RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 NPCDR1Q9BY65 106 aa12.83□□□□□ -0.36
SNX17-204ENST00000453453 INSIG2Q9Y5U4 225 aa12.83□□□□□ -0.36
SNX17-204ENST00000453453 SAA2-SAA4A0A096LPE2 208 aa12.82□□□□□ -0.36
SNX17-204ENST00000453453 A0A0U1RQK1 487 aa12.82□□□□□ -0.36
SNX17-204ENST00000453453 MDFIC2A0A1B0GVS7 189 aa12.82□□□□□ -0.36
SNX17-204ENST00000453453 ZNF320A2RRD8 509 aa12.82□□□□□ -0.36
SNX17-204ENST00000453453 RNF223E7ERA6 249 aa12.82□□□□□ -0.36
SNX17-204ENST00000453453 M0R1X1 148 aa12.82□□□□□ -0.36
SNX17-204ENST00000453453 DLEU1O43261 78 aa12.82□□□□□ -0.36
SNX17-204ENST00000453453 MSMBP08118 114 aa12.82□□□□□ -0.36
SNX17-204ENST00000453453 SAA2P0DJI9 122 aaPredicted RBP12.82□□□□□ -0.36
SNX17-204ENST00000453453 IZUMO4Q1ZYL8 232 aa12.82□□□□□ -0.36
SNX17-204ENST00000453453 PNKDQ8N490 385 aa12.82□□□□□ -0.36
SNX17-204ENST00000453453 C1orf159Q96HA4 380 aa12.82□□□□□ -0.36
SNX17-204ENST00000453453 FOXC2Q99958 501 aa12.82□□□□□ -0.36
SNX17-204ENST00000453453 MIEN1Q9BRT3 115 aa12.82□□□□□ -0.36
SNX17-204ENST00000453453 SIRPDQ9H106 197 aa12.82□□□□□ -0.36
SNX17-204ENST00000453453 CBY1Q9Y3M2 126 aa12.82□□□□□ -0.36
SNX17-204ENST00000453453 LY96Q9Y6Y9 160 aa12.82□□□□□ -0.36
SNX17-204ENST00000453453 UNC79Q9P2D8 2635 aa12.82□□□□□ -0.36
SNX17-204ENST00000453453 TRBV9A0A0B4J1U6 114 aa12.81□□□□□ -0.36
SNX17-204ENST00000453453 KRASP01116 189 aa12.81□□□□□ -0.36
SNX17-204ENST00000453453 EIF4EBP1Q13541 118 aaPredicted RBP12.81□□□□□ -0.36
SNX17-204ENST00000453453 RPL39P5Q59GN2 51 aa12.81□□□□□ -0.36
SNX17-204ENST00000453453 FAM71F2Q6NXP2 309 aa12.81□□□□□ -0.36
SNX17-204ENST00000453453 LINC01356Q8N9X3 169 aa12.81□□□□□ -0.36
SNX17-204ENST00000453453 CMTM2Q8TAZ6 248 aa12.81□□□□□ -0.36
SNX17-204ENST00000453453 TMEM186Q96B77 213 aa12.81□□□□□ -0.36
SNX17-204ENST00000453453 ADTRPQ96IZ2 230 aa12.81□□□□□ -0.36
SNX17-204ENST00000453453 A0A096LNT2 108 aa12.8□□□□□ -0.36
SNX17-204ENST00000453453 FAM90A9PA6NNJ1 464 aa12.8□□□□□ -0.36
SNX17-204ENST00000453453 GATA3P23771 443 aa12.8□□□□□ -0.36
SNX17-204ENST00000453453 THBS3P49746 956 aa12.8□□□□□ -0.36
SNX17-204ENST00000453453 TMEM183BQ1AE95 376 aa12.8□□□□□ -0.36
SNX17-204ENST00000453453 HLA-DRB5Q30154 266 aa12.8□□□□□ -0.36
SNX17-204ENST00000453453 COX19Q49B96 90 aa12.8□□□□□ -0.36
SNX17-204ENST00000453453 C5orf30Q96GV9 206 aa12.8□□□□□ -0.36
SNX17-204ENST00000453453 WDR83OSQ9Y284 106 aa12.8□□□□□ -0.36
SNX17-204ENST00000453453 ABCA2Q9BZC7 2435 aa12.8□□□□□ -0.36
SNX17-204ENST00000453453 HECTD1Q9ULT8 2610 aa12.8□□□□□ -0.36
SNX17-204ENST00000453453 HPRT1P00492 218 aa12.8□□□□□ -0.36
SNX17-204ENST00000453453 DUTP33316 252 aaKnown RBP12.8□□□□□ -0.36
SNX17-204ENST00000453453 KIR2DS2P43631 304 aa12.8□□□□□ -0.36
SNX17-204ENST00000453453 GNB1P62873 340 aa12.8□□□□□ -0.36
SNX17-204ENST00000453453 RPL19P84098 196 aaKnown RBP12.8□□□□□ -0.36
SNX17-204ENST00000453453 AARDQ4LEZ3 155 aa12.8□□□□□ -0.36
SNX17-204ENST00000453453 ZNF833PQ6ZTB9 187 aa12.8□□□□□ -0.36
SNX17-204ENST00000453453 KRTAP1-3Q8IUG1 177 aa12.8□□□□□ -0.36
SNX17-204ENST00000453453 OR11H6Q8NGC7 330 aa12.8□□□□□ -0.36
SNX17-204ENST00000453453 DTD1Q8TEA8 209 aa12.8□□□□□ -0.36
SNX17-204ENST00000453453 SFRP2Q96HF1 295 aa12.8□□□□□ -0.36
SNX17-204ENST00000453453 TBX15Q96SF7 602 aa12.8□□□□□ -0.36
SNX17-204ENST00000453453 IGLV1-47P01700 117 aa12.79□□□□□ -0.36
SNX17-204ENST00000453453 ZNF25P17030 456 aaPredicted RBP12.79□□□□□ -0.36
SNX17-204ENST00000453453 NPPCP23582 126 aa12.79□□□□□ -0.36
SNX17-204ENST00000453453 CHRNA7P36544 502 aa12.79□□□□□ -0.36
SNX17-204ENST00000453453 CEACAM3P40198 252 aa12.79□□□□□ -0.36
SNX17-204ENST00000453453 ZNF137PP52743 207 aa12.79□□□□□ -0.36
SNX17-204ENST00000453453 RPP30P78346 268 aaKnown RBP12.79□□□□□ -0.36
SNX17-204ENST00000453453 PAX8Q06710 450 aa12.79□□□□□ -0.36
SNX17-204ENST00000453453 Q0VG73 95 aa12.79□□□□□ -0.36
SNX17-204ENST00000453453 ZNRD1Q9P1U0 126 aa12.79□□□□□ -0.36
SNX17-204ENST00000453453 GOLT1BQ9Y3E0 138 aa12.79□□□□□ -0.36
SNX17-204ENST00000453453 WNK2Q9Y3S1 2297 aa12.79□□□□□ -0.36
SNX17-204ENST00000453453 ZNF705FA8MVS1 300 aaPredicted RBP12.78□□□□□ -0.36
SNX17-204ENST00000453453 ZNF705DP0CH99 300 aaPredicted RBP12.78□□□□□ -0.36
SNX17-204ENST00000453453 ZNF705BP0CI00 300 aaPredicted RBP12.78□□□□□ -0.36
SNX17-204ENST00000453453 HOXB4P17483 251 aaPredicted RBP12.78□□□□□ -0.36
SNX17-204ENST00000453453 DLX1P56177 255 aa12.78□□□□□ -0.36
SNX17-204ENST00000453453 PRB3Q04118 309 aaPredicted RBP12.78□□□□□ -0.36
SNX17-204ENST00000453453 ARL2-SNX15V9GYD0 113 aa12.78□□□□□ -0.36
SNX17-204ENST00000453453 BUB1B-PAK6H3BSN5 160 aa12.77□□□□□ -0.36
SNX17-204ENST00000453453 HTR1DP28221 377 aa12.77□□□□□ -0.36
SNX17-204ENST00000453453 OPRK1P41145 380 aa12.77□□□□□ -0.36
SNX17-204ENST00000453453 LGALS4P56470 323 aa12.77□□□□□ -0.36
SNX17-204ENST00000453453 RPL30P62888 115 aaKnown RBP12.77□□□□□ -0.36
SNX17-204ENST00000453453 KLRD1Q13241 179 aa12.77□□□□□ -0.36
SNX17-204ENST00000453453 GATAD1Q8WUU5 269 aa12.77□□□□□ -0.36
SNX17-204ENST00000453453 HIF1ANQ9NWT6 349 aa12.77□□□□□ -0.36
SNX17-204ENST00000453453 IL36BQ9NZH7 164 aa12.77□□□□□ -0.36
SNX17-204ENST00000453453 LINC00473A8K010 186 aa12.77□□□□□ -0.37
SNX17-204ENST00000453453 C9JCJ5 164 aa12.77□□□□□ -0.37
SNX17-204ENST00000453453 PROP1O75360 226 aa12.77□□□□□ -0.37
SNX17-204ENST00000453453 APOA2P02652 100 aa12.77□□□□□ -0.37
SNX17-204ENST00000453453 CD1BP29016 333 aa12.77□□□□□ -0.37
SNX17-204ENST00000453453 ADMP35318 185 aa12.77□□□□□ -0.37
SNX17-204ENST00000453453 UBE2E1P51965 193 aa12.77□□□□□ -0.37
SNX17-204ENST00000453453 TPTE2P1Q5T6R2 138 aa12.77□□□□□ -0.37
SNX17-204ENST00000453453 OR4P4Q8NGL7 312 aa12.77□□□□□ -0.37
SNX17-204ENST00000453453 OR10G8Q8NGN5 311 aa12.77□□□□□ -0.37
SNX17-204ENST00000453453 SGMS2Q8NHU3 365 aa12.77□□□□□ -0.37
SNX17-204ENST00000453453 C11orf52Q96A22 123 aa12.77□□□□□ -0.37
SNX17-204ENST00000453453 RPEQ96AT9 228 aa12.77□□□□□ -0.37
SNX17-204ENST00000453453 TMEM208Q9BTX3 173 aa12.77□□□□□ -0.37
SNX17-204ENST00000453453 CR1P17927 2039 aa12.77□□□□□ -0.37
SNX17-204ENST00000453453 MED13LQ71F56 2210 aa12.76□□□□□ -0.37
SNX17-204ENST00000453453 ODF3BA8MYP8 253 aa12.76□□□□□ -0.37
SNX17-204ENST00000453453 J3QLI3 93 aa12.76□□□□□ -0.37
SNX17-204ENST00000453453 RBFOX2O43251 390 aaKnown RBP eCLIP12.76□□□□□ -0.377e-7■■■□□ 17
SNX17-204ENST00000453453 FCGR3BO75015 233 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms