RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 TXNL4BQ9NX01 149 aaKnown RBP16.55■□□□□ 0.24
PTPRA-208ENST00000455631 EBAG9O00559 213 aa16.54■□□□□ 0.24
PTPRA-208ENST00000455631 HTN3P15516 51 aa16.54■□□□□ 0.24
PTPRA-208ENST00000455631 FGF9P31371 208 aaPredicted RBP16.54■□□□□ 0.24
PTPRA-208ENST00000455631 RFX2P48378 723 aa16.54■□□□□ 0.24
PTPRA-208ENST00000455631 EIF2B2P49770 351 aaKnown RBP16.54■□□□□ 0.24
PTPRA-208ENST00000455631 KCTD21Q4G0X4 260 aa16.54■□□□□ 0.24
PTPRA-208ENST00000455631 TMEM189A5PLL7 270 aa16.53■□□□□ 0.24
PTPRA-208ENST00000455631 GPR31O00270 319 aa16.53■□□□□ 0.24
PTPRA-208ENST00000455631 DHRS11Q6UWP2 260 aa16.53■□□□□ 0.24
PTPRA-208ENST00000455631 FXYD6Q9H0Q3 95 aa16.53■□□□□ 0.24
PTPRA-208ENST00000455631 A0A0A6YYH2 397 aa16.52■□□□□ 0.24
PTPRA-208ENST00000455631 A6NJ64 397 aa16.52■□□□□ 0.24
PTPRA-208ENST00000455631 HSPE1P61604 102 aaKnown RBP16.52■□□□□ 0.24
PTPRA-208ENST00000455631 PHLDA2Q53GA4 152 aa16.52■□□□□ 0.24
PTPRA-208ENST00000455631 TMEM230Q96A57 120 aa16.52■□□□□ 0.24
PTPRA-208ENST00000455631 SEC22AQ96IW7 307 aa16.52■□□□□ 0.24
PTPRA-208ENST00000455631 LRP1BQ9NZR2 4599 aa16.51■□□□□ 0.23
PTPRA-208ENST00000455631 PMP2P02689 132 aa16.51■□□□□ 0.23
PTPRA-208ENST00000455631 SNCAP37840 140 aa16.51■□□□□ 0.23
PTPRA-208ENST00000455631 ZNF705AQ6ZN79 300 aaPredicted RBP16.51■□□□□ 0.23
PTPRA-208ENST00000455631 NEU1Q99519 415 aa16.51■□□□□ 0.23
PTPRA-208ENST00000455631 NIPSNAP3BQ9BS92 247 aa16.51■□□□□ 0.23
PTPRA-208ENST00000455631 SCRT2Q9NQ03 307 aa16.51■□□□□ 0.23
PTPRA-208ENST00000455631 DIABLOQ9NR28 239 aa16.51■□□□□ 0.23
PTPRA-208ENST00000455631 IGHV3OR16-12A0A075B7B8 117 aa16.5■□□□□ 0.23
PTPRA-208ENST00000455631 SCGB2A1O75556 95 aa16.5■□□□□ 0.23
PTPRA-208ENST00000455631 SCAND1P57086 179 aa16.5■□□□□ 0.23
PTPRA-208ENST00000455631 FAM222AQ5U5X8 452 aa16.5■□□□□ 0.23
PTPRA-208ENST00000455631 MRGPRFQ96AM1 343 aa16.5■□□□□ 0.23
PTPRA-208ENST00000455631 RNF167Q9H6Y7 350 aa16.5■□□□□ 0.23
PTPRA-208ENST00000455631 MRPL36Q9P0J6 103 aaKnown RBP16.5■□□□□ 0.23
PTPRA-208ENST00000455631 DKK2Q9UBU2 259 aa16.5■□□□□ 0.23
PTPRA-208ENST00000455631 TEX48A0A1B0GUV7 120 aa16.49■□□□□ 0.23
PTPRA-208ENST00000455631 ZNF705FA8MVS1 300 aaPredicted RBP16.49■□□□□ 0.23
PTPRA-208ENST00000455631 H3BMM0 161 aa16.49■□□□□ 0.23
PTPRA-208ENST00000455631 CORTO00230 105 aa16.49■□□□□ 0.23
PTPRA-208ENST00000455631 CLN5O75503 358 aa16.49■□□□□ 0.23
PTPRA-208ENST00000455631 ZNF705DP0CH99 300 aaPredicted RBP16.49■□□□□ 0.23
PTPRA-208ENST00000455631 ZNF705BP0CI00 300 aaPredicted RBP16.49■□□□□ 0.23
PTPRA-208ENST00000455631 SNRPD3P62318 126 aaKnown RBP16.49■□□□□ 0.23
PTPRA-208ENST00000455631 MXD1Q05195 221 aa16.49■□□□□ 0.23
PTPRA-208ENST00000455631 IDNKQ5T6J7 187 aa16.49■□□□□ 0.23
PTPRA-208ENST00000455631 OR5H2Q8NGV7 314 aa16.49■□□□□ 0.23
PTPRA-208ENST00000455631 BLOC1S6Q9UL45 172 aa16.49■□□□□ 0.23
PTPRA-208ENST00000455631 TMED3Q9Y3Q3 217 aa16.49■□□□□ 0.23
PTPRA-208ENST00000455631 SMIM9A6NGZ8 99 aa16.48■□□□□ 0.23
PTPRA-208ENST00000455631 IGKV1-39P01597 117 aa16.48■□□□□ 0.23
PTPRA-208ENST00000455631 IGKV1D-39P04432 117 aa16.48■□□□□ 0.23
PTPRA-208ENST00000455631 S100GP29377 79 aa16.48■□□□□ 0.23
PTPRA-208ENST00000455631 SDC2P34741 201 aa16.48■□□□□ 0.23
PTPRA-208ENST00000455631 OPRK1P41145 380 aa16.48■□□□□ 0.23
PTPRA-208ENST00000455631 TMEM88Q6PEY1 159 aa16.48■□□□□ 0.23
PTPRA-208ENST00000455631 TBC1D26Q86UD7 250 aa16.48■□□□□ 0.23
PTPRA-208ENST00000455631 SLC35G3Q8N808 338 aa16.48■□□□□ 0.23
PTPRA-208ENST00000455631 FAM212BQ9NTI7 297 aaPredicted RBP16.48■□□□□ 0.23
PTPRA-208ENST00000455631 RFNGQ9Y644 331 aa16.48■□□□□ 0.23
PTPRA-208ENST00000455631 FAM90A26D6RGX4 464 aa16.47■□□□□ 0.23
PTPRA-208ENST00000455631 CLEC2LP0C7M8 214 aa16.47■□□□□ 0.23
PTPRA-208ENST00000455631 AP2S1P53680 142 aaPredicted RBP16.47■□□□□ 0.23
PTPRA-208ENST00000455631 IZUMO4Q1ZYL8 232 aa16.47■□□□□ 0.23
PTPRA-208ENST00000455631 GLMPQ8WWB7 406 aa16.47■□□□□ 0.23
PTPRA-208ENST00000455631 FXYD7P58549 80 aa16.46■□□□□ 0.23
PTPRA-208ENST00000455631 TAS2R46P59540 309 aa16.46■□□□□ 0.23
PTPRA-208ENST00000455631 TIGITQ495A1 244 aa16.46■□□□□ 0.23
PTPRA-208ENST00000455631 C16orf54Q6UWD8 224 aa16.46■□□□□ 0.23
PTPRA-208ENST00000455631 OR6F1Q8NGZ6 308 aa16.46■□□□□ 0.23
PTPRA-208ENST00000455631 OR4X1Q8NH49 305 aa16.46■□□□□ 0.23
PTPRA-208ENST00000455631 FNDC4Q9H6D8 234 aaPredicted RBP16.46■□□□□ 0.23
PTPRA-208ENST00000455631 SSR3Q9UNL2 185 aa16.46■□□□□ 0.23
PTPRA-208ENST00000455631 HERC1Q15751 4861 aa16.46■□□□□ 0.23
PTPRA-208ENST00000455631 HNRNPCP07910 306 aaKnown RBP eCLIP16.45■□□□□ 0.22
PTPRA-208ENST00000455631 RNASE2P10153 161 aaKnown RBP16.45■□□□□ 0.22
PTPRA-208ENST00000455631 HLA-DRB4P13762 266 aa16.45■□□□□ 0.22
PTPRA-208ENST00000455631 PSMB9P28065 219 aa16.45■□□□□ 0.22
PTPRA-208ENST00000455631 SUB1P53999 127 aaKnown RBP eCLIP16.45■□□□□ 0.22
PTPRA-208ENST00000455631 FAM3BP58499 235 aaPredicted RBP16.45■□□□□ 0.22
PTPRA-208ENST00000455631 C6orf223Q8N319 242 aa16.45■□□□□ 0.22
PTPRA-208ENST00000455631 ATG101Q9BSB4 218 aa16.45■□□□□ 0.22
PTPRA-208ENST00000455631 YTHDF1Q9BYJ9 559 aaKnown RBP16.45■□□□□ 0.22
PTPRA-208ENST00000455631 U3KQE9 123 aa16.45■□□□□ 0.22
PTPRA-208ENST00000455631 HLA-DRB4X5D2U9 266 aa16.45■□□□□ 0.22
PTPRA-208ENST00000455631 IGKV1-17P01599 117 aa16.44■□□□□ 0.22
PTPRA-208ENST00000455631 IGKV3-20P01619 116 aa16.44■□□□□ 0.22
PTPRA-208ENST00000455631 MLANAQ16655 118 aa16.44■□□□□ 0.22
PTPRA-208ENST00000455631 HOXA1P49639 335 aaPredicted RBP16.43■□□□□ 0.22
PTPRA-208ENST00000455631 OXA1LQ15070 435 aa16.43■□□□□ 0.22
PTPRA-208ENST00000455631 NRG4Q8WWG1 115 aa16.43■□□□□ 0.22
PTPRA-208ENST00000455631 CNBD2Q96M20 576 aa16.43■□□□□ 0.22
PTPRA-208ENST00000455631 NRN1Q9NPD7 142 aa16.43■□□□□ 0.22
PTPRA-208ENST00000455631 ANAPC10Q9UM13 185 aa16.43■□□□□ 0.22
PTPRA-208ENST00000455631 NBDYA0A0U1RRE5 68 aa16.42■□□□□ 0.22
PTPRA-208ENST00000455631 INS-IGF2F8WCM5 200 aa16.42■□□□□ 0.22
PTPRA-208ENST00000455631 LPCAT3Q6P1A2 487 aa16.42■□□□□ 0.22
PTPRA-208ENST00000455631 PDCD10Q9BUL8 212 aa16.42■□□□□ 0.22
PTPRA-208ENST00000455631 SEPSECSQ9HD40 501 aaKnown RBP16.42■□□□□ 0.22
PTPRA-208ENST00000455631 YTHDF2Q9Y5A9 579 aaKnown RBP16.42■□□□□ 0.22
PTPRA-208ENST00000455631 APOBP04114 4563 aaKnown RBP16.41■□□□□ 0.22
PTPRA-208ENST00000455631 TRAV30A0A087WSZ9 112 aa16.41■□□□□ 0.22
PTPRA-208ENST00000455631 HRH1P35367 487 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms