RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 OR10C1Q96KK4 312 aa5.72□□□□□ -1.49
VPS50-203ENST00000436177 METTL26Q96S19 204 aa5.72□□□□□ -1.49
VPS50-203ENST00000436177 C11orf68Q9H3H3 251 aaKnown RBP5.72□□□□□ -1.49
VPS50-203ENST00000436177 COMMD3Q9UBI1 195 aa5.72□□□□□ -1.49
VPS50-203ENST00000436177 A0A087WXM4 84 aa5.71□□□□□ -1.5
VPS50-203ENST00000436177 A0A1W2PS18 150 aa5.71□□□□□ -1.5
VPS50-203ENST00000436177 FAM25AB3EWG3 89 aa5.71□□□□□ -1.5
VPS50-203ENST00000436177 FAM25CB3EWG5 89 aa5.71□□□□□ -1.5
VPS50-203ENST00000436177 FAM25GB3EWG6 89 aa5.71□□□□□ -1.5
VPS50-203ENST00000436177 DFFBO76075 338 aa5.71□□□□□ -1.5
VPS50-203ENST00000436177 NPPCP23582 126 aa5.71□□□□□ -1.5
VPS50-203ENST00000436177 RPS19P39019 145 aaKnown RBP5.71□□□□□ -1.5
VPS50-203ENST00000436177 DEFB131AP59861 70 aa5.71□□□□□ -1.5
VPS50-203ENST00000436177 KRTAP19-4Q3LI73 84 aa5.71□□□□□ -1.5
VPS50-203ENST00000436177 SPINK9Q5DT21 86 aa5.71□□□□□ -1.5
VPS50-203ENST00000436177 RNASE12Q5GAN4 147 aaKnown RBP5.71□□□□□ -1.5
VPS50-203ENST00000436177 ZNF600Q6ZNG1 722 aa5.71□□□□□ -1.5
VPS50-203ENST00000436177 RPP25LQ8N5L8 163 aaKnown RBP5.71□□□□□ -1.5
VPS50-203ENST00000436177 STXBP6Q8NFX7 210 aa5.71□□□□□ -1.5
VPS50-203ENST00000436177 GPX8Q8TED1 209 aa5.71□□□□□ -1.5
VPS50-203ENST00000436177 C2CD4CQ8TF44 421 aa5.71□□□□□ -1.5
VPS50-203ENST00000436177 SEC22AQ96IW7 307 aa5.71□□□□□ -1.5
VPS50-203ENST00000436177 COPZ2Q9P299 210 aa5.71□□□□□ -1.5
VPS50-203ENST00000436177 PUS1Q9Y606 427 aaKnown RBP eCLIP5.71□□□□□ -1.5
VPS50-203ENST00000436177 TRAV2A0A0B4J234 112 aa5.7□□□□□ -1.5
VPS50-203ENST00000436177 IGHV3-66A0A0C4DH42 116 aa5.7□□□□□ -1.5
VPS50-203ENST00000436177 RPS10-NUDT3A0A1W2PQS6 291 aa5.7□□□□□ -1.5
VPS50-203ENST00000436177 M0QYG6 137 aa5.7□□□□□ -1.5
VPS50-203ENST00000436177 DEDDO75618 318 aa5.7□□□□□ -1.5
VPS50-203ENST00000436177 TNFAIP8O95379 198 aa5.7□□□□□ -1.5
VPS50-203ENST00000436177 TBPP20226 339 aa5.7□□□□□ -1.5
VPS50-203ENST00000436177 TGFBR1P36897 503 aa5.7□□□□□ -1.5
VPS50-203ENST00000436177 OPRK1P41145 380 aa5.7□□□□□ -1.5
VPS50-203ENST00000436177 UCP3P55916 312 aa5.7□□□□□ -1.5
VPS50-203ENST00000436177 TCTAP57738 103 aa5.7□□□□□ -1.5
VPS50-203ENST00000436177 NANOS2P60321 138 aaKnown RBP5.7□□□□□ -1.5
VPS50-203ENST00000436177 TMEM41BQ5BJD5 291 aa5.7□□□□□ -1.5
VPS50-203ENST00000436177 LEMD1Q68G75 181 aa5.7□□□□□ -1.5
VPS50-203ENST00000436177 LGALS9CQ6DKI2 356 aa5.7□□□□□ -1.5
VPS50-203ENST00000436177 MZT2AQ6P582 158 aa5.7□□□□□ -1.5
VPS50-203ENST00000436177 TOMM20LQ6UXN7 152 aa5.7□□□□□ -1.5
VPS50-203ENST00000436177 LYSMD2Q8IV50 215 aa5.7□□□□□ -1.5
VPS50-203ENST00000436177 CCDC71LQ8N9Z2 235 aa5.7□□□□□ -1.5
VPS50-203ENST00000436177 ST8SIA2Q92186 375 aa5.7□□□□□ -1.5
VPS50-203ENST00000436177 AP3S1Q92572 193 aa5.7□□□□□ -1.5
VPS50-203ENST00000436177 TMEM230Q96A57 120 aa5.7□□□□□ -1.5
VPS50-203ENST00000436177 ZNF486Q96H40 463 aaPredicted RBP5.7□□□□□ -1.5
VPS50-203ENST00000436177 MS4A6AQ9H2W1 248 aa5.7□□□□□ -1.5
VPS50-203ENST00000436177 HYDINQ4G0P3 5121 aa5.7□□□□□ -1.5
VPS50-203ENST00000436177 DEFB4AO15263 64 aa5.69□□□□□ -1.5
VPS50-203ENST00000436177 PI3P19957 117 aa5.69□□□□□ -1.5
VPS50-203ENST00000436177 PPP5CP53041 499 aa5.69□□□□□ -1.5
VPS50-203ENST00000436177 PIGPP57054 158 aa5.69□□□□□ -1.5
VPS50-203ENST00000436177 RND3P61587 244 aa5.69□□□□□ -1.5
VPS50-203ENST00000436177 IZUMO4Q1ZYL8 232 aa5.69□□□□□ -1.5
VPS50-203ENST00000436177 SCGB2B2Q4G0G5 96 aa5.69□□□□□ -1.5
VPS50-203ENST00000436177 ARRDC1Q8N5I2 433 aa5.69□□□□□ -1.5
VPS50-203ENST00000436177 ZFAND1Q8TCF1 268 aa5.69□□□□□ -1.5
VPS50-203ENST00000436177 C15orf40Q8WUR7 153 aa5.69□□□□□ -1.5
VPS50-203ENST00000436177 YIPF6Q96EC8 236 aa5.69□□□□□ -1.5
VPS50-203ENST00000436177 ZNF414Q96IQ9 312 aa5.69□□□□□ -1.5
VPS50-203ENST00000436177 VSIRQ9H7M9 311 aa5.69□□□□□ -1.5
VPS50-203ENST00000436177 TRAV30A0A087WSZ9 112 aa5.68□□□□□ -1.5
VPS50-203ENST00000436177 C3orf85A0A1B0GTC6 90 aa5.68□□□□□ -1.5
VPS50-203ENST00000436177 HELTA6NFD8 242 aa5.68□□□□□ -1.5
VPS50-203ENST00000436177 IGLL5B9A064 214 aa5.68□□□□□ -1.5
VPS50-203ENST00000436177 C11orf94C9JXX5 98 aa5.68□□□□□ -1.5
VPS50-203ENST00000436177 HPGDSO60760 199 aa5.68□□□□□ -1.5
VPS50-203ENST00000436177 B3GALNT1O75752 331 aa5.68□□□□□ -1.5
VPS50-203ENST00000436177 IGKV1-39P01597 117 aa5.68□□□□□ -1.5
VPS50-203ENST00000436177 IGKV1D-39P04432 117 aa5.68□□□□□ -1.5
VPS50-203ENST00000436177 ZNF688P0C7X2 276 aa5.68□□□□□ -1.5
VPS50-203ENST00000436177 SPP1P10451 314 aa5.68□□□□□ -1.5
VPS50-203ENST00000436177 P2RY1P47900 373 aa5.68□□□□□ -1.5
VPS50-203ENST00000436177 RORCP51449 518 aa5.68□□□□□ -1.5
VPS50-203ENST00000436177 VBP1P61758 197 aa5.68□□□□□ -1.5
VPS50-203ENST00000436177 NCS1P62166 190 aa5.68□□□□□ -1.5
VPS50-203ENST00000436177 ACTL10Q5JWF8 245 aa5.68□□□□□ -1.5
VPS50-203ENST00000436177 FAM90A2PQ658T7 463 aa5.68□□□□□ -1.5
VPS50-203ENST00000436177 MORN3Q6PF18 240 aaPredicted RBP5.68□□□□□ -1.5
VPS50-203ENST00000436177 HEYLQ9NQ87 328 aaPredicted RBP5.68□□□□□ -1.5
VPS50-203ENST00000436177 C14orf166Q9Y224 244 aaKnown RBP5.68□□□□□ -1.5
VPS50-203ENST00000436177 A0A0B4J293 547 aa5.67□□□□□ -1.5
VPS50-203ENST00000436177 IGHV4-28A0A0C4DH34 117 aa5.67□□□□□ -1.5
VPS50-203ENST00000436177 TEX13DA0A0J9YY54 714 aaPredicted RBP5.67□□□□□ -1.5
VPS50-203ENST00000436177 CEBPZOSA8MTT3 80 aa5.67□□□□□ -1.5
VPS50-203ENST00000436177 CLN5O75503 358 aa5.67□□□□□ -1.5
VPS50-203ENST00000436177 RAB3DO95716 219 aa5.67□□□□□ -1.5
VPS50-203ENST00000436177 TMEM50AO95807 157 aa5.67□□□□□ -1.5
VPS50-203ENST00000436177 IGKV1-5P01602 117 aa5.67□□□□□ -1.5
VPS50-203ENST00000436177 APOHP02749 345 aaPredicted RBP5.67□□□□□ -1.5
VPS50-203ENST00000436177 CD3DP04234 171 aa5.67□□□□□ -1.5
VPS50-203ENST00000436177 RNASE2P10153 161 aaKnown RBP5.67□□□□□ -1.5
VPS50-203ENST00000436177 MIFP14174 115 aa5.67□□□□□ -1.5
VPS50-203ENST00000436177 ELK1P19419 428 aa5.67□□□□□ -1.5
VPS50-203ENST00000436177 ETV6P41212 452 aa5.67□□□□□ -1.5
VPS50-203ENST00000436177 HTR2BP41595 481 aa5.67□□□□□ -1.5
VPS50-203ENST00000436177 SPCS3P61009 180 aa5.67□□□□□ -1.5
VPS50-203ENST00000436177 NUTF2P61970 127 aaKnown RBP5.67□□□□□ -1.5
VPS50-203ENST00000436177 SNRPD3P62318 126 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms