RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 CT45A6P0DMU7 189 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 CT45A5P0DMU8 189 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 CT45A7P0DMV0 189 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 RAB3BP20337 219 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 USF1P22415 310 aaPredicted RBP2.85□□□□□ -1.95
UBA3-204ENST00000461522 GUCA1AP43080 201 aaPredicted RBP2.85□□□□□ -1.95
UBA3-204ENST00000461522 DAPP51397 102 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 AQP4P55087 323 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 FXYD6P3P58550 94 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 PCBD1P61457 104 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 HSPE1P61604 102 aaKnown RBP2.85□□□□□ -1.95
UBA3-204ENST00000461522 SNRPGP62308 76 aaKnown RBP2.85□□□□□ -1.95
UBA3-204ENST00000461522 SLC35A2P78381 396 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 TFF3Q07654 80 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 OR8B8Q15620 311 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 IGFBP7Q16270 282 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 ACOT6Q3I5F7 207 aaPredicted RBP2.85□□□□□ -1.95
UBA3-204ENST00000461522 CT45A1Q5HYN5 189 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 CLLU1Q5K131 121 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 TMEM69Q5SWH9 247 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 FAM27BQ5VT28 67 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 SFXN4Q6P4A7 337 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 TEX261Q6UWH6 196 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 TMEM179BQ7Z7N9 219 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 ZGRF1Q86YA3 2104 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 TCTE3Q8IZS6 198 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 OSR2Q8N2R0 312 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 CBR4Q8N4T8 237 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 OR51A2Q8NGJ7 313 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 OR2T4Q8NH00 348 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 PFN4Q8NHR9 129 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 CT45A3Q8NHU0 189 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 CYGBQ8WWM9 190 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 ITLN2Q8WWU7 325 aaPredicted RBP2.85□□□□□ -1.95
UBA3-204ENST00000461522 IL1F10Q8WWZ1 152 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 RBPMSQ93062 196 aaKnown RBP2.85□□□□□ -1.95
UBA3-204ENST00000461522 ARL11Q969Q4 196 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 BORCS7Q96B45 105 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 PIK3IP1Q96FE7 263 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 PITX2Q99697 317 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 ZNF649Q9BS31 505 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 FAAP24Q9BTP7 215 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 OR52D1Q9H346 318 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 METTL17Q9H7H0 456 aaPredicted RBP2.85□□□□□ -1.95
UBA3-204ENST00000461522 ZNF230Q9UIE0 474 aaPredicted RBP2.85□□□□□ -1.95
UBA3-204ENST00000461522 SCP2D1Q9UJQ7 156 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 RAB22AQ9UL26 194 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 ZFP30Q9Y2G7 519 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 ORC6Q9Y5N6 252 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 OR51B2Q9Y5P1 312 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 SHANK1Q9Y566 2161 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 PCNX1Q96RV3 2341 aa2.85□□□□□ -1.95
UBA3-204ENST00000461522 MYO7BQ6PIF6 2116 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 MED12Q93074 2177 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 USP9XQ93008 2570 aaPredicted RBP2.84□□□□□ -1.95
UBA3-204ENST00000461522 ADGRG4Q8IZF6 3080 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 COL12A1Q99715 3063 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 IGHV2OR16-5A0A0B4J2B6 119 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 A0A0U1RQV1 116 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 LOC100130705A0A1B0GUX0 176 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 A0A1B0GV50 99 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 RIIAD1A6NNX1 92 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.84□□□□□ -1.95
UBA3-204ENST00000461522 J3KT08 172 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 J3QRK9 145 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 GNG7O60262 68 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 MRPS14O60783 128 aaKnown RBP2.84□□□□□ -1.95
UBA3-204ENST00000461522 RAMP1O60894 148 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 CDRT1O95170 752 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 PTHP01270 115 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 PRB1P04280 392 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 MRPL3P09001 348 aaKnown RBP2.84□□□□□ -1.95
UBA3-204ENST00000461522 PSMB9P28065 219 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 S100A2P29034 98 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 SAA4P35542 130 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 GLRXP35754 106 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 SUB1P53999 127 aaKnown RBP eCLIP2.84□□□□□ -1.95
UBA3-204ENST00000461522 AVPI1Q5T686 147 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 NXNL2Q5VZ03 156 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 C12orf73Q69YU5 71 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 STAC2Q6ZMT1 411 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 PRSS48Q7RTY5 328 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 MRPL55Q7Z7F7 128 aaKnown RBP2.84□□□□□ -1.95
UBA3-204ENST00000461522 ZNF433Q8N7K0 673 aaPredicted RBP2.84□□□□□ -1.95
UBA3-204ENST00000461522 PIFOQ8TCI5 191 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 ORAOV1Q8WV07 137 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 DEDD2Q8WXF8 326 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 DCUN1D4Q92564 292 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 ARPC1AQ92747 370 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 SEC22AQ96IW7 307 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 HYLS1Q96M11 299 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 ERMAPQ96PL5 475 aaPredicted RBP2.84□□□□□ -1.95
UBA3-204ENST00000461522 SULT4A1Q9BR01 284 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 GINS4Q9BRT9 223 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 PAXXQ9BUH6 204 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 PBDC1Q9BVG4 233 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 TSSK6Q9BXA6 273 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 VSIRQ9H7M9 311 aa2.84□□□□□ -1.95
UBA3-204ENST00000461522 LYRM2Q9NU23 88 aaPredicted RBP2.84□□□□□ -1.95
UBA3-204ENST00000461522 TMEM38BQ9NVV0 291 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms