RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 ULBP3Q9BZM4 244 aa1.75□□□□□ -2.13
CLK1-206ENST00000461326 MS4A6AQ9H2W1 248 aa1.75□□□□□ -2.13
CLK1-206ENST00000461326 UCK1Q9HA47 277 aa1.75□□□□□ -2.13
CLK1-206ENST00000461326 TAS2R9Q9NYW1 312 aa1.75□□□□□ -2.13
CLK1-206ENST00000461326 V9GYY5 206 aaPredicted RBP1.75□□□□□ -2.13
CLK1-206ENST00000461326 KNL1Q8NG31 2342 aa1.75□□□□□ -2.13
CLK1-206ENST00000461326 UNC13CQ8NB66 2214 aa1.75□□□□□ -2.13
CLK1-206ENST00000461326 BSNQ9UPA5 3926 aa1.75□□□□□ -2.13
CLK1-206ENST00000461326 SNRNP200O75643 2136 aaKnown RBP1.75□□□□□ -2.13
CLK1-206ENST00000461326 USP24Q9UPU5 2620 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 PRRC2CQ9Y520 2896 aaKnown RBP1.74□□□□□ -2.13
CLK1-206ENST00000461326 NCOR2Q9Y618 2525 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 GOLGA4Q13439 2230 aaKnown RBP1.74□□□□□ -2.13
CLK1-206ENST00000461326 SMG1Q96Q15 3661 aaKnown RBP1.74□□□□□ -2.13
CLK1-206ENST00000461326 IGHV3-73A0A0B4J1V6 119 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 EXOC1LA0A1B0GW35 172 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 C5orf49A4QMS7 147 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 FAM159BA6NKW6 160 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 SMIM23A6NLE4 172 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 ZNF878C9JN71 531 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 E7EQ34 232 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 STATHP02808 62 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 C8GP07360 202 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 SLC25A16P16260 332 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 NPPCP23582 126 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 CMPK1P30085 196 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 LINC00313P59037 77 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 MAGOHP61326 146 aaKnown RBP1.74□□□□□ -2.13
CLK1-206ENST00000461326 TBPL1P62380 186 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 HERVK_113P63121 156 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 BTN3A2P78410 334 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 HPCAP84074 193 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 HOXC5Q00444 222 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 DEFA6Q01524 100 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 TMEM267Q0VDI3 215 aaPredicted RBP1.74□□□□□ -2.13
CLK1-206ENST00000461326 TSNQ15631 228 aaKnown RBP1.74□□□□□ -2.13
CLK1-206ENST00000461326 TMEM176BQ3YBM2 270 aaPredicted RBP1.74□□□□□ -2.13
CLK1-206ENST00000461326 ZNF767PQ75MW2 155 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 MSRB3Q8IXL7 192 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 IFT20Q8IY31 132 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 OR11H1Q8NG94 326 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 FNDC9Q8TBE3 224 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 CT55Q8WUE5 264 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 ZCCHC13Q8WW36 166 aaKnown RBP1.74□□□□□ -2.13
CLK1-206ENST00000461326 PRAP1Q96NZ9 151 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 SELENOSQ9BQE4 189 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 DDA1Q9BW61 102 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 C11orf1Q9H5F2 150 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 PARVBQ9HBI1 364 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 NOSIPQ9Y314 301 aaKnown RBP1.74□□□□□ -2.13
CLK1-206ENST00000461326 ANKRD11Q6UB99 2663 aaPredicted RBP1.74□□□□□ -2.13
CLK1-206ENST00000461326 CNOT1A5YKK6 2376 aaKnown RBP1.74□□□□□ -2.13
CLK1-206ENST00000461326 SPTBN2O15020 2390 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 CCDC88CQ9P219 2028 aa1.74□□□□□ -2.13
CLK1-206ENST00000461326 NUP210LQ5VU65 1888 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 IGSF10Q6WRI0 2623 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 MDC1Q14676 2089 aaKnown RBP1.73□□□□□ -2.13
CLK1-206ENST00000461326 UTP20O75691 2785 aaKnown RBP1.73□□□□□ -2.13
CLK1-206ENST00000461326 TENM4Q6N022 2769 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 SCN3AQ9NY46 2000 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 IGF2RP11717 2491 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 TNRC6AQ8NDV7 1962 aaKnown RBP1.73□□□□□ -2.13
CLK1-206ENST00000461326 A0A1B0GX78 115 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 SDHAF1A6NFY7 115 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 ZNF860A6NHJ4 632 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 C17orf51A8MQB3 221 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 H0YGG7 62 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 SLC17A3O00476 420 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 GSTZ1O43708 216 aaPredicted RBP1.73□□□□□ -2.13
CLK1-206ENST00000461326 OR2B3O76000 313 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 SHBGP04278 402 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 PRB1P04280 392 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 CPMP14384 443 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 OR10J1P30954 320 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 SLCO1A2P46721 670 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 GABRA4P48169 554 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 CDC34P49427 236 aaPredicted RBP1.73□□□□□ -2.13
CLK1-206ENST00000461326 SERPINB9P50453 376 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 DCDP81605 110 aaKnown RBP1.73□□□□□ -2.13
CLK1-206ENST00000461326 DEFB109BQ30KR1 87 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 AGTRAPQ6RW13 159 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 RASL11AQ6T310 242 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 SBSNQ6UWP8 590 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 RPS27LQ71UM5 84 aaKnown RBP1.73□□□□□ -2.13
CLK1-206ENST00000461326 ATP5L2Q7Z4Y8 100 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 TBC1D19Q8N5T2 526 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 OR4C16Q8NGL9 310 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 Q8WTZ3 238 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 ARL5BQ96KC2 179 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 DERL2Q9GZP9 239 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 NSRP1Q9H0G5 558 aaKnown RBP1.73□□□□□ -2.13
CLK1-206ENST00000461326 PCBD2Q9H0N5 130 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 POPDC3Q9HBV1 291 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 EMC3Q9P0I2 261 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 HDGFL3Q9Y3E1 203 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 HEATR5BQ9P2D3 2071 aa1.73□□□□□ -2.13
CLK1-206ENST00000461326 MAP1BP46821 2468 aaKnown RBP1.73□□□□□ -2.13
CLK1-206ENST00000461326 CHD6Q8TD26 2715 aa1.72□□□□□ -2.13
CLK1-206ENST00000461326 COL12A1Q99715 3063 aa1.72□□□□□ -2.13
CLK1-206ENST00000461326 C21orf140B9A014 251 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms