RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 OR52E5Q8NH55 327 aa10.13□□□□□ -0.79
TCOF1-205ENST00000439160 SFRP2Q96HF1 295 aa10.13□□□□□ -0.79
TCOF1-205ENST00000439160 IGHV3-11P01762 117 aa10.13□□□□□ -0.79
TCOF1-205ENST00000439160 ZNF25P17030 456 aaPredicted RBP10.13□□□□□ -0.79
TCOF1-205ENST00000439160 FAM53AQ6NSI3 398 aaPredicted RBP10.13□□□□□ -0.79
TCOF1-205ENST00000439160 WDR83OSQ9Y284 106 aa10.13□□□□□ -0.79
TCOF1-205ENST00000439160 ADAMTS9Q9P2N4 1935 aa10.13□□□□□ -0.79
TCOF1-205ENST00000439160 CCDC168Q8NDH2 2452 aa10.13□□□□□ -0.79
TCOF1-205ENST00000439160 FGF16O43320 207 aa10.13□□□□□ -0.79
TCOF1-205ENST00000439160 LEMD1Q68G75 181 aa10.13□□□□□ -0.79
TCOF1-205ENST00000439160 TEX50A0A1B0GTY4 177 aa10.13□□□□□ -0.79
TCOF1-205ENST00000439160 LOC389332A0A1B0GUA5 103 aa10.13□□□□□ -0.79
TCOF1-205ENST00000439160 CEACAM8P31997 349 aaPredicted RBP10.13□□□□□ -0.79
TCOF1-205ENST00000439160 CD69Q07108 199 aa10.13□□□□□ -0.79
TCOF1-205ENST00000439160 TWIST1Q15672 202 aa10.13□□□□□ -0.79
TCOF1-205ENST00000439160 ZNRD1Q9P1U0 126 aa10.13□□□□□ -0.79
TCOF1-205ENST00000439160 SLC17A3O00476 420 aa10.12□□□□□ -0.79
TCOF1-205ENST00000439160 CCKARP32238 428 aa10.12□□□□□ -0.79
TCOF1-205ENST00000439160 ELOBQ15370 118 aa10.12□□□□□ -0.79
TCOF1-205ENST00000439160 TMEM183BQ1AE95 376 aa10.12□□□□□ -0.79
TCOF1-205ENST00000439160 Q6ZS49 121 aa10.12□□□□□ -0.79
TCOF1-205ENST00000439160 VN1R17PQ8TDU5 208 aa10.12□□□□□ -0.79
TCOF1-205ENST00000439160 LIME1Q9H400 295 aa10.12□□□□□ -0.79
TCOF1-205ENST00000439160 C1QTNF9BB2RNN3 333 aa10.12□□□□□ -0.79
TCOF1-205ENST00000439160 C1QTNF9P0C862 333 aa10.12□□□□□ -0.79
TCOF1-205ENST00000439160 EFNA4P52798 201 aa10.12□□□□□ -0.79
TCOF1-205ENST00000439160 CLEC19AQ6UXS0 136 aa10.12□□□□□ -0.79
TCOF1-205ENST00000439160 LINC00527Q9UJ94 153 aa10.12□□□□□ -0.79
TCOF1-205ENST00000439160 TRAV40A0A0B4J280 105 aa10.12□□□□□ -0.79
TCOF1-205ENST00000439160 DLX6P56179 175 aa10.12□□□□□ -0.79
TCOF1-205ENST00000439160 TBX15Q96SF7 602 aa10.12□□□□□ -0.79
TCOF1-205ENST00000439160 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.11□□□□□ -0.79
TCOF1-205ENST00000439160 DDTP30046 118 aa10.11□□□□□ -0.79
TCOF1-205ENST00000439160 RELQ04864 619 aaPredicted RBP10.11□□□□□ -0.79
TCOF1-205ENST00000439160 EBLN2Q6P2I7 272 aa10.11□□□□□ -0.79
TCOF1-205ENST00000439160 MBNL3Q9NUK0 354 aaKnown RBP10.11□□□□□ -0.79
TCOF1-205ENST00000439160 MT-ND6P03923 174 aa10.11□□□□□ -0.79
TCOF1-205ENST00000439160 GPX4P36969 197 aaPredicted RBP10.11□□□□□ -0.79
TCOF1-205ENST00000439160 MRPL18Q9H0U6 180 aaKnown RBP10.11□□□□□ -0.79
TCOF1-205ENST00000439160 TREML4Q6UXN2 200 aa10.11□□□□□ -0.79
TCOF1-205ENST00000439160 TEX45Q8NA69 505 aa10.11□□□□□ -0.79
TCOF1-205ENST00000439160 VPS25Q9BRG1 176 aa10.11□□□□□ -0.79
TCOF1-205ENST00000439160 BET1LQ9NYM9 111 aa10.11□□□□□ -0.79
TCOF1-205ENST00000439160 FOXI3A8MTJ6 420 aaPredicted RBP10.11□□□□□ -0.79
TCOF1-205ENST00000439160 PTTG1IPP53801 180 aa10.11□□□□□ -0.79
TCOF1-205ENST00000439160 TMEM116Q8NCL8 245 aa10.11□□□□□ -0.79
TCOF1-205ENST00000439160 A0A1B0GV90 55 aa10.1□□□□□ -0.79
TCOF1-205ENST00000439160 WIPF3A6NGB9 483 aa10.1□□□□□ -0.79
TCOF1-205ENST00000439160 PSG9Q00887 426 aa10.1□□□□□ -0.79
TCOF1-205ENST00000439160 DUX4L9Q6RFH8 374 aaPredicted RBP10.1□□□□□ -0.79
TCOF1-205ENST00000439160 TNFRSF14Q92956 283 aa10.1□□□□□ -0.79
TCOF1-205ENST00000439160 NEU1Q99519 415 aa10.1□□□□□ -0.79
TCOF1-205ENST00000439160 VENTXO95231 258 aa10.1□□□□□ -0.79
TCOF1-205ENST00000439160 IGKV3-20P01619 116 aa10.1□□□□□ -0.79
TCOF1-205ENST00000439160 IGKV1-16P04430 117 aa10.1□□□□□ -0.79
TCOF1-205ENST00000439160 PYYP10082 97 aa10.1□□□□□ -0.79
TCOF1-205ENST00000439160 RNF166Q96A37 237 aaPredicted RBP10.1□□□□□ -0.79
TCOF1-205ENST00000439160 GRIFINA4D1Z8 144 aa10.1□□□□□ -0.79
TCOF1-205ENST00000439160 HLA-DQA1P01909 254 aa10.1□□□□□ -0.79
TCOF1-205ENST00000439160 CBLN1P23435 193 aa10.1□□□□□ -0.79
TCOF1-205ENST00000439160 ZNF585BQ52M93 769 aa10.1□□□□□ -0.79
TCOF1-205ENST00000439160 KIR3DL3Q8N743 410 aa10.1□□□□□ -0.79
TCOF1-205ENST00000439160 SIAH2O43255 324 aa10.1□□□□□ -0.79
TCOF1-205ENST00000439160 ANOS1P23352 680 aa10.1□□□□□ -0.79
TCOF1-205ENST00000439160 EFNB3Q15768 340 aa10.1□□□□□ -0.79
TCOF1-205ENST00000439160 LHFPL4Q7Z7J7 247 aa10.1□□□□□ -0.79
TCOF1-205ENST00000439160 OR8A1Q8NGG7 326 aa10.1□□□□□ -0.79
TCOF1-205ENST00000439160 BRCA2P51587 3418 aa10.1□□□□□ -0.79
TCOF1-205ENST00000439160 IGHV1-3A0A0C4DH29 117 aa10.09□□□□□ -0.79
TCOF1-205ENST00000439160 IGLV3-1P01715 115 aa10.09□□□□□ -0.79
TCOF1-205ENST00000439160 RAB9AP51151 201 aa10.09□□□□□ -0.79
TCOF1-205ENST00000439160 OR1P1Q8NH06 330 aa10.09□□□□□ -0.79
TCOF1-205ENST00000439160 PCNX3Q9H6A9 2034 aa10.09□□□□□ -0.79
TCOF1-205ENST00000439160 PGPEP1LA6NFU8 196 aa10.09□□□□□ -0.79
TCOF1-205ENST00000439160 PEX7O00628 323 aa10.09□□□□□ -0.79
TCOF1-205ENST00000439160 WNT2P09544 360 aa10.09□□□□□ -0.79
TCOF1-205ENST00000439160 C21orf62-AS1Q17RA5 79 aa10.09□□□□□ -0.79
TCOF1-205ENST00000439160 DGAT2L7PQ6IED9 249 aa10.09□□□□□ -0.79
TCOF1-205ENST00000439160 Q6ZN92 141 aa10.09□□□□□ -0.79
TCOF1-205ENST00000439160 SLC25A48Q6ZT89 311 aaKnown RBP10.09□□□□□ -0.79
TCOF1-205ENST00000439160 HSPB9Q9BQS6 159 aa10.09□□□□□ -0.79
TCOF1-205ENST00000439160 TMEM191AQ9H0A3 160 aa10.09□□□□□ -0.79
TCOF1-205ENST00000439160 DMRT1Q9Y5R6 373 aa10.09□□□□□ -0.79
TCOF1-205ENST00000439160 PRB4P10163 310 aaPredicted RBP10.09□□□□□ -0.79
TCOF1-205ENST00000439160 RPP25LQ8N5L8 163 aaKnown RBP10.09□□□□□ -0.79
TCOF1-205ENST00000439160 SDF2L1Q9HCN8 221 aa10.09□□□□□ -0.79
TCOF1-205ENST00000439160 CBY3A6NI87 242 aa10.08□□□□□ -0.8
TCOF1-205ENST00000439160 FAM90A9PA6NNJ1 464 aa10.08□□□□□ -0.8
TCOF1-205ENST00000439160 COLCA2A8K830 154 aa10.08□□□□□ -0.8
TCOF1-205ENST00000439160 IGLV1-44P01699 117 aa10.08□□□□□ -0.8
TCOF1-205ENST00000439160 SRIP30626 198 aa10.08□□□□□ -0.8
TCOF1-205ENST00000439160 PRSS8Q16651 343 aa10.08□□□□□ -0.8
TCOF1-205ENST00000439160 TMEM14EPQ6UXP3 125 aa10.08□□□□□ -0.8
TCOF1-205ENST00000439160 SPRY4Q9C004 299 aa10.08□□□□□ -0.8
TCOF1-205ENST00000439160 LMO1P25800 156 aa10.08□□□□□ -0.8
TCOF1-205ENST00000439160 CX3CL1P78423 397 aa10.08□□□□□ -0.8
TCOF1-205ENST00000439160 RELBQ01201 579 aa10.08□□□□□ -0.8
TCOF1-205ENST00000439160 KLF17Q5JT82 389 aaPredicted RBP10.08□□□□□ -0.8
TCOF1-205ENST00000439160 TMEM219Q86XT9 240 aa10.08□□□□□ -0.8
TCOF1-205ENST00000439160 ELOVL1Q9BW60 279 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms