RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 SMAD7O15105 426 aaKnown RBP13.52□□□□□ -0.25
YIPF3-205ENST00000460547 ACTL6BO94805 426 aa13.52□□□□□ -0.25
YIPF3-205ENST00000460547 MT-CO2P00403 227 aa13.52□□□□□ -0.25
YIPF3-205ENST00000460547 GCHFRP30047 84 aa13.52□□□□□ -0.25
YIPF3-205ENST00000460547 PRB3Q04118 309 aaPredicted RBP13.52□□□□□ -0.25
YIPF3-205ENST00000460547 LDLRAD2Q5SZI1 272 aa13.52□□□□□ -0.25
YIPF3-205ENST00000460547 PPP1R27Q86WC6 154 aa13.52□□□□□ -0.25
YIPF3-205ENST00000460547 FAM24BQ8N5W8 94 aa13.52□□□□□ -0.25
YIPF3-205ENST00000460547 SEPSECSQ9HD40 501 aaKnown RBP13.52□□□□□ -0.25
YIPF3-205ENST00000460547 METTL1Q9UBP6 276 aaKnown RBP13.52□□□□□ -0.25
YIPF3-205ENST00000460547 MAP1AP78559 2803 aaPredicted RBP13.52□□□□□ -0.25
YIPF3-205ENST00000460547 VENTXO95231 258 aa13.51□□□□□ -0.25
YIPF3-205ENST00000460547 IGHV2-5P01817 119 aa13.51□□□□□ -0.25
YIPF3-205ENST00000460547 OR5G3P0C626 314 aa13.51□□□□□ -0.25
YIPF3-205ENST00000460547 CNTFRP26992 372 aa13.51□□□□□ -0.25
YIPF3-205ENST00000460547 TMEM241Q24JQ0 296 aa13.51□□□□□ -0.25
YIPF3-205ENST00000460547 THAP8Q8NA92 274 aa13.51□□□□□ -0.25
YIPF3-205ENST00000460547 CFHR4Q92496 578 aa13.51□□□□□ -0.25
YIPF3-205ENST00000460547 SRSF8Q9BRL6 282 aaKnown RBP13.51□□□□□ -0.25
YIPF3-205ENST00000460547 CTDSP1Q9GZU7 261 aa13.51□□□□□ -0.25
YIPF3-205ENST00000460547 FNDC4Q9H6D8 234 aaPredicted RBP13.51□□□□□ -0.25
YIPF3-205ENST00000460547 FUT9Q9Y231 359 aa13.51□□□□□ -0.25
YIPF3-205ENST00000460547 TIMM23O14925 209 aa13.5□□□□□ -0.25
YIPF3-205ENST00000460547 CLN5O75503 358 aa13.5□□□□□ -0.25
YIPF3-205ENST00000460547 CTRB1P17538 263 aa13.5□□□□□ -0.25
YIPF3-205ENST00000460547 RND2P52198 227 aa13.5□□□□□ -0.25
YIPF3-205ENST00000460547 RAB5BP61020 215 aa13.5□□□□□ -0.25
YIPF3-205ENST00000460547 TNXAQ16473 311 aa13.5□□□□□ -0.25
YIPF3-205ENST00000460547 CTRB2Q6GPI1 263 aa13.5□□□□□ -0.25
YIPF3-205ENST00000460547 CIARTQ8N365 385 aaPredicted RBP13.5□□□□□ -0.25
YIPF3-205ENST00000460547 RPUSD4Q96CM3 377 aaKnown RBP13.5□□□□□ -0.25
YIPF3-205ENST00000460547 GSX1Q9H4S2 264 aaPredicted RBP13.5□□□□□ -0.25
YIPF3-205ENST00000460547 ZNF469Q96JG9 3925 aaPredicted RBP13.5□□□□□ -0.25
YIPF3-205ENST00000460547 MED13LQ71F56 2210 aa13.5□□□□□ -0.25
YIPF3-205ENST00000460547 OOSP1A8MZH6 123 aa13.5□□□□□ -0.25
YIPF3-205ENST00000460547 C1orf196B1AJZ1 125 aa13.5□□□□□ -0.25
YIPF3-205ENST00000460547 CRYGCP07315 174 aa13.5□□□□□ -0.25
YIPF3-205ENST00000460547 DSCR9P59020 149 aa13.5□□□□□ -0.25
YIPF3-205ENST00000460547 MLANAQ16655 118 aa13.5□□□□□ -0.25
YIPF3-205ENST00000460547 SPATA31B1PQ5VZV4 182 aa13.5□□□□□ -0.25
YIPF3-205ENST00000460547 ETFRF1Q6IPR1 90 aa13.5□□□□□ -0.25
YIPF3-205ENST00000460547 CLEC2AQ6UVW9 174 aa13.5□□□□□ -0.25
YIPF3-205ENST00000460547 RNF2Q99496 336 aa13.5□□□□□ -0.25
YIPF3-205ENST00000460547 TEX22C9J3V5 150 aa13.49□□□□□ -0.25
YIPF3-205ENST00000460547 CORTO00230 105 aa13.49□□□□□ -0.25
YIPF3-205ENST00000460547 TSPAN9O75954 239 aa13.49□□□□□ -0.25
YIPF3-205ENST00000460547 NPPCP23582 126 aa13.49□□□□□ -0.25
YIPF3-205ENST00000460547 ATP5G3P48201 142 aa13.49□□□□□ -0.25
YIPF3-205ENST00000460547 FAM78BQ5VT40 261 aa13.49□□□□□ -0.25
YIPF3-205ENST00000460547 OR1P1Q8NH06 330 aa13.49□□□□□ -0.25
YIPF3-205ENST00000460547 ACY3Q96HD9 319 aa13.49□□□□□ -0.25
YIPF3-205ENST00000460547 SMR3AQ99954 134 aa13.49□□□□□ -0.25
YIPF3-205ENST00000460547 MRPL32Q9BYC8 188 aaKnown RBP13.49□□□□□ -0.25
YIPF3-205ENST00000460547 TEP1Q99973 2627 aaKnown RBP13.49□□□□□ -0.25
YIPF3-205ENST00000460547 PSMB11A5LHX3 300 aa13.48□□□□□ -0.25
YIPF3-205ENST00000460547 RNF223E7ERA6 249 aa13.48□□□□□ -0.25
YIPF3-205ENST00000460547 CLDN34H7C241 214 aa13.48□□□□□ -0.25
YIPF3-205ENST00000460547 SELENOTP62341 195 aa13.48□□□□□ -0.25
YIPF3-205ENST00000460547 RPL23P62829 140 aaKnown RBP13.48□□□□□ -0.25
YIPF3-205ENST00000460547 SSBP2P81877 361 aaPredicted RBP13.48□□□□□ -0.25
YIPF3-205ENST00000460547 ELOBQ15370 118 aa13.48□□□□□ -0.25
YIPF3-205ENST00000460547 ZNF674Q2M3X9 581 aa13.48□□□□□ -0.25
YIPF3-205ENST00000460547 MINOS1Q5TGZ0 78 aa13.48□□□□□ -0.25
YIPF3-205ENST00000460547 CST9LP1Q5W188 147 aa13.48□□□□□ -0.25
YIPF3-205ENST00000460547 C1QL4Q86Z23 238 aa13.48□□□□□ -0.25
YIPF3-205ENST00000460547 OR2T6Q8NHC8 308 aa13.48□□□□□ -0.25
YIPF3-205ENST00000460547 FBXL15Q9H469 300 aa13.48□□□□□ -0.25
YIPF3-205ENST00000460547 TMEM167BQ9NRX6 74 aa13.48□□□□□ -0.25
YIPF3-205ENST00000460547 TECRQ9NZ01 308 aaKnown RBP13.48□□□□□ -0.25
YIPF3-205ENST00000460547 DOK5Q9P104 306 aa13.48□□□□□ -0.25
YIPF3-205ENST00000460547 MINOS1-NBL1R4GNA1 71 aa13.48□□□□□ -0.25
YIPF3-205ENST00000460547 TCRBV4S1A1TA0A5B7 111 aa13.47□□□□□ -0.25
YIPF3-205ENST00000460547 NDUFA3O95167 84 aa13.47□□□□□ -0.25
YIPF3-205ENST00000460547 AREGP15514 252 aa13.47□□□□□ -0.25
YIPF3-205ENST00000460547 TAS2R45P59539 299 aa13.47□□□□□ -0.25
YIPF3-205ENST00000460547 UBE2G2P60604 165 aa13.47□□□□□ -0.25
YIPF3-205ENST00000460547 KLRD1Q13241 179 aa13.47□□□□□ -0.25
YIPF3-205ENST00000460547 CCDC144NLQ6NUI1 221 aa13.47□□□□□ -0.25
YIPF3-205ENST00000460547 PQLC2Q6ZP29 291 aa13.47□□□□□ -0.25
YIPF3-205ENST00000460547 MIR17HGQ75NE6 70 aa13.47□□□□□ -0.25
YIPF3-205ENST00000460547 NPBQ8NG41 125 aa13.47□□□□□ -0.25
YIPF3-205ENST00000460547 SIRPDQ9H106 197 aa13.47□□□□□ -0.25
YIPF3-205ENST00000460547 IGKV1D-37A0A075B6S9 117 aa13.47□□□□□ -0.25
YIPF3-205ENST00000460547 ZFP36P26651 326 aaKnown RBP13.47□□□□□ -0.25
YIPF3-205ENST00000460547 GNB1P62873 340 aa13.47□□□□□ -0.25
YIPF3-205ENST00000460547 ADIRFQ15847 76 aa13.47□□□□□ -0.25
YIPF3-205ENST00000460547 VMO1Q7Z5L0 202 aa13.47□□□□□ -0.25
YIPF3-205ENST00000460547 Q8WTZ3 238 aa13.47□□□□□ -0.25
YIPF3-205ENST00000460547 SRSF12Q8WXF0 261 aaKnown RBP13.47□□□□□ -0.25
YIPF3-205ENST00000460547 FAM168AQ92567 244 aa13.47□□□□□ -0.25
YIPF3-205ENST00000460547 C11orf52Q96A22 123 aa13.47□□□□□ -0.25
YIPF3-205ENST00000460547 BIN3Q9NQY0 253 aa13.47□□□□□ -0.25
YIPF3-205ENST00000460547 F11RQ9Y624 299 aaKnown RBP13.47□□□□□ -0.25
YIPF3-205ENST00000460547 IGHV2-70DA0A0C4DH43 119 aa13.46□□□□□ -0.26
YIPF3-205ENST00000460547 NBR2O15453 112 aa13.46□□□□□ -0.26
YIPF3-205ENST00000460547 MOSP00540 346 aa13.46□□□□□ -0.26
YIPF3-205ENST00000460547 REG1AP05451 166 aa13.46□□□□□ -0.26
YIPF3-205ENST00000460547 HOXB4P17483 251 aaPredicted RBP13.46□□□□□ -0.26
YIPF3-205ENST00000460547 MFAP2P55001 183 aa13.46□□□□□ -0.26
YIPF3-205ENST00000460547 NPIPB3Q92617 1050 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms