RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 TMEM167BQ9NRX6 74 aa8.8□□□□□ -1
LINC00342-202ENST00000448494 DEPPQ9NTK1 212 aa8.8□□□□□ -1
LINC00342-202ENST00000448494 IL36RNQ9UBH0 155 aa8.8□□□□□ -1
LINC00342-202ENST00000448494 SNRNP200O75643 2136 aaKnown RBP8.8□□□□□ -1
LINC00342-202ENST00000448494 MGST3O14880 152 aa8.79□□□□□ -1
LINC00342-202ENST00000448494 CFIP05156 583 aa8.79□□□□□ -1
LINC00342-202ENST00000448494 FOXA3P55318 350 aaPredicted RBP8.79□□□□□ -1
LINC00342-202ENST00000448494 LRRC75A-AS1Q8N1F1 130 aa8.79□□□□□ -1
LINC00342-202ENST00000448494 CHAC1Q9BUX1 264 aa8.79□□□□□ -1
LINC00342-202ENST00000448494 UBTD1Q9HAC8 227 aa8.79□□□□□ -1
LINC00342-202ENST00000448494 IGKV1-6A0A0C4DH72 117 aa8.79□□□□□ -1
LINC00342-202ENST00000448494 TNFSF11O14788 317 aa8.79□□□□□ -1
LINC00342-202ENST00000448494 SNCGO76070 127 aa8.79□□□□□ -1
LINC00342-202ENST00000448494 PPIFP30405 207 aaKnown RBP8.79□□□□□ -1
LINC00342-202ENST00000448494 ASIPP42127 132 aa8.79□□□□□ -1
LINC00342-202ENST00000448494 SMCPP49901 116 aaPredicted RBP8.79□□□□□ -1
LINC00342-202ENST00000448494 SUMO3P55854 103 aaPredicted RBP8.79□□□□□ -1
LINC00342-202ENST00000448494 TAL2Q16559 108 aa8.79□□□□□ -1
LINC00342-202ENST00000448494 Q6P435 159 aa8.79□□□□□ -1
LINC00342-202ENST00000448494 TREML4Q6UXN2 200 aa8.79□□□□□ -1
LINC00342-202ENST00000448494 Q6ZR03 302 aa8.79□□□□□ -1
LINC00342-202ENST00000448494 TEN1Q86WV5 123 aa8.79□□□□□ -1
LINC00342-202ENST00000448494 PCP2Q8IVA1 136 aa8.79□□□□□ -1
LINC00342-202ENST00000448494 SHISA5Q8N114 240 aa8.79□□□□□ -1
LINC00342-202ENST00000448494 RBMXL3Q8N7X1 1067 aaKnown RBP8.79□□□□□ -1
LINC00342-202ENST00000448494 SSBP3Q9BWW4 388 aaPredicted RBP8.79□□□□□ -1
LINC00342-202ENST00000448494 SLC25A10Q9UBX3 287 aaPredicted RBP8.79□□□□□ -1
LINC00342-202ENST00000448494 F11RQ9Y624 299 aaKnown RBP8.79□□□□□ -1
LINC00342-202ENST00000448494 COL6A3P12111 3177 aa8.78□□□□□ -1
LINC00342-202ENST00000448494 IGKV1-27A0A075B6S5 117 aa8.78□□□□□ -1
LINC00342-202ENST00000448494 IGKV1-12A0A0C4DH73 117 aa8.78□□□□□ -1
LINC00342-202ENST00000448494 C5orf63A6NC05 138 aa8.78□□□□□ -1
LINC00342-202ENST00000448494 HIGD1CA8MV81 97 aa8.78□□□□□ -1
LINC00342-202ENST00000448494 NPIPB6E9PJ23 425 aa8.78□□□□□ -1
LINC00342-202ENST00000448494 IGKV1D-12P01611 117 aa8.78□□□□□ -1
LINC00342-202ENST00000448494 DSCR4P56555 118 aaPredicted RBP8.78□□□□□ -1
LINC00342-202ENST00000448494 KIR2DL4Q99706 377 aa8.78□□□□□ -1
LINC00342-202ENST00000448494 TMUB1Q9BVT8 246 aa8.78□□□□□ -1
LINC00342-202ENST00000448494 ONECUT1Q9UBC0 465 aa8.78□□□□□ -1
LINC00342-202ENST00000448494 CUL9Q8IWT3 2517 aa8.78□□□□□ -1
LINC00342-202ENST00000448494 F8WDY8 70 aa8.78□□□□□ -1
LINC00342-202ENST00000448494 C15orf65H3BRN8 121 aa8.78□□□□□ -1
LINC00342-202ENST00000448494 ZIC3O60481 467 aa8.78□□□□□ -1
LINC00342-202ENST00000448494 CSN3P07498 182 aa8.78□□□□□ -1
LINC00342-202ENST00000448494 MYOD1P15172 320 aa8.78□□□□□ -1
LINC00342-202ENST00000448494 RPL30P62888 115 aaKnown RBP8.78□□□□□ -1
LINC00342-202ENST00000448494 C12orf74Q32Q52 190 aa8.78□□□□□ -1
LINC00342-202ENST00000448494 PCSK4Q6UW60 755 aa8.78□□□□□ -1
LINC00342-202ENST00000448494 FOXL2NBQ6ZUU3 175 aa8.78□□□□□ -1
LINC00342-202ENST00000448494 FGFRL1Q8N441 504 aa8.78□□□□□ -1
LINC00342-202ENST00000448494 PIP4P2Q8N4L2 257 aa8.78□□□□□ -1
LINC00342-202ENST00000448494 RASL10AQ92737 203 aa8.78□□□□□ -1
LINC00342-202ENST00000448494 BORCS8Q96FH0 119 aa8.78□□□□□ -1
LINC00342-202ENST00000448494 CARD19Q96LW7 228 aa8.78□□□□□ -1
LINC00342-202ENST00000448494 HSD17B10Q99714 261 aaKnown RBP8.78□□□□□ -1
LINC00342-202ENST00000448494 ZNF355PQ9NSJ1 428 aa8.78□□□□□ -1
LINC00342-202ENST00000448494 DLL3Q9NYJ7 618 aa8.78□□□□□ -1
LINC00342-202ENST00000448494 TNFSF14O43557 240 aa8.77□□□□□ -1.01
LINC00342-202ENST00000448494 COL9A1P20849 921 aa8.77□□□□□ -1.01
LINC00342-202ENST00000448494 CD27P26842 260 aa8.77□□□□□ -1.01
LINC00342-202ENST00000448494 NMUP48645 174 aa8.77□□□□□ -1.01
LINC00342-202ENST00000448494 TMEM52BQ4KMG9 183 aa8.77□□□□□ -1.01
LINC00342-202ENST00000448494 ST8SIA1Q92185 356 aa8.77□□□□□ -1.01
LINC00342-202ENST00000448494 SNRNP40Q96DI7 357 aaKnown RBP8.77□□□□□ -1.01
LINC00342-202ENST00000448494 LINC00479Q96M42 142 aa8.77□□□□□ -1.01
LINC00342-202ENST00000448494 AP5S1Q9NUS5 200 aa8.77□□□□□ -1.01
LINC00342-202ENST00000448494 RANBP2P49792 3224 aaKnown RBP8.77□□□□□ -1.01
LINC00342-202ENST00000448494 FAM106CPP0CH98 169 aa8.77□□□□□ -1.01
LINC00342-202ENST00000448494 IGLV3-21P80748 117 aaPredicted RBP8.77□□□□□ -1.01
LINC00342-202ENST00000448494 FAM106AQ4KMX7 169 aa8.77□□□□□ -1.01
LINC00342-202ENST00000448494 YAF2Q8IY57 180 aa8.77□□□□□ -1.01
LINC00342-202ENST00000448494 C1orf162Q8NEQ5 155 aaPredicted RBP8.77□□□□□ -1.01
LINC00342-202ENST00000448494 DLX4Q92988 240 aaPredicted RBP8.77□□□□□ -1.01
LINC00342-202ENST00000448494 BMFQ96LC9 184 aa8.77□□□□□ -1.01
LINC00342-202ENST00000448494 ZG16O60844 167 aa8.76□□□□□ -1.01
LINC00342-202ENST00000448494 P0C879 139 aa8.76□□□□□ -1.01
LINC00342-202ENST00000448494 GLRXP35754 106 aa8.76□□□□□ -1.01
LINC00342-202ENST00000448494 EFNB3Q15768 340 aa8.76□□□□□ -1.01
LINC00342-202ENST00000448494 ZNF808Q8N4W9 903 aaPredicted RBP8.76□□□□□ -1.01
LINC00342-202ENST00000448494 OR10J6PQ8NGY7 276 aa8.76□□□□□ -1.01
LINC00342-202ENST00000448494 OR13C6PQ8NH95 151 aa8.76□□□□□ -1.01
LINC00342-202ENST00000448494 DEFB118Q96PH6 123 aa8.76□□□□□ -1.01
LINC00342-202ENST00000448494 FBXL15Q9H469 300 aa8.76□□□□□ -1.01
LINC00342-202ENST00000448494 A0A1W2PPI3 338 aa8.76□□□□□ -1.01
LINC00342-202ENST00000448494 A0A1W2PQD3 144 aa8.76□□□□□ -1.01
LINC00342-202ENST00000448494 WISP2O76076 250 aa8.76□□□□□ -1.01
LINC00342-202ENST00000448494 PRNPP04156 253 aa8.76□□□□□ -1.01
LINC00342-202ENST00000448494 MYF5P13349 255 aa8.76□□□□□ -1.01
LINC00342-202ENST00000448494 KIR2DS2P43631 304 aa8.76□□□□□ -1.01
LINC00342-202ENST00000448494 CLRN1P58418 232 aa8.76□□□□□ -1.01
LINC00342-202ENST00000448494 PPP1R27Q86WC6 154 aa8.76□□□□□ -1.01
LINC00342-202ENST00000448494 TDHQ8IZJ6 230 aa8.76□□□□□ -1.01
LINC00342-202ENST00000448494 RPRMLQ8N4K4 120 aa8.76□□□□□ -1.01
LINC00342-202ENST00000448494 CYB5D2Q8WUJ1 264 aa8.76□□□□□ -1.01
LINC00342-202ENST00000448494 AJUBAQ96IF1 538 aa8.76□□□□□ -1.01
LINC00342-202ENST00000448494 LINC01587Q99440 93 aa8.76□□□□□ -1.01
LINC00342-202ENST00000448494 MGST2Q99735 147 aa8.76□□□□□ -1.01
LINC00342-202ENST00000448494 PRTFDC1Q9NRG1 225 aa8.76□□□□□ -1.01
LINC00342-202ENST00000448494 PCDH15Q96QU1 1955 aa8.75□□□□□ -1.01
LINC00342-202ENST00000448494 A0A1B0GX51 115 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms