RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 DMBX1Q8NFW5 382 aa10.74□□□□□ -0.69
SF3B4-202ENST00000457312 TMEM50AO95807 157 aa10.73□□□□□ -0.69
SF3B4-202ENST00000457312 HPRT1P00492 218 aa10.73□□□□□ -0.69
SF3B4-202ENST00000457312 RPL37AP61513 92 aaKnown RBP10.73□□□□□ -0.69
SF3B4-202ENST00000457312 FAM78BQ5VT40 261 aa10.73□□□□□ -0.69
SF3B4-202ENST00000457312 TMPRSS11AQ6ZMR5 421 aa10.73□□□□□ -0.69
SF3B4-202ENST00000457312 OR10J6PQ8NGY7 276 aa10.73□□□□□ -0.69
SF3B4-202ENST00000457312 MRPS18AQ9NVS2 196 aaKnown RBP10.73□□□□□ -0.69
SF3B4-202ENST00000457312 OR51B2Q9Y5P1 312 aa10.73□□□□□ -0.69
SF3B4-202ENST00000457312 F6UB75 175 aa10.72□□□□□ -0.69
SF3B4-202ENST00000457312 PAX9P55771 341 aa10.72□□□□□ -0.69
SF3B4-202ENST00000457312 Q6ZS49 121 aa10.72□□□□□ -0.69
SF3B4-202ENST00000457312 ABHD1Q96SE0 405 aa10.72□□□□□ -0.69
SF3B4-202ENST00000457312 CHAC1Q9BUX1 264 aa10.72□□□□□ -0.69
SF3B4-202ENST00000457312 CRCT1Q9UGL9 99 aa10.72□□□□□ -0.69
SF3B4-202ENST00000457312 ARL2BPQ9Y2Y0 163 aa10.72□□□□□ -0.69
SF3B4-202ENST00000457312 NSG2Q9Y328 171 aa10.72□□□□□ -0.69
SF3B4-202ENST00000457312 PNMA8CA0A1B0GUJ8 204 aa10.71□□□□□ -0.69
SF3B4-202ENST00000457312 MFNGO00587 321 aa10.71□□□□□ -0.69
SF3B4-202ENST00000457312 P2RY14Q15391 338 aa10.71□□□□□ -0.69
SF3B4-202ENST00000457312 AMTNQ6UX39 209 aa10.71□□□□□ -0.69
SF3B4-202ENST00000457312 TMED4Q7Z7H5 227 aa10.71□□□□□ -0.69
SF3B4-202ENST00000457312 OR56B1Q8NGI3 324 aa10.71□□□□□ -0.69
SF3B4-202ENST00000457312 CIRBP-AS1Q8TBR5 109 aa10.71□□□□□ -0.69
SF3B4-202ENST00000457312 TMEM56Q96MV1 263 aa10.71□□□□□ -0.69
SF3B4-202ENST00000457312 LINC00052Q96N35 136 aa10.71□□□□□ -0.69
SF3B4-202ENST00000457312 LINC00467Q9BRT7 94 aa10.71□□□□□ -0.69
SF3B4-202ENST00000457312 TRAV9-2A0A087WT02 112 aa10.7□□□□□ -0.7
SF3B4-202ENST00000457312 A0A0U1RQV1 116 aa10.7□□□□□ -0.7
SF3B4-202ENST00000457312 SULT1C2O00338 296 aa10.7□□□□□ -0.7
SF3B4-202ENST00000457312 INSP01308 110 aa10.7□□□□□ -0.7
SF3B4-202ENST00000457312 IGLV2-8P01709 118 aa10.7□□□□□ -0.7
SF3B4-202ENST00000457312 SPATA31B1PQ5VZV4 182 aa10.7□□□□□ -0.7
SF3B4-202ENST00000457312 SIGLEC15Q6ZMC9 328 aa10.7□□□□□ -0.7
SF3B4-202ENST00000457312 VSIG2Q96IQ7 327 aa10.7□□□□□ -0.7
SF3B4-202ENST00000457312 CENPOQ9BU64 300 aa10.7□□□□□ -0.7
SF3B4-202ENST00000457312 FGF20Q9NP95 211 aaPredicted RBP10.7□□□□□ -0.7
SF3B4-202ENST00000457312 TIMM8BQ9Y5J9 83 aaPredicted RBP10.7□□□□□ -0.7
SF3B4-202ENST00000457312 LY96Q9Y6Y9 160 aa10.7□□□□□ -0.7
SF3B4-202ENST00000457312 A8MTW9 85 aa10.69□□□□□ -0.7
SF3B4-202ENST00000457312 CRXO43186 299 aaPredicted RBP10.69□□□□□ -0.7
SF3B4-202ENST00000457312 PSCAO43653 123 aa10.69□□□□□ -0.7
SF3B4-202ENST00000457312 HNRNPCP07910 306 aaKnown RBP eCLIP10.69□□□□□ -0.7
SF3B4-202ENST00000457312 MAPK3P27361 379 aaPredicted RBP10.69□□□□□ -0.7
SF3B4-202ENST00000457312 FLOT2Q14254 428 aa10.69□□□□□ -0.7
SF3B4-202ENST00000457312 LINC00612Q8N6U2 182 aa10.69□□□□□ -0.7
SF3B4-202ENST00000457312 PLEKHA2Q9HB19 425 aa10.69□□□□□ -0.7
SF3B4-202ENST00000457312 NOP10Q9NPE3 64 aaKnown RBP10.69□□□□□ -0.7
SF3B4-202ENST00000457312 A0A0J9YX75 114 aa10.68□□□□□ -0.7
SF3B4-202ENST00000457312 ST3GAL4Q11206 333 aa10.68□□□□□ -0.7
SF3B4-202ENST00000457312 INSL4Q14641 139 aa10.68□□□□□ -0.7
SF3B4-202ENST00000457312 TMEM230Q96A57 120 aa10.68□□□□□ -0.7
SF3B4-202ENST00000457312 WDR12Q9GZL7 423 aaKnown RBP10.68□□□□□ -0.7
SF3B4-202ENST00000457312 COMMD9Q9P000 198 aa10.68□□□□□ -0.7
SF3B4-202ENST00000457312 MRPL36Q9P0J6 103 aaKnown RBP10.68□□□□□ -0.7
SF3B4-202ENST00000457312 CLEC2DQ9UHP7 191 aa10.68□□□□□ -0.7
SF3B4-202ENST00000457312 B2MP61769 119 aa10.67□□□□□ -0.7
SF3B4-202ENST00000457312 Q6ZRU5 148 aa10.67□□□□□ -0.7
SF3B4-202ENST00000457312 BAP18Q8IXM2 172 aa10.67□□□□□ -0.7
SF3B4-202ENST00000457312 ZNF485Q8NCK3 441 aa10.67□□□□□ -0.7
SF3B4-202ENST00000457312 RAB3CQ96E17 227 aa10.67□□□□□ -0.7
SF3B4-202ENST00000457312 C16orf74Q96GX8 76 aa10.67□□□□□ -0.7
SF3B4-202ENST00000457312 K7EP13 123 aa10.66□□□□□ -0.7
SF3B4-202ENST00000457312 M0R2Z0 102 aa10.66□□□□□ -0.7
SF3B4-202ENST00000457312 IGKV1-17P01599 117 aa10.66□□□□□ -0.7
SF3B4-202ENST00000457312 ELK1P19419 428 aa10.66□□□□□ -0.7
SF3B4-202ENST00000457312 PSMB3P49720 205 aa10.66□□□□□ -0.7
SF3B4-202ENST00000457312 ERVK-16P61578 105 aa10.66□□□□□ -0.7
SF3B4-202ENST00000457312 LINC01620Q4KN68 170 aa10.66□□□□□ -0.7
SF3B4-202ENST00000457312 EBLN2Q6P2I7 272 aa10.66□□□□□ -0.7
SF3B4-202ENST00000457312 AMIGO2Q86SJ2 522 aa10.66□□□□□ -0.7
SF3B4-202ENST00000457312 LRTM2Q8N967 370 aa10.66□□□□□ -0.7
SF3B4-202ENST00000457312 COQ8AQ8NI60 647 aa10.66□□□□□ -0.7
SF3B4-202ENST00000457312 PHYHIPQ92561 330 aa10.66□□□□□ -0.7
SF3B4-202ENST00000457312 DNAJC4Q9NNZ3 241 aa10.66□□□□□ -0.7
SF3B4-202ENST00000457312 CCL28Q9NRJ3 127 aa10.66□□□□□ -0.7
SF3B4-202ENST00000457312 SOCS3O14543 225 aa10.65□□□□□ -0.7
SF3B4-202ENST00000457312 CLN5O75503 358 aa10.65□□□□□ -0.7
SF3B4-202ENST00000457312 SPINK13Q1W4C9 94 aa10.65□□□□□ -0.7
SF3B4-202ENST00000457312 CMTM1Q8IZ96 169 aa10.65□□□□□ -0.7
SF3B4-202ENST00000457312 OAZ3Q9UMX2 235 aa10.65□□□□□ -0.7
SF3B4-202ENST00000457312 CATR1Q13166 79 aa10.64□□□□□ -0.71
SF3B4-202ENST00000457312 MSMO1Q15800 293 aa10.64□□□□□ -0.71
SF3B4-202ENST00000457312 TIGITQ495A1 244 aa10.64□□□□□ -0.71
SF3B4-202ENST00000457312 OR51H1Q8NH63 302 aa10.64□□□□□ -0.71
SF3B4-202ENST00000457312 RHOXF1Q8NHV9 184 aa10.64□□□□□ -0.71
SF3B4-202ENST00000457312 RNASE8Q8TDE3 154 aaKnown RBP10.64□□□□□ -0.71
SF3B4-202ENST00000457312 PRNDQ9UKY0 176 aa10.64□□□□□ -0.71
SF3B4-202ENST00000457312 A0A075B6Q4 140 aa10.63□□□□□ -0.71
SF3B4-202ENST00000457312 SLC17A2O00624 439 aa10.63□□□□□ -0.71
SF3B4-202ENST00000457312 BUB3O43684 328 aa10.63□□□□□ -0.71
SF3B4-202ENST00000457312 ADAP1O75689 374 aa10.63□□□□□ -0.71
SF3B4-202ENST00000457312 CTXN2P0C2S0 81 aa10.63□□□□□ -0.71
SF3B4-202ENST00000457312 WFDC2Q14508 124 aa10.63□□□□□ -0.71
SF3B4-202ENST00000457312 TPRA1Q86W33 373 aa10.63□□□□□ -0.71
SF3B4-202ENST00000457312 WFDC10BQ8IUB3 73 aa10.63□□□□□ -0.71
SF3B4-202ENST00000457312 LGALS14Q8TCE9 139 aa10.63□□□□□ -0.71
SF3B4-202ENST00000457312 SECTM1Q8WVN6 248 aa10.63□□□□□ -0.71
SF3B4-202ENST00000457312 APH1BQ8WW43 257 aa10.63□□□□□ -0.71
SF3B4-202ENST00000457312 GPR146Q96CH1 333 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms