10.45□□□□□ -0.74
MCF2L-220ENST00000464800 NACAE9PAV3 2078 aa10.45□□□□□ -0.74
MCF2L-220ENST00000464800 DNAH11Q96DT5 4516 aa10.45□□□□□ -0.74
MCF2L-220ENST00000464800 TMEM189A5PLL7 270 aa10.44□□□□□ -0.74
MCF2L-220ENST00000464800 HPGDSO60760 199 aa10.44□□□□□ -0.74
MCF2L-220ENST00000464800 IGKV1-17P01599 117 aa10.44□□□□□ -0.74
MCF2L-220ENST00000464800 P0C879 139 aa10.44□□□□□ -0.74
MCF2L-220ENST00000464800 ETV6P41212 452 aa10.44□□□□□ -0.74
MCF2L-220ENST00000464800 AKR1C2P52895 323 aa10.44□□□□□ -0.74
MCF2L-220ENST00000464800 AP2S1P53680 142 aaPredicted RBP10.44□□□□□ -0.74
MCF2L-220ENST00000464800 EMP1P54849 157 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms