RNA–Protein interactions for RNA: ENST00000449421.6

NUP85-202, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-202ENST00000449421 MISP3Q96FF7 219 aa10.03□□□□□ -0.8
NUP85-202ENST00000449421 C1orf159Q96HA4 380 aa10.03□□□□□ -0.8
NUP85-202ENST00000449421 ACY3Q96HD9 319 aa10.03□□□□□ -0.8
NUP85-202ENST00000449421 MRPL32Q9BYC8 188 aaKnown RBP10.03□□□□□ -0.8
NUP85-202ENST00000449421 SMCO4Q9NRQ5 59 aa10.03□□□□□ -0.8
NUP85-202ENST00000449421 TECRQ9NZ01 308 aaKnown RBP10.03□□□□□ -0.8
NUP85-202ENST00000449421 DOCK11Q5JSL3 2073 aa10.03□□□□□ -0.8
NUP85-202ENST00000449421 CSMD2Q7Z408 3487 aa10.03□□□□□ -0.8
NUP85-202ENST00000449421 MALRD1Q5VYJ5 2156 aa10.02□□□□□ -0.8
NUP85-202ENST00000449421 IGHV4-61A0A0C4DH41 118 aa10.02□□□□□ -0.81
NUP85-202ENST00000449421 TCRBV4S1A1TA0A5B7 111 aa10.02□□□□□ -0.81
NUP85-202ENST00000449421 NCBP2LA6PVI3 153 aaKnown RBP10.02□□□□□ -0.81
NUP85-202ENST00000449421 B4DSR2 109 aa10.02□□□□□ -0.81
NUP85-202ENST00000449421 TEX22C9J3V5 150 aa10.02□□□□□ -0.81
NUP85-202ENST00000449421 DNASE2O00115 360 aaPredicted RBP10.02□□□□□ -0.81
NUP85-202ENST00000449421 PDE6DO43924 150 aa10.02□□□□□ -0.81
NUP85-202ENST00000449421 DEFA4P12838 97 aa10.02□□□□□ -0.81
NUP85-202ENST00000449421 BPIFB3P59826 476 aa10.02□□□□□ -0.81
NUP85-202ENST00000449421 Q8N6K4 173 aa10.02□□□□□ -0.81
NUP85-202ENST00000449421 NPIPB3Q92617 1050 aa10.02□□□□□ -0.81
NUP85-202ENST00000449421 TVP23CQ96ET8 276 aa10.02□□□□□ -0.81
NUP85-202ENST00000449421 TMEM167BQ9NRX6 74 aa10.02□□□□□ -0.81
NUP85-202ENST00000449421 FUT9Q9Y231 359 aa10.02□□□□□ -0.81
NUP85-202ENST00000449421 PRELID1Q9Y255 219 aa10.02□□□□□ -0.81
NUP85-202ENST00000449421 ARL2-SNX15V9GYD0 113 aa10.02□□□□□ -0.81
NUP85-202ENST00000449421 IGHV4-30-2A0A087WSY4 118 aa10.01□□□□□ -0.81
NUP85-202ENST00000449421 ELOA3CA0A087WX78 387 aaPredicted RBP10.01□□□□□ -0.81
NUP85-202ENST00000449421 A0A096LNT2 108 aa10.01□□□□□ -0.81
NUP85-202ENST00000449421 TRAV20A0A0B4J274 112 aa10.01□□□□□ -0.81
NUP85-202ENST00000449421 F6UZH7 168 aa10.01□□□□□ -0.81
NUP85-202ENST00000449421 FCN1O00602 326 aa10.01□□□□□ -0.81
NUP85-202ENST00000449421 SCGB2A1O75556 95 aa10.01□□□□□ -0.81
NUP85-202ENST00000449421 MSMBP08118 114 aa10.01□□□□□ -0.81
NUP85-202ENST00000449421 AREGP15514 252 aa10.01□□□□□ -0.81
NUP85-202ENST00000449421 SAA4P35542 130 aa10.01□□□□□ -0.81
NUP85-202ENST00000449421 NPBWR1P48145 328 aa10.01□□□□□ -0.81
NUP85-202ENST00000449421 CEBPGP53567 150 aa10.01□□□□□ -0.81
NUP85-202ENST00000449421 FAM78BQ5VT40 261 aa10.01□□□□□ -0.81
NUP85-202ENST00000449421 PQLC2Q6ZP29 291 aa10.01□□□□□ -0.81
NUP85-202ENST00000449421 CYB561D1Q8N8Q1 229 aa10.01□□□□□ -0.81
NUP85-202ENST00000449421 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.01□□□□□ -0.81
NUP85-202ENST00000449421 TMEM116Q8NCL8 245 aa10.01□□□□□ -0.81
NUP85-202ENST00000449421 OR2T6Q8NHC8 308 aa10.01□□□□□ -0.81
NUP85-202ENST00000449421 TRGV9Q99603 122 aa10.01□□□□□ -0.81
NUP85-202ENST00000449421 RASL11BQ9BPW5 248 aa10.01□□□□□ -0.81
NUP85-202ENST00000449421 WNT10AQ9GZT5 417 aa10.01□□□□□ -0.81
NUP85-202ENST00000449421 TUBA4BQ9H853 241 aa10.01□□□□□ -0.81
NUP85-202ENST00000449421 DNAJC4Q9NNZ3 241 aa10.01□□□□□ -0.81
NUP85-202ENST00000449421 RPS10P5Q9NQ39 176 aa10.01□□□□□ -0.81
NUP85-202ENST00000449421 THYN1Q9P016 225 aa10.01□□□□□ -0.81
NUP85-202ENST00000449421 PUS1Q9Y606 427 aaKnown RBP eCLIP10.01□□□□□ -0.81
NUP85-202ENST00000449421 AKAP6Q13023 2319 aa10□□□□□ -0.81
NUP85-202ENST00000449421 SPG11Q96JI7 2443 aa10□□□□□ -0.81
NUP85-202ENST00000449421 IGHV1-69DA0A0B4J2H0 117 aa10□□□□□ -0.81
NUP85-202ENST00000449421 CENPVL3A0A0U1RRI6 287 aa10□□□□□ -0.81
NUP85-202ENST00000449421 C7orf77A4D0Y5 90 aa10□□□□□ -0.81
NUP85-202ENST00000449421 NPIPB5A8MRT5 1133 aa10□□□□□ -0.81
NUP85-202ENST00000449421 H3BQ15 152 aa10□□□□□ -0.81
NUP85-202ENST00000449421 HMGB3O15347 200 aaKnown RBP10□□□□□ -0.81
NUP85-202ENST00000449421 IGHV1-69P01742 117 aa10□□□□□ -0.81
NUP85-202ENST00000449421 REG1AP05451 166 aa10□□□□□ -0.81
NUP85-202ENST00000449421 OR5G3P0C626 314 aa10□□□□□ -0.81
NUP85-202ENST00000449421 CTRB1P17538 263 aa10□□□□□ -0.81
NUP85-202ENST00000449421 MLANAQ16655 118 aa10□□□□□ -0.81
NUP85-202ENST00000449421 CTRB2Q6GPI1 263 aa10□□□□□ -0.81
NUP85-202ENST00000449421 SPNS3Q6ZMD2 512 aa10□□□□□ -0.81
NUP85-202ENST00000449421 S100A7AQ86SG5 101 aa10□□□□□ -0.81
NUP85-202ENST00000449421 STXBP6Q8NFX7 210 aa10□□□□□ -0.81
NUP85-202ENST00000449421 ARPC1AQ92747 370 aa10□□□□□ -0.81
NUP85-202ENST00000449421 TMEM68Q96MH6 324 aa10□□□□□ -0.81
NUP85-202ENST00000449421 SLC25A33Q9BSK2 321 aa10□□□□□ -0.81
NUP85-202ENST00000449421 FNDC4Q9H6D8 234 aaPredicted RBP10□□□□□ -0.81
NUP85-202ENST00000449421 TET2Q6N021 2002 aaPredicted RBP10□□□□□ -0.81
NUP85-202ENST00000449421 POLQO75417 2590 aa9.99□□□□□ -0.81
NUP85-202ENST00000449421 TRAV30A0A087WSZ9 112 aa9.99□□□□□ -0.81
NUP85-202ENST00000449421 CYSRT1A8MQ03 144 aa9.99□□□□□ -0.81
NUP85-202ENST00000449421 ZNF727A8MUV8 499 aa9.99□□□□□ -0.81
NUP85-202ENST00000449421 TSPAN4O14817 238 aa9.99□□□□□ -0.81
NUP85-202ENST00000449421 COX7A2P2O60397 106 aa9.99□□□□□ -0.81
NUP85-202ENST00000449421 PAGE4O60829 102 aa9.99□□□□□ -0.81
NUP85-202ENST00000449421 C8orf88P0DMB2 117 aa9.99□□□□□ -0.81
NUP85-202ENST00000449421 HIST1H1BP16401 226 aaKnown RBP9.99□□□□□ -0.81
NUP85-202ENST00000449421 GCHFRP30047 84 aa9.99□□□□□ -0.81
NUP85-202ENST00000449421 RND2P52198 227 aa9.99□□□□□ -0.81
NUP85-202ENST00000449421 LOXL1Q08397 574 aaPredicted RBP9.99□□□□□ -0.81
NUP85-202ENST00000449421 AWAT1Q58HT5 328 aa9.99□□□□□ -0.81
NUP85-202ENST00000449421 GCSAMLQ5JQS6 135 aa9.99□□□□□ -0.81
NUP85-202ENST00000449421 DYNAPQ8N1N2 210 aa9.99□□□□□ -0.81
NUP85-202ENST00000449421 TTC9CQ8N5M4 171 aa9.99□□□□□ -0.81
NUP85-202ENST00000449421 OR4F5Q8NH21 305 aa9.99□□□□□ -0.81
NUP85-202ENST00000449421 Q96MF0 132 aa9.99□□□□□ -0.81
NUP85-202ENST00000449421 UHRF2Q96PU4 802 aa9.99□□□□□ -0.81
NUP85-202ENST00000449421 OR4F4Q96R69 305 aa9.99□□□□□ -0.81
NUP85-202ENST00000449421 TMPRSS5Q9H3S3 457 aa9.99□□□□□ -0.81
NUP85-202ENST00000449421 TNFRSF19Q9NS68 423 aa9.99□□□□□ -0.81
NUP85-202ENST00000449421 PRRC2AP48634 2157 aaKnown RBP9.99□□□□□ -0.81
NUP85-202ENST00000449421 IGKV1OR2-108A0A075B7D4 117 aa9.98□□□□□ -0.81
NUP85-202ENST00000449421 A0A087WWC5 75 aa9.98□□□□□ -0.81
NUP85-202ENST00000449421 C11orf94C9JXX5 98 aa9.98□□□□□ -0.81
NUP85-202ENST00000449421 HLA-DRB1P01911 266 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms