RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 PRDX2P32119 198 aa8.4□□□□□ -1.07
CLIP4-208ENST00000456385 MRPL49Q13405 166 aaKnown RBP8.4□□□□□ -1.07
CLIP4-208ENST00000456385 RAB30Q15771 203 aa8.4□□□□□ -1.07
CLIP4-208ENST00000456385 C12orf54Q6X4T0 127 aa8.4□□□□□ -1.07
CLIP4-208ENST00000456385 OR4S2Q8NH73 311 aa8.4□□□□□ -1.07
CLIP4-208ENST00000456385 B4GALT7Q9UBV7 327 aa8.4□□□□□ -1.07
CLIP4-208ENST00000456385 CFAP47Q6ZTR5 3102 aa8.39□□□□□ -1.07
CLIP4-208ENST00000456385 A0A1B0GXF2 115 aa8.39□□□□□ -1.07
CLIP4-208ENST00000456385 J3QR06 171 aa8.39□□□□□ -1.07
CLIP4-208ENST00000456385 K7ERU9 68 aa8.39□□□□□ -1.07
CLIP4-208ENST00000456385 SSBP2P81877 361 aaPredicted RBP8.39□□□□□ -1.07
CLIP4-208ENST00000456385 SMIM21Q3B7S5 101 aa8.39□□□□□ -1.07
CLIP4-208ENST00000456385 HES3Q5TGS1 186 aa8.39□□□□□ -1.07
CLIP4-208ENST00000456385 FAM231DQ6ZW35 169 aa8.39□□□□□ -1.07
CLIP4-208ENST00000456385 SAA2P0DJI9 122 aaPredicted RBP8.38□□□□□ -1.07
CLIP4-208ENST00000456385 FABP6P51161 128 aa8.38□□□□□ -1.07
CLIP4-208ENST00000456385 ZNF137PP52743 207 aa8.38□□□□□ -1.07
CLIP4-208ENST00000456385 FAM71F2Q6NXP2 309 aa8.38□□□□□ -1.07
CLIP4-208ENST00000456385 LINC00322Q6ZN03 302 aaPredicted RBP8.38□□□□□ -1.07
CLIP4-208ENST00000456385 LINC00696Q6ZRV3 163 aa8.38□□□□□ -1.07
CLIP4-208ENST00000456385 LHFPL4Q7Z7J7 247 aa8.38□□□□□ -1.07
CLIP4-208ENST00000456385 ZNF329Q86UD4 541 aa8.38□□□□□ -1.07
CLIP4-208ENST00000456385 ZNRF1Q8ND25 227 aa8.38□□□□□ -1.07
CLIP4-208ENST00000456385 CXXC4Q9H2H0 198 aa8.38□□□□□ -1.07
CLIP4-208ENST00000456385 JPT1Q9UK76 154 aa8.38□□□□□ -1.07
CLIP4-208ENST00000456385 IGKV1D-17A0A075B6S4 117 aa8.38□□□□□ -1.07
CLIP4-208ENST00000456385 IGHV3OR15-7A0A075B7D8 119 aa8.38□□□□□ -1.07
CLIP4-208ENST00000456385 HSBP1L1C9JCN9 74 aa8.38□□□□□ -1.07
CLIP4-208ENST00000456385 PEX7O00628 323 aa8.38□□□□□ -1.07
CLIP4-208ENST00000456385 CD5LO43866 347 aa8.38□□□□□ -1.07
CLIP4-208ENST00000456385 AGFG2O95081 481 aa8.38□□□□□ -1.07
CLIP4-208ENST00000456385 IGHV3-48P01763 117 aa8.38□□□□□ -1.07
CLIP4-208ENST00000456385 CT45A1Q5HYN5 189 aa8.38□□□□□ -1.07
CLIP4-208ENST00000456385 WFDC8Q8IUA0 241 aa8.38□□□□□ -1.07
CLIP4-208ENST00000456385 OR10W1Q8NGF6 305 aa8.38□□□□□ -1.07
CLIP4-208ENST00000456385 CT45A3Q8NHU0 189 aa8.38□□□□□ -1.07
CLIP4-208ENST00000456385 CT55Q8WUE5 264 aa8.38□□□□□ -1.07
CLIP4-208ENST00000456385 LRRC29Q8WV35 223 aa8.38□□□□□ -1.07
CLIP4-208ENST00000456385 C7orf69Q9H7B7 122 aa8.38□□□□□ -1.07
CLIP4-208ENST00000456385 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.37□□□□□ -1.07
CLIP4-208ENST00000456385 C7orf71A4D174 169 aa8.37□□□□□ -1.07
CLIP4-208ENST00000456385 PSMB11A5LHX3 300 aa8.37□□□□□ -1.07
CLIP4-208ENST00000456385 SRRM4A7MD48 611 aaKnown RBP8.37□□□□□ -1.07
CLIP4-208ENST00000456385 PPIAL4DF5H284 164 aa8.37□□□□□ -1.07
CLIP4-208ENST00000456385 K7ESF4 209 aa8.37□□□□□ -1.07
CLIP4-208ENST00000456385 PLAUP00749 431 aa8.37□□□□□ -1.07
CLIP4-208ENST00000456385 IGKV1-16P04430 117 aa8.37□□□□□ -1.07
CLIP4-208ENST00000456385 HBBP68871 147 aa8.37□□□□□ -1.07
CLIP4-208ENST00000456385 GTSF1Q8WW33 167 aa8.37□□□□□ -1.07
CLIP4-208ENST00000456385 FNDC10F2Z333 226 aa8.37□□□□□ -1.07
CLIP4-208ENST00000456385 NTN3O00634 580 aaPredicted RBP8.37□□□□□ -1.07
CLIP4-208ENST00000456385 TIMM8AO60220 97 aaPredicted RBP8.37□□□□□ -1.07
CLIP4-208ENST00000456385 IGLC1P0CG04 106 aa8.37□□□□□ -1.07
CLIP4-208ENST00000456385 HIST1H1EP10412 219 aaKnown RBP8.37□□□□□ -1.07
CLIP4-208ENST00000456385 CD46P15529 392 aa8.37□□□□□ -1.07
CLIP4-208ENST00000456385 IGHV1-2P23083 117 aa8.37□□□□□ -1.07
CLIP4-208ENST00000456385 RTL8BQ17RB0 113 aa8.37□□□□□ -1.07
CLIP4-208ENST00000456385 PGLYRP4Q96LB8 373 aa8.37□□□□□ -1.07
CLIP4-208ENST00000456385 TMEM191AQ9H0A3 160 aa8.37□□□□□ -1.07
CLIP4-208ENST00000456385 FNDC4Q9H6D8 234 aaPredicted RBP8.37□□□□□ -1.07
CLIP4-208ENST00000456385 C1RLQ9NZP8 487 aa8.37□□□□□ -1.07
CLIP4-208ENST00000456385 PEF1Q9UBV8 284 aaKnown RBP8.37□□□□□ -1.07
CLIP4-208ENST00000456385 RPH3ALQ9UNE2 315 aa8.37□□□□□ -1.07
CLIP4-208ENST00000456385 J3QW42 95 aa8.36□□□□□ -1.07
CLIP4-208ENST00000456385 GPR183P32249 361 aa8.36□□□□□ -1.07
CLIP4-208ENST00000456385 HIST1H1AQ02539 215 aaPredicted RBP8.36□□□□□ -1.07
CLIP4-208ENST00000456385 C2orf91Q6ZV80 131 aa8.36□□□□□ -1.07
CLIP4-208ENST00000456385 NAA38Q9BRA0 125 aaKnown RBP8.36□□□□□ -1.07
CLIP4-208ENST00000456385 PAXXQ9BUH6 204 aa8.36□□□□□ -1.07
CLIP4-208ENST00000456385 C19orf24Q9BVV8 132 aa8.36□□□□□ -1.07
CLIP4-208ENST00000456385 DEFB127Q9H1M4 99 aa8.36□□□□□ -1.07
CLIP4-208ENST00000456385 ZNRD1Q9P1U0 126 aa8.36□□□□□ -1.07
CLIP4-208ENST00000456385 TEX50A0A1B0GTY4 177 aa8.36□□□□□ -1.07
CLIP4-208ENST00000456385 FAM231BA6NCW3 169 aa8.36□□□□□ -1.07
CLIP4-208ENST00000456385 GAGE10A6NGK3 116 aa8.36□□□□□ -1.07
CLIP4-208ENST00000456385 CFIP05156 583 aa8.36□□□□□ -1.07
CLIP4-208ENST00000456385 CSN3P07498 182 aa8.36□□□□□ -1.07
CLIP4-208ENST00000456385 KIR2DS2P43631 304 aa8.36□□□□□ -1.07
CLIP4-208ENST00000456385 UQCRFS1P47985 274 aa8.36□□□□□ -1.07
CLIP4-208ENST00000456385 REG1BP48304 166 aa8.36□□□□□ -1.07
CLIP4-208ENST00000456385 PRCDQ00LT1 54 aa8.36□□□□□ -1.07
CLIP4-208ENST00000456385 ABHD17BQ5VST6 288 aa8.36□□□□□ -1.07
CLIP4-208ENST00000456385 ATP5L2Q7Z4Y8 100 aa8.36□□□□□ -1.07
CLIP4-208ENST00000456385 CHCHD1Q96BP2 118 aaKnown RBP8.36□□□□□ -1.07
CLIP4-208ENST00000456385 CHRDL1Q9BU40 450 aa8.36□□□□□ -1.07
CLIP4-208ENST00000456385 MAP1LC3CQ9BXW4 147 aa8.36□□□□□ -1.07
CLIP4-208ENST00000456385 CALYQ9NYX4 217 aa8.36□□□□□ -1.07
CLIP4-208ENST00000456385 MRPS17Q9Y2R5 130 aaKnown RBP8.36□□□□□ -1.07
CLIP4-208ENST00000456385 F2RL2O00254 374 aa8.35□□□□□ -1.07
CLIP4-208ENST00000456385 PATE2Q6UY27 113 aa8.35□□□□□ -1.07
CLIP4-208ENST00000456385 BLNKQ8WV28 456 aa8.35□□□□□ -1.07
CLIP4-208ENST00000456385 ARFGEF3Q5TH69 2177 aa8.35□□□□□ -1.07
CLIP4-208ENST00000456385 PATE3B3GLJ2 98 aa8.35□□□□□ -1.07
CLIP4-208ENST00000456385 HLA-DRB1P01911 266 aa8.35□□□□□ -1.07
CLIP4-208ENST00000456385 APOA2P02652 100 aa8.35□□□□□ -1.07
CLIP4-208ENST00000456385 RNASE2P10153 161 aaKnown RBP8.35□□□□□ -1.07
CLIP4-208ENST00000456385 IGFBP4P22692 258 aa8.35□□□□□ -1.07
CLIP4-208ENST00000456385 CXCL12P48061 93 aa8.35□□□□□ -1.07
CLIP4-208ENST00000456385 TCTAP57738 103 aa8.35□□□□□ -1.07
CLIP4-208ENST00000456385 CD69Q07108 199 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms