RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 NOL4LQ96MY1 436 aaPredicted RBP5.5□□□□□ -1.53
LSM3P3-201ENST00000436601 SMIM3Q9BZL3 60 aa5.5□□□□□ -1.53
LSM3P3-201ENST00000436601 PRSS22Q9GZN4 317 aa5.5□□□□□ -1.53
LSM3P3-201ENST00000436601 NPFFR1Q9GZQ6 430 aa5.5□□□□□ -1.53
LSM3P3-201ENST00000436601 ARL6Q9H0F7 186 aa5.5□□□□□ -1.53
LSM3P3-201ENST00000436601 ZC4H2Q9NQZ6 224 aa5.5□□□□□ -1.53
LSM3P3-201ENST00000436601 FBXL17Q9UF56 701 aa5.5□□□□□ -1.53
LSM3P3-201ENST00000436601 KLK9Q9UKQ9 250 aa5.5□□□□□ -1.53
LSM3P3-201ENST00000436601 DOCK11Q5JSL3 2073 aa5.5□□□□□ -1.53
LSM3P3-201ENST00000436601 BAHCC1Q9P281 2608 aa5.5□□□□□ -1.53
LSM3P3-201ENST00000436601 IGLV11-55A0A075B6I3 123 aa5.49□□□□□ -1.53
LSM3P3-201ENST00000436601 AP4M1O00189 453 aa5.49□□□□□ -1.53
LSM3P3-201ENST00000436601 TAAR5O14804 337 aa5.49□□□□□ -1.53
LSM3P3-201ENST00000436601 BCL2L11O43521 198 aa5.49□□□□□ -1.53
LSM3P3-201ENST00000436601 IFNA4P05014 189 aa5.49□□□□□ -1.53
LSM3P3-201ENST00000436601 MDKP21741 143 aaPredicted RBP5.49□□□□□ -1.53
LSM3P3-201ENST00000436601 RAB11AP62491 216 aa5.49□□□□□ -1.53
LSM3P3-201ENST00000436601 CFHR3Q02985 330 aa5.49□□□□□ -1.53
LSM3P3-201ENST00000436601 SLC38A11Q08AI6 406 aa5.49□□□□□ -1.53
LSM3P3-201ENST00000436601 CLINT1Q14677 625 aa5.49□□□□□ -1.53
LSM3P3-201ENST00000436601 VWC2Q2TAL6 325 aa5.49□□□□□ -1.53
LSM3P3-201ENST00000436601 SLC25A24Q6NUK1 477 aa5.49□□□□□ -1.53
LSM3P3-201ENST00000436601 OR1S2Q8NGQ3 325 aa5.49□□□□□ -1.53
LSM3P3-201ENST00000436601 FAM110DQ8TAY7 271 aaPredicted RBP5.49□□□□□ -1.53
LSM3P3-201ENST00000436601 RNASEH2CQ8TDP1 164 aaKnown RBP5.49□□□□□ -1.53
LSM3P3-201ENST00000436601 FNDC4Q9H6D8 234 aaPredicted RBP5.49□□□□□ -1.53
LSM3P3-201ENST00000436601 SERTAD4Q9NUC0 356 aa5.49□□□□□ -1.53
LSM3P3-201ENST00000436601 ZNF580Q9UK33 172 aa5.49□□□□□ -1.53
LSM3P3-201ENST00000436601 VPS13CQ709C8 3753 aa5.49□□□□□ -1.53
LSM3P3-201ENST00000436601 TRBV9A0A0B4J1U6 114 aa5.48□□□□□ -1.53
LSM3P3-201ENST00000436601 KANTRA0A1W2PQU2 76 aa5.48□□□□□ -1.53
LSM3P3-201ENST00000436601 I3L2K1 104 aa5.48□□□□□ -1.53
LSM3P3-201ENST00000436601 K7EIM0 57 aa5.48□□□□□ -1.53
LSM3P3-201ENST00000436601 TSPAN9O75954 239 aa5.48□□□□□ -1.53
LSM3P3-201ENST00000436601 SCAF4O95104 1147 aaKnown RBP5.48□□□□□ -1.53
LSM3P3-201ENST00000436601 NDUFB8O95169 186 aa5.48□□□□□ -1.53
LSM3P3-201ENST00000436601 IGHV3-48P01763 117 aa5.48□□□□□ -1.53
LSM3P3-201ENST00000436601 DEFA4P12838 97 aa5.48□□□□□ -1.53
LSM3P3-201ENST00000436601 GPX4P36969 197 aaPredicted RBP5.48□□□□□ -1.53
LSM3P3-201ENST00000436601 HBG1P69891 147 aa5.48□□□□□ -1.53
LSM3P3-201ENST00000436601 HBG2P69892 147 aa5.48□□□□□ -1.53
LSM3P3-201ENST00000436601 DLK1P80370 383 aa5.48□□□□□ -1.53
LSM3P3-201ENST00000436601 FOXL1Q12952 345 aa5.48□□□□□ -1.53
LSM3P3-201ENST00000436601 GAMTQ14353 236 aa5.48□□□□□ -1.53
LSM3P3-201ENST00000436601 ATP6V1FQ16864 119 aa5.48□□□□□ -1.53
LSM3P3-201ENST00000436601 RPL7L1Q6DKI1 246 aaKnown RBP5.48□□□□□ -1.53
LSM3P3-201ENST00000436601 Q6ZSV7 163 aa5.48□□□□□ -1.53
LSM3P3-201ENST00000436601 OR1L6Q8NGR2 347 aa5.48□□□□□ -1.53
LSM3P3-201ENST00000436601 OR2T6Q8NHC8 308 aa5.48□□□□□ -1.53
LSM3P3-201ENST00000436601 PINX1Q96BK5 328 aaKnown RBP5.48□□□□□ -1.53
LSM3P3-201ENST00000436601 NEU1Q99519 415 aa5.48□□□□□ -1.53
LSM3P3-201ENST00000436601 ATP5SQ99766 215 aa5.48□□□□□ -1.53
LSM3P3-201ENST00000436601 GGACTQ9BVM4 153 aa5.48□□□□□ -1.53
LSM3P3-201ENST00000436601 ARV1Q9H2C2 271 aa5.48□□□□□ -1.53
LSM3P3-201ENST00000436601 MRPL36Q9P0J6 103 aaKnown RBP5.48□□□□□ -1.53
LSM3P3-201ENST00000436601 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.48□□□□□ -1.53
LSM3P3-201ENST00000436601 NOTCH2Q04721 2471 aa5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 ZANQ9Y493 2812 aa5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 IGHV3-21A0A0B4J1V1 117 aa5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 CORTO00230 105 aa5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 TCF21O43680 179 aa5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 TRIAP1O43715 76 aa5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 OR2J3O76001 311 aa5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 DFFBO76075 338 aa5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 BRI3O95415 125 aa5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 MT-CO2P00403 227 aa5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 OPRK1P41145 380 aa5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 RPL15P61313 204 aaKnown RBP5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 DEFA5Q01523 94 aa5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 CFAP161Q6P656 301 aa5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 C10orf99Q6UWK7 81 aa5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 SLC16A13Q7RTY0 426 aa5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 ZNF329Q86UD4 541 aa5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 SLC51BQ86UW2 128 aa5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 UBAC2Q8NBM4 344 aa5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 SCARB1Q8WTV0 552 aa5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 CACNG8Q8WXS5 425 aa5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 MS4A10Q96PG2 267 aa5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 TMEM147Q9BVK8 224 aa5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 ZNF471Q9BX82 626 aaPredicted RBP5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 KLK15Q9H2R5 256 aa5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 C16orf95Q9H693 158 aa5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 ZNF355PQ9NSJ1 428 aa5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 UQCC1Q9NVA1 299 aa5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 WDR83OSQ9Y284 106 aa5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 RFNGQ9Y644 331 aa5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 S4R3C0 116 aa5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 FLNAP21333 2647 aaKnown RBP5.47□□□□□ -1.53
LSM3P3-201ENST00000436601 ABCA1O95477 2261 aa5.46□□□□□ -1.53
LSM3P3-201ENST00000436601 AKAP9Q99996 3911 aa5.46□□□□□ -1.53
LSM3P3-201ENST00000436601 MYO9AB2RTY4 2548 aa5.46□□□□□ -1.53
LSM3P3-201ENST00000436601 CREBBPQ92793 2442 aa5.46□□□□□ -1.53
LSM3P3-201ENST00000436601 MAP1AP78559 2803 aaPredicted RBP5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 IGKV1OR2-108A0A075B7D4 117 aa5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 BORCS7-ASMTA0A0B4J1R7 106 aa5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 UBE2L5PA0A1B0GUS4 154 aa5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 MFSD2BA6NFX1 497 aa5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 NPIPB6E9PJ23 425 aa5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 FNDC10F2Z333 226 aa5.46□□□□□ -1.54
LSM3P3-201ENST00000436601 H3BUA1 57 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms