RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 FRMPD1Q5SYB0 1578 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 SMARCA4P51532 1647 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 MAST2Q6P0Q8 1798 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 TICRRQ7Z2Z1 1910 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 TRAV27A0A087WT01 109 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 IGKV1-12A0A0C4DH73 117 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 PNMA8CA0A1B0GUJ8 204 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 ODAMA1E959 279 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 PMS2P5A8MQ11 134 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 C1orf196B1AJZ1 125 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 C9JCJ5 164 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 BUB1B-PAK6H3BSN5 160 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 PHOX2AO14813 284 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 CST7O76096 145 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 TNFP01375 233 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 IGKV1D-12P01611 117 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 LGALS3P17931 250 aaKnown RBP2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 S100A2P29034 98 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 TGFBR1P36897 503 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 TMEM258P61165 79 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 GNB2P62879 340 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 CCL20P78556 96 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 ZNF880Q6PDB4 577 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 MORN3Q6PF18 240 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 SSX8Q7RTT4 187 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 SCXQ7RTU7 201 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 LINC00305Q7Z4B0 112 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 SLC25A42Q86VD7 318 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 PDPNQ86YL7 162 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 ZNF440Q8IYI8 595 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 SUMF2Q8NBJ7 301 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 OR8A1Q8NGG7 326 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 TMEM158Q8WZ71 300 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 NEUROG1Q92886 237 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 RNASE6Q93091 150 aaKnown RBP2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 MAL2Q969L2 176 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 ELSPBP1Q96BH3 223 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 TBL1YQ9BQ87 522 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 HDHD3Q9BSH5 251 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 DERL1Q9BUN8 251 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 FGF23Q9GZV9 251 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 KIF13AQ9H1H9 1805 aa2.82□□□□□ -1.96
HMGB3P30-201ENST00000457863 CHD4Q14839 1912 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 CROCCQ5TZA2 2017 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 NUP205Q92621 2012 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 DSCAML1Q8TD84 2053 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 DOCK7Q96N67 2140 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 IGHV3-72A0A0B4J1Y9 119 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 A0A0D9SEW6 157 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 ZNF727A8MUV8 499 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 KRTAP16-1A8MUX0 517 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 EPM2AB3EWF7 344 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 TMEM256-PLSCR3K7ERE1 68 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 SERF1AO75920 110 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 NAPSAO96009 420 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 CD14P08571 375 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 FABP2P12104 132 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 ZNF93P35789 620 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 GNB1P62873 340 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 LAIR2Q6ISS4 152 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 SLC35E3Q7Z769 313 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 TTC9CQ8N5M4 171 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 TEX29Q8N6K0 151 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 Q8N7P7 452 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 OR4K13Q8NH42 304 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 MIEN1Q9BRT3 115 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 ADAT1Q9BUB4 502 aaKnown RBP2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 CHAC1Q9BUX1 264 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 SPANXDQ9BXN6 97 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 DUSP21Q9H596 190 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 ZNF286AQ9HBT8 521 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 MED9Q9NWA0 146 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 KLK5Q9Y337 293 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 ADAMTS12P58397 1594 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 TRPM1Q7Z4N2 1603 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 ALPK3Q96L96 1907 aa2.81□□□□□ -1.96
HMGB3P30-201ENST00000457863 MYH13Q9UKX3 1938 aa2.8□□□□□ -1.96
HMGB3P30-201ENST00000457863 RIMBP3CA6NJZ7 1639 aa2.8□□□□□ -1.96
HMGB3P30-201ENST00000457863 RIMBP3BA6NNM3 1639 aa2.8□□□□□ -1.96
HMGB3P30-201ENST00000457863 RIMBP3Q9UFD9 1639 aa2.8□□□□□ -1.96
HMGB3P30-201ENST00000457863 CCDC88BA6NC98 1476 aa2.8□□□□□ -1.96
HMGB3P30-201ENST00000457863 RGS12O14924 1447 aa2.8□□□□□ -1.96
HMGB3P30-201ENST00000457863 A0A087X002 238 aa2.8□□□□□ -1.96
HMGB3P30-201ENST00000457863 A0A087X0T9 212 aa2.8□□□□□ -1.96
HMGB3P30-201ENST00000457863 TRAV13-1A0A0B4J241 112 aa2.8□□□□□ -1.96
HMGB3P30-201ENST00000457863 IGKV1-9A0A0C4DH69 117 aa2.8□□□□□ -1.96
HMGB3P30-201ENST00000457863 OR2T8A6NH00 312 aa2.8□□□□□ -1.96
HMGB3P30-201ENST00000457863 IFITM10A6NMD0 228 aa2.8□□□□□ -1.96
HMGB3P30-201ENST00000457863 CYSRT1A8MQ03 144 aa2.8□□□□□ -1.96
HMGB3P30-201ENST00000457863 A8MWV9 139 aa2.8□□□□□ -1.96
HMGB3P30-201ENST00000457863 SRRM5B3KS81 715 aa2.8□□□□□ -1.96
HMGB3P30-201ENST00000457863 ZNF324O75467 553 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P30-201ENST00000457863 IGHV3-11P01762 117 aa2.8□□□□□ -1.96
HMGB3P30-201ENST00000457863 CXCL1P09341 107 aa2.8□□□□□ -1.96
HMGB3P30-201ENST00000457863 PATE4P0C8F1 98 aa2.8□□□□□ -1.96
HMGB3P30-201ENST00000457863 ZNF19P17023 458 aa2.8□□□□□ -1.96
HMGB3P30-201ENST00000457863 ZNF32P17041 273 aa2.8□□□□□ -1.96
HMGB3P30-201ENST00000457863 ELK1P19419 428 aa2.8□□□□□ -1.96
HMGB3P30-201ENST00000457863 ZNF136P52737 540 aa2.8□□□□□ -1.96
HMGB3P30-201ENST00000457863 DIO3P55073 304 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms