RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 PKMYT1Q99640 499 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 MND1Q9BWT6 205 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 RNASE7Q9H1E1 156 aaKnown RBP2.06□□□□□ -2.08
USH2A-203ENST00000463147 BOLA2Q9H3K6 86 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 BIN3Q9NQY0 253 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 C14orf105Q9NVL8 296 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 TP73-AS1Q9UF72 201 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 BAIAP2Q9UQB8 552 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 ANGPT4Q9Y264 503 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 NDUFAF1Q9Y375 327 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 RNF11Q9Y3C5 154 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 ASB4Q9Y574 426 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 ARL5AQ9Y689 179 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 V9GYQ6 96 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 PTPRSQ13332 1948 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 MYH4Q9Y623 1939 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 SHROOM3Q8TF72 1996 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 ROBO3Q96MS0 1386 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 ARHGAP32A7KAX9 2087 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 MRC2Q9UBG0 1479 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 FRMPD1Q5SYB0 1578 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 ZCCHC11Q5TAX3 1644 aaKnown RBP2.06□□□□□ -2.08
USH2A-203ENST00000463147 MYO5AQ9Y4I1 1855 aaKnown RBP2.05□□□□□ -2.08
USH2A-203ENST00000463147 A0A087X0T9 212 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 IGHV3-15A0A0B4J1V0 119 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 A0A0J9YY10 115 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 A0A1B0GX78 115 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 OR4C46A6NHA9 309 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 KNCNA6PVL3 124 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 LINC00587B1AMM8 73 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 CST8O60676 142 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 OR2B3O76000 313 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 CIAO1O76071 339 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 NDUFB2O95178 105 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 DHFRP00374 187 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 IGLV3-19P01714 112 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 IGHV1-69P01742 117 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 SERPINA7P05543 415 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 RBP1P09455 135 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 IFI30P13284 250 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 LPAR6P43657 344 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 GABRA2P47869 451 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 RPL19P84098 196 aaKnown RBP2.05□□□□□ -2.08
USH2A-203ENST00000463147 DEFB107AQ8IZN7 70 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 STX19Q8N4C7 294 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 ANKRD29Q8N6D5 301 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 ZHX1-C8orf76Q96EF9 292 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 TM2D3Q9BRN9 247 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 TCEAL7Q9BRU2 100 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 PDCD10Q9BUL8 212 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 NMNAT1Q9HAN9 279 aaPredicted RBP2.05□□□□□ -2.08
USH2A-203ENST00000463147 RBM7Q9Y580 266 aaKnown RBP2.05□□□□□ -2.08
USH2A-203ENST00000463147 DISP2A7MBM2 1401 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 NFAT5O94916 1531 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 DLC1Q96QB1 1528 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 ADGRB1O14514 1584 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 DEPDC5O75140 1603 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 MAP3K4Q9Y6R4 1608 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 A0A1B0GUL6 1792 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 PPLO60437 1756 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 LAMA4Q16363 1823 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 MYH10P35580 1976 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 SCN9AQ15858 1988 aa2.05□□□□□ -2.08
USH2A-203ENST00000463147 TRAV26-2A0A0B4J265 109 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 PIK3C2AO00443 1686 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 PLXNB1O43157 2135 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 CDS2O95674 445 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 IFNA7P01567 189 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 HLA-DRB1P01911 266 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 C1QBP02746 253 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 S100A8P05109 93 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 C4AP0C0L4 1744 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 C4BP0C0L5 1744 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 SMIM6P0DI80 62 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 COX4I1P13073 169 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 CCL5P13501 91 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 CPS1P31327 1500 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 RPL27AP46776 148 aaKnown RBP2.04□□□□□ -2.08
USH2A-203ENST00000463147 TAS2R30P59541 319 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 NEDD8Q15843 81 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 CLLU1Q5K131 121 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 NEXMIFQ5QGS0 1516 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.04□□□□□ -2.08
USH2A-203ENST00000463147 ZFYVE16Q7Z3T8 1539 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 XRN1Q8IZH2 1706 aaKnown RBP2.04□□□□□ -2.08
USH2A-203ENST00000463147 TCTE3Q8IZS6 198 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 C12orf29Q8N999 325 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 TMEM35BQ8NCS4 154 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 MCFD2Q8NI22 146 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 TVP23CQ96ET8 276 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 DOCK6Q96HP0 2047 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 TSPAN32Q96QS1 320 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 KLF6Q99612 283 aaPredicted RBP2.04□□□□□ -2.08
USH2A-203ENST00000463147 HIGD2AQ9BW72 106 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 KIF13AQ9H1H9 1805 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 MRPL16Q9NX20 251 aaKnown RBP2.04□□□□□ -2.08
USH2A-203ENST00000463147 COA4Q9NYJ1 87 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 COPZ2Q9P299 210 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 OPTCQ9UBM4 332 aa2.04□□□□□ -2.08
USH2A-203ENST00000463147 AK3Q9UIJ7 227 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 238.1 ms