RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 FAM90A1Q86YD7 464 aa9.24□□□□□ -0.93
DDR1-240ENST00000454612 FAM19A2Q8N3H0 131 aa9.24□□□□□ -0.93
DDR1-240ENST00000454612 WDR31Q8NA23 367 aa9.24□□□□□ -0.93
DDR1-240ENST00000454612 SNAI2O43623 268 aa9.24□□□□□ -0.93
DDR1-240ENST00000454612 KBTBD11O94819 623 aa9.24□□□□□ -0.93
DDR1-240ENST00000454612 IGKV1-16P04430 117 aa9.24□□□□□ -0.93
DDR1-240ENST00000454612 SLC25A5P05141 298 aaKnown RBP9.24□□□□□ -0.93
DDR1-240ENST00000454612 DUTP33316 252 aaKnown RBP9.24□□□□□ -0.93
DDR1-240ENST00000454612 LRRC10Q5BKY1 277 aa9.24□□□□□ -0.93
DDR1-240ENST00000454612 RNASE7Q9H1E1 156 aaKnown RBP9.24□□□□□ -0.93
DDR1-240ENST00000454612 GSX1Q9H4S2 264 aaPredicted RBP9.24□□□□□ -0.93
DDR1-240ENST00000454612 SERF1AO75920 110 aa9.24□□□□□ -0.93
DDR1-240ENST00000454612 ZNF134P52741 427 aa9.24□□□□□ -0.93
DDR1-240ENST00000454612 AARDQ4LEZ3 155 aa9.24□□□□□ -0.93
DDR1-240ENST00000454612 FAM90A2PQ658T7 463 aa9.24□□□□□ -0.93
DDR1-240ENST00000454612 ZNF474Q6S9Z5 364 aaPredicted RBP9.24□□□□□ -0.93
DDR1-240ENST00000454612 TNFSF13O75888 250 aa9.23□□□□□ -0.93
DDR1-240ENST00000454612 PSG1P11464 419 aa9.23□□□□□ -0.93
DDR1-240ENST00000454612 PRR30Q53SZ7 412 aaPredicted RBP9.23□□□□□ -0.93
DDR1-240ENST00000454612 MRPL18Q9H0U6 180 aaKnown RBP9.23□□□□□ -0.93
DDR1-240ENST00000454612 IGHV3OR16-13A0A075B7E8 117 aa9.23□□□□□ -0.93
DDR1-240ENST00000454612 IGHV3-74A0A0B4J1X5 117 aa9.23□□□□□ -0.93
DDR1-240ENST00000454612 DPRXA6NFQ7 191 aa9.23□□□□□ -0.93
DDR1-240ENST00000454612 LINC00869P0C866 280 aa9.23□□□□□ -0.93
DDR1-240ENST00000454612 SCGB2A2Q13296 93 aa9.23□□□□□ -0.93
DDR1-240ENST00000454612 ZNF146Q15072 292 aa9.23□□□□□ -0.93
DDR1-240ENST00000454612 MRPS18CQ9Y3D5 142 aaKnown RBP9.23□□□□□ -0.93
DDR1-240ENST00000454612 AHRRA9YTQ3 701 aa9.23□□□□□ -0.93
DDR1-240ENST00000454612 IL6RP08887 468 aaPredicted RBP9.23□□□□□ -0.93
DDR1-240ENST00000454612 ARL3P36405 182 aa9.23□□□□□ -0.93
DDR1-240ENST00000454612 RND2P52198 227 aa9.23□□□□□ -0.93
DDR1-240ENST00000454612 GNB2P62879 340 aa9.23□□□□□ -0.93
DDR1-240ENST00000454612 LINC00479Q96M42 142 aa9.23□□□□□ -0.93
DDR1-240ENST00000454612 TBL2Q9Y4P3 447 aaKnown RBP9.23□□□□□ -0.93
DDR1-240ENST00000454612 ZNF292O60281 2723 aa9.22□□□□□ -0.93
DDR1-240ENST00000454612 ZFHX4Q86UP3 3567 aa9.22□□□□□ -0.93
DDR1-240ENST00000454612 BSPH1Q075Z2 132 aa9.22□□□□□ -0.93
DDR1-240ENST00000454612 AMMECR1LQ6DCA0 310 aa9.22□□□□□ -0.93
DDR1-240ENST00000454612 TMEM170AQ8WVE7 144 aa9.22□□□□□ -0.93
DDR1-240ENST00000454612 NABP2Q9BQ15 211 aa9.22□□□□□ -0.93
DDR1-240ENST00000454612 MRPL20Q9BYC9 149 aaKnown RBP9.22□□□□□ -0.93
DDR1-240ENST00000454612 KALRNO60229 2985 aa9.22□□□□□ -0.93
DDR1-240ENST00000454612 COL12A1Q99715 3063 aa9.22□□□□□ -0.93
DDR1-240ENST00000454612 NCKAP5O14513 1909 aa9.22□□□□□ -0.93
DDR1-240ENST00000454612 IGKV3-7A0A075B6H7 116 aa9.22□□□□□ -0.93
DDR1-240ENST00000454612 PYYP10082 97 aa9.22□□□□□ -0.93
DDR1-240ENST00000454612 HSPE1P61604 102 aaKnown RBP9.22□□□□□ -0.93
DDR1-240ENST00000454612 CT45A1Q5HYN5 189 aa9.22□□□□□ -0.93
DDR1-240ENST00000454612 Q6ZSR3 168 aa9.22□□□□□ -0.93
DDR1-240ENST00000454612 CT45A3Q8NHU0 189 aa9.22□□□□□ -0.93
DDR1-240ENST00000454612 ZZEF1O43149 2961 aa9.22□□□□□ -0.93
DDR1-240ENST00000454612 PPIAL4EA0A075B759 164 aa9.22□□□□□ -0.93
DDR1-240ENST00000454612 PPIAL4DF5H284 164 aa9.22□□□□□ -0.93
DDR1-240ENST00000454612 GOSR1O95249 250 aa9.22□□□□□ -0.93
DDR1-240ENST00000454612 PPIAL4FP0DN26 164 aa9.22□□□□□ -0.93
DDR1-240ENST00000454612 ARF6P62330 175 aa9.22□□□□□ -0.93
DDR1-240ENST00000454612 NRN1LQ496H8 165 aa9.22□□□□□ -0.93
DDR1-240ENST00000454612 WDR73Q6P4I2 378 aa9.22□□□□□ -0.93
DDR1-240ENST00000454612 OCC1Q8TAD7 63 aa9.22□□□□□ -0.93
DDR1-240ENST00000454612 RAB9BQ9NP90 201 aa9.22□□□□□ -0.93
DDR1-240ENST00000454612 SCGB2A1O75556 95 aa9.21□□□□□ -0.93
DDR1-240ENST00000454612 CD40P25942 277 aa9.21□□□□□ -0.93
DDR1-240ENST00000454612 RELBQ01201 579 aa9.21□□□□□ -0.93
DDR1-240ENST00000454612 DAZAP2Q15038 168 aaPredicted RBP9.21□□□□□ -0.93
DDR1-240ENST00000454612 ANKRD39Q53RE8 183 aa9.21□□□□□ -0.93
DDR1-240ENST00000454612 NAA38Q9BRA0 125 aaKnown RBP9.21□□□□□ -0.93
DDR1-240ENST00000454612 GNB4Q9HAV0 340 aa9.21□□□□□ -0.93
DDR1-240ENST00000454612 SERTM2A0A1B0GWG4 89 aa9.21□□□□□ -0.94
DDR1-240ENST00000454612 TMEM238C9JI98 176 aa9.21□□□□□ -0.94
DDR1-240ENST00000454612 SS18L1O75177 396 aaPredicted RBP9.21□□□□□ -0.94
DDR1-240ENST00000454612 IGHV3-23P01764 117 aa9.21□□□□□ -0.94
DDR1-240ENST00000454612 BMI1P35226 326 aa9.21□□□□□ -0.94
DDR1-240ENST00000454612 GAGE1Q13065 139 aa9.21□□□□□ -0.94
DDR1-240ENST00000454612 ZNF114Q8NC26 417 aa9.21□□□□□ -0.94
DDR1-240ENST00000454612 ZBTB34Q8NCN2 500 aa9.21□□□□□ -0.94
DDR1-240ENST00000454612 RPEQ96AT9 228 aa9.21□□□□□ -0.94
DDR1-240ENST00000454612 TRBV24-1A0A075B6N3 115 aa9.21□□□□□ -0.94
DDR1-240ENST00000454612 J3KRW8 73 aa9.21□□□□□ -0.94
DDR1-240ENST00000454612 MFAP2P55001 183 aa9.21□□□□□ -0.94
DDR1-240ENST00000454612 LGALS4P56470 323 aa9.21□□□□□ -0.94
DDR1-240ENST00000454612 TREML4Q6UXN2 200 aa9.21□□□□□ -0.94
DDR1-240ENST00000454612 HSPB7Q9UBY9 170 aa9.21□□□□□ -0.94
DDR1-240ENST00000454612 INSIG2Q9Y5U4 225 aa9.21□□□□□ -0.94
DDR1-240ENST00000454612 ISLRO14498 428 aa9.2□□□□□ -0.94
DDR1-240ENST00000454612 CXorf1O96002 111 aa9.2□□□□□ -0.94
DDR1-240ENST00000454612 GPR6P46095 362 aaPredicted RBP9.2□□□□□ -0.94
DDR1-240ENST00000454612 TAS2R45P59539 299 aa9.2□□□□□ -0.94
DDR1-240ENST00000454612 DIAPH2-AS1Q14236 149 aa9.2□□□□□ -0.94
DDR1-240ENST00000454612 MSMPQ1L6U9 139 aa9.2□□□□□ -0.94
DDR1-240ENST00000454612 OR1L4Q8NGR5 311 aa9.2□□□□□ -0.94
DDR1-240ENST00000454612 KIAA1549Q9HCM3 1950 aa9.2□□□□□ -0.94
DDR1-240ENST00000454612 CCL25O15444 150 aa9.2□□□□□ -0.94
DDR1-240ENST00000454612 GCHFRP30047 84 aa9.2□□□□□ -0.94
DDR1-240ENST00000454612 GLRXP35754 106 aa9.2□□□□□ -0.94
DDR1-240ENST00000454612 FOXA3P55318 350 aaPredicted RBP9.2□□□□□ -0.94
DDR1-240ENST00000454612 GTSF1LQ9H1H1 148 aa9.2□□□□□ -0.94
DDR1-240ENST00000454612 C15orf62A8K5M9 175 aa9.2□□□□□ -0.94
DDR1-240ENST00000454612 GNG5P63218 68 aa9.2□□□□□ -0.94
DDR1-240ENST00000454612 OCIAD2Q56VL3 154 aa9.2□□□□□ -0.94
DDR1-240ENST00000454612 ODF3L1Q8IXM7 274 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms