RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 K7EIM0 57 aa16.15■□□□□ 0.18
CHD3-204ENST00000439235 BCL2L11O43521 198 aa16.15■□□□□ 0.18
CHD3-204ENST00000439235 NDUFB8O95169 186 aa16.15■□□□□ 0.18
CHD3-204ENST00000439235 PSMB8P28062 276 aa16.15■□□□□ 0.18
CHD3-204ENST00000439235 KLHDC1Q8N7A1 406 aa16.15■□□□□ 0.18
CHD3-204ENST00000439235 VN1R17PQ8TDU5 208 aa16.15■□□□□ 0.18
CHD3-204ENST00000439235 USMG5Q96IX5 58 aa16.15■□□□□ 0.18
CHD3-204ENST00000439235 CXorf58Q96LI9 332 aa16.15■□□□□ 0.18
CHD3-204ENST00000439235 UQCC1Q9NVA1 299 aa16.15■□□□□ 0.18
CHD3-204ENST00000439235 SMCO3A2RU48 225 aa16.14■□□□□ 0.17
CHD3-204ENST00000439235 CLPSL1A2RUU4 121 aa16.14■□□□□ 0.17
CHD3-204ENST00000439235 ATP5G2Q06055 141 aa16.14■□□□□ 0.17
CHD3-204ENST00000439235 ZNF266Q14584 549 aa16.14■□□□□ 0.17
CHD3-204ENST00000439235 C15orf32Q32M92 178 aa16.14■□□□□ 0.17
CHD3-204ENST00000439235 LAMTOR1Q6IAA8 161 aa16.14■□□□□ 0.17
CHD3-204ENST00000439235 OR4X2Q8NGF9 303 aa16.14■□□□□ 0.17
CHD3-204ENST00000439235 RNF114Q9Y508 228 aa16.14■□□□□ 0.17
CHD3-204ENST00000439235 BORCS7-ASMTA0A0B4J1R7 106 aa16.13■□□□□ 0.17
CHD3-204ENST00000439235 IGHV3-21A0A0B4J1V1 117 aa16.13■□□□□ 0.17
CHD3-204ENST00000439235 A0A0G2JLM5 398 aa16.13■□□□□ 0.17
CHD3-204ENST00000439235 RAB9AP51151 201 aa16.13■□□□□ 0.17
CHD3-204ENST00000439235 DEFA5Q01523 94 aa16.13■□□□□ 0.17
CHD3-204ENST00000439235 AKR1C1Q04828 323 aa16.13■□□□□ 0.17
CHD3-204ENST00000439235 VWC2Q2TAL6 325 aa16.13■□□□□ 0.17
CHD3-204ENST00000439235 ACSM6Q6P461 480 aa16.13■□□□□ 0.17
CHD3-204ENST00000439235 C10orf99Q6UWK7 81 aa16.13■□□□□ 0.17
CHD3-204ENST00000439235 EEF1AKMT3Q96AZ1 226 aa16.13■□□□□ 0.17
CHD3-204ENST00000439235 C21orf62Q9NYP8 219 aa16.13■□□□□ 0.17
CHD3-204ENST00000439235 UBE2L5PA0A1B0GUS4 154 aa16.12■□□□□ 0.17
CHD3-204ENST00000439235 IFNA5P01569 189 aa16.12■□□□□ 0.17
CHD3-204ENST00000439235 MFAP4P55083 255 aa16.12■□□□□ 0.17
CHD3-204ENST00000439235 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.12■□□□□ 0.17
CHD3-204ENST00000439235 RNF152Q8N8N0 203 aa16.12■□□□□ 0.17
CHD3-204ENST00000439235 OR5AU1Q8NGC0 362 aa16.12■□□□□ 0.17
CHD3-204ENST00000439235 SCARB1Q8WTV0 552 aa16.12■□□□□ 0.17
CHD3-204ENST00000439235 ACY3Q96HD9 319 aa16.12■□□□□ 0.17
CHD3-204ENST00000439235 KLK15Q9H2R5 256 aa16.12■□□□□ 0.17
CHD3-204ENST00000439235 NPVFQ9HCQ7 196 aa16.12■□□□□ 0.17
CHD3-204ENST00000439235 MFSD2BA6NFX1 497 aa16.11■□□□□ 0.17
CHD3-204ENST00000439235 SCGB2A1O75556 95 aa16.11■□□□□ 0.17
CHD3-204ENST00000439235 MDKP21741 143 aaPredicted RBP16.11■□□□□ 0.17
CHD3-204ENST00000439235 NPBWR1P48145 328 aa16.11■□□□□ 0.17
CHD3-204ENST00000439235 RND2P52198 227 aa16.11■□□□□ 0.17
CHD3-204ENST00000439235 FOXL1Q12952 345 aa16.11■□□□□ 0.17
CHD3-204ENST00000439235 GAMTQ14353 236 aa16.11■□□□□ 0.17
CHD3-204ENST00000439235 OPCMLQ14982 345 aa16.11■□□□□ 0.17
CHD3-204ENST00000439235 MLANAQ16655 118 aa16.11■□□□□ 0.17
CHD3-204ENST00000439235 TMEM116Q8NCL8 245 aa16.11■□□□□ 0.17
CHD3-204ENST00000439235 OR4X1Q8NH49 305 aa16.11■□□□□ 0.17
CHD3-204ENST00000439235 WFDC1Q9HC57 220 aa16.11■□□□□ 0.17
CHD3-204ENST00000439235 TRBV7-1A0A0A6YYK4 115 aa16.1■□□□□ 0.17
CHD3-204ENST00000439235 JTBO76095 146 aa16.1■□□□□ 0.17
CHD3-204ENST00000439235 IGHV3-48P01763 117 aa16.1■□□□□ 0.17
CHD3-204ENST00000439235 PROK1P58294 105 aa16.1■□□□□ 0.17
CHD3-204ENST00000439235 EIF5AP63241 154 aaKnown RBP16.1■□□□□ 0.17
CHD3-204ENST00000439235 TMEM144Q7Z5S9 345 aa16.1■□□□□ 0.17
CHD3-204ENST00000439235 WIPF2Q8TF74 440 aaPredicted RBP16.1■□□□□ 0.17
CHD3-204ENST00000439235 ATP6V0BQ99437 205 aa16.1■□□□□ 0.17
CHD3-204ENST00000439235 TXN2Q99757 166 aa16.1■□□□□ 0.17
CHD3-204ENST00000439235 ZNF471Q9BX82 626 aaPredicted RBP16.1■□□□□ 0.17
CHD3-204ENST00000439235 PARD6GQ9BYG4 376 aaPredicted RBP16.1■□□□□ 0.17
CHD3-204ENST00000439235 GAR1Q9NY12 217 aaKnown RBP16.1■□□□□ 0.17
CHD3-204ENST00000439235 WDR83OSQ9Y284 106 aa16.1■□□□□ 0.17
CHD3-204ENST00000439235 RPLP1P05386 114 aaKnown RBP16.09■□□□□ 0.17
CHD3-204ENST00000439235 FCGR2BP31994 310 aaPredicted RBP16.09■□□□□ 0.17
CHD3-204ENST00000439235 Q56UQ5 140 aa16.09■□□□□ 0.17
CHD3-204ENST00000439235 FAM209BQ5JX69 171 aa16.09■□□□□ 0.17
CHD3-204ENST00000439235 RPL7L1Q6DKI1 246 aaKnown RBP16.09■□□□□ 0.17
CHD3-204ENST00000439235 LCNL1Q6ZST4 164 aa16.09■□□□□ 0.17
CHD3-204ENST00000439235 ZNF502Q8TBZ5 544 aa16.09■□□□□ 0.17
CHD3-204ENST00000439235 SCGB1C1Q8TD33 95 aa16.09■□□□□ 0.17
CHD3-204ENST00000439235 MYOZ3Q8TDC0 251 aa16.09■□□□□ 0.17
CHD3-204ENST00000439235 NPIPB3Q92617 1050 aa16.09■□□□□ 0.17
CHD3-204ENST00000439235 HAX1O00165 279 aa16.08■□□□□ 0.16
CHD3-204ENST00000439235 GNG7O60262 68 aa16.08■□□□□ 0.16
CHD3-204ENST00000439235 MPDU1O75352 247 aa16.08■□□□□ 0.16
CHD3-204ENST00000439235 CLN5O75503 358 aa16.08■□□□□ 0.16
CHD3-204ENST00000439235 FGF7P21781 194 aa16.08■□□□□ 0.16
CHD3-204ENST00000439235 RAB31Q13636 194 aa16.08■□□□□ 0.16
CHD3-204ENST00000439235 TEPPQ6URK8 271 aa16.08■□□□□ 0.16
CHD3-204ENST00000439235 TREML4Q6UXN2 200 aa16.08■□□□□ 0.16
CHD3-204ENST00000439235 UBAC2Q8NBM4 344 aa16.08■□□□□ 0.16
CHD3-204ENST00000439235 WDR61Q9GZS3 305 aaKnown RBP16.08■□□□□ 0.16
CHD3-204ENST00000439235 CYTL1Q9NRR1 136 aa16.08■□□□□ 0.16
CHD3-204ENST00000439235 MRPL36Q9P0J6 103 aaKnown RBP16.08■□□□□ 0.16
CHD3-204ENST00000439235 S4R3C0 116 aa16.08■□□□□ 0.16
CHD3-204ENST00000439235 TRAV30A0A087WSZ9 112 aa16.07■□□□□ 0.16
CHD3-204ENST00000439235 BTNL8Q6UX41 500 aa16.07■□□□□ 0.16
CHD3-204ENST00000439235 SLC51BQ86UW2 128 aa16.07■□□□□ 0.16
CHD3-204ENST00000439235 PRIMA1Q86XR5 153 aa16.07■□□□□ 0.16
CHD3-204ENST00000439235 ZNF491Q8N8L2 437 aa16.07■□□□□ 0.16
CHD3-204ENST00000439235 THAP8Q8NA92 274 aa16.07■□□□□ 0.16
CHD3-204ENST00000439235 UBE2E2Q96LR5 201 aa16.07■□□□□ 0.16
CHD3-204ENST00000439235 BOLA1Q9Y3E2 137 aa16.07■□□□□ 0.16
CHD3-204ENST00000439235 ZFP92A6NM28 416 aa16.06■□□□□ 0.16
CHD3-204ENST00000439235 IGHV3-23P01764 117 aa16.06■□□□□ 0.16
CHD3-204ENST00000439235 TPT1P13693 172 aaKnown RBP16.06■□□□□ 0.16
CHD3-204ENST00000439235 CCDC140Q96MF4 163 aa16.06■□□□□ 0.16
CHD3-204ENST00000439235 LSM4Q9Y4Z0 139 aaKnown RBP16.06■□□□□ 0.16
CHD3-204ENST00000439235 IGHV3-11P01762 117 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms