RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 TRAV4A0A0B4J268 109 aa1.19□□□□□ -2.22
PTPN4-205ENST00000433888 IRGMA1A4Y4 181 aa1.19□□□□□ -2.22
PTPN4-205ENST00000433888 ZNF705FA8MVS1 300 aaPredicted RBP1.19□□□□□ -2.22
PTPN4-205ENST00000433888 G3V2T6 193 aa1.19□□□□□ -2.22
PTPN4-205ENST00000433888 CYB5BO43169 146 aa1.19□□□□□ -2.22
PTPN4-205ENST00000433888 ZNF737O75373 536 aa1.19□□□□□ -2.22
PTPN4-205ENST00000433888 OR2B3O76000 313 aa1.19□□□□□ -2.22
PTPN4-205ENST00000433888 S100A4P26447 101 aaKnown RBP1.19□□□□□ -2.22
PTPN4-205ENST00000433888 FKBP2P26885 142 aaKnown RBP1.19□□□□□ -2.22
PTPN4-205ENST00000433888 PSMB8P28062 276 aa1.19□□□□□ -2.22
PTPN4-205ENST00000433888 LINC01554Q52M75 96 aa1.19□□□□□ -2.22
PTPN4-205ENST00000433888 KHDC3LQ587J8 217 aa1.19□□□□□ -2.22
PTPN4-205ENST00000433888 PABPC1L2AQ5JQF8 200 aa1.19□□□□□ -2.22
PTPN4-205ENST00000433888 C3orf33Q6P1S2 294 aa1.19□□□□□ -2.22
PTPN4-205ENST00000433888 LCN15Q6UWW0 184 aa1.19□□□□□ -2.22
PTPN4-205ENST00000433888 ZNF439Q8NDP4 499 aa1.19□□□□□ -2.22
PTPN4-205ENST00000433888 OR13C4Q8NGS5 318 aa1.19□□□□□ -2.22
PTPN4-205ENST00000433888 SPACA4Q8TDM5 124 aa1.19□□□□□ -2.22
PTPN4-205ENST00000433888 FAM172AQ8WUF8 416 aa1.19□□□□□ -2.22
PTPN4-205ENST00000433888 SCGB3A1Q96QR1 104 aa1.19□□□□□ -2.22
PTPN4-205ENST00000433888 TXNDC17Q9BRA2 123 aa1.19□□□□□ -2.22
PTPN4-205ENST00000433888 Q9BRP9 147 aa1.19□□□□□ -2.22
PTPN4-205ENST00000433888 GINS3Q9BRX5 216 aa1.19□□□□□ -2.22
PTPN4-205ENST00000433888 PCBD2Q9H0N5 130 aa1.19□□□□□ -2.22
PTPN4-205ENST00000433888 OSTCQ9NRP0 149 aa1.19□□□□□ -2.22
PTPN4-205ENST00000433888 TVP23BQ9NYZ1 205 aa1.19□□□□□ -2.22
PTPN4-205ENST00000433888 PCTPQ9UKL6 214 aa1.19□□□□□ -2.22
PTPN4-205ENST00000433888 PRNDQ9UKY0 176 aa1.19□□□□□ -2.22
PTPN4-205ENST00000433888 BAIAP2Q9UQB8 552 aa1.19□□□□□ -2.22
PTPN4-205ENST00000433888 MICAL3Q7RTP6 2002 aa1.18□□□□□ -2.22
PTPN4-205ENST00000433888 ZNF532Q9HCE3 1301 aa1.18□□□□□ -2.22
PTPN4-205ENST00000433888 KIF1BO60333 1816 aa1.18□□□□□ -2.22
PTPN4-205ENST00000433888 IGHV3-64A0A075B6Q5 118 aa1.18□□□□□ -2.22
PTPN4-205ENST00000433888 IGKV1-9A0A0C4DH69 117 aa1.18□□□□□ -2.22
PTPN4-205ENST00000433888 ODAMA1E959 279 aa1.18□□□□□ -2.22
PTPN4-205ENST00000433888 TMEM212A6NML5 194 aa1.18□□□□□ -2.22
PTPN4-205ENST00000433888 H0YJX3 145 aa1.18□□□□□ -2.22
PTPN4-205ENST00000433888 C1QBP02746 253 aa1.18□□□□□ -2.22
PTPN4-205ENST00000433888 MSMBP08118 114 aa1.18□□□□□ -2.22
PTPN4-205ENST00000433888 PHBP35232 272 aa1.18□□□□□ -2.22
PTPN4-205ENST00000433888 SPANXN3Q5MJ09 141 aa1.18□□□□□ -2.22
PTPN4-205ENST00000433888 MIR17HGQ75NE6 70 aa1.18□□□□□ -2.22
PTPN4-205ENST00000433888 HIST3H2BBQ8N257 126 aa1.18□□□□□ -2.22
PTPN4-205ENST00000433888 STX19Q8N4C7 294 aa1.18□□□□□ -2.22
PTPN4-205ENST00000433888 RNASE11Q8TAA1 199 aaKnown RBP1.18□□□□□ -2.22
PTPN4-205ENST00000433888 GRPEL2Q8TAA5 225 aa1.18□□□□□ -2.22
PTPN4-205ENST00000433888 DYDC1Q8WWB3 177 aa1.18□□□□□ -2.22
PTPN4-205ENST00000433888 ADAT3Q96EY9 351 aaPredicted RBP1.18□□□□□ -2.22
PTPN4-205ENST00000433888 DNAJC30Q96LL9 226 aa1.18□□□□□ -2.22
PTPN4-205ENST00000433888 CHST6Q9GZX3 395 aa1.18□□□□□ -2.22
PTPN4-205ENST00000433888 XAGE1AQ9HD64 81 aa1.18□□□□□ -2.22
PTPN4-205ENST00000433888 PRO2289Q9P1D8 64 aa1.18□□□□□ -2.22
PTPN4-205ENST00000433888 PSORS1C2Q9UIG4 136 aa1.18□□□□□ -2.22
PTPN4-205ENST00000433888 PYCARDQ9ULZ3 195 aa1.18□□□□□ -2.22
PTPN4-205ENST00000433888 PBRM1Q86U86 1689 aa1.18□□□□□ -2.22
PTPN4-205ENST00000433888 GBF1Q92538 1859 aa1.18□□□□□ -2.22
PTPN4-205ENST00000433888 SCN8AQ9UQD0 1980 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 TRAV1-1A0A0B4J248 108 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 TRBV10-2A0A0K0K1G8 114 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 MEIS3P1A6NDR6 274 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 TAX1BP3O14907 124 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 OR2T1O43869 369 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 NDUFC2O95298 119 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 IFNA10P01566 189 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 PMP2P02689 132 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 C1QAP02745 245 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 PSMD8P48556 350 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 INSL3P51460 131 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 KRTAP12-1P59990 96 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 HIST1H4AP62805 103 aaKnown RBP1.17□□□□□ -2.22
PTPN4-205ENST00000433888 RNASE10Q5GAN6 216 aaKnown RBP1.17□□□□□ -2.22
PTPN4-205ENST00000433888 KIAA2026Q5HYC2 2103 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 AKR1C8PQ5T2L2 129 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 DPPA3Q6W0C5 159 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 SOSTDC1Q6X4U4 206 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 Q6ZTI0 123 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 C7orf65Q6ZTY9 151 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 FAM24BQ8N5W8 94 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 SIGLECL1Q8N7X8 197 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 C9orf163Q8N9P6 203 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 PFN4Q8NHR9 129 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 AQP3Q92482 292 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 GPR146Q96CH1 333 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 PBDC1Q9BVG4 233 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 C20orf27Q9GZN8 174 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 MED11Q9P086 117 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 SSR3Q9UNL2 185 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 V9GYQ6 96 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 DOCK4Q8N1I0 1966 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 RTL1A6NKG5 1358 aa1.17□□□□□ -2.22
PTPN4-205ENST00000433888 COL5A3P25940 1745 aaPredicted RBP1.17□□□□□ -2.22
PTPN4-205ENST00000433888 DENND4BO75064 1496 aaPredicted RBP1.17□□□□□ -2.22
PTPN4-205ENST00000433888 NUMA1Q14980 2115 aa1.16□□□□□ -2.22
PTPN4-205ENST00000433888 ZFHX2Q9C0A1 2572 aaPredicted RBP1.16□□□□□ -2.22
PTPN4-205ENST00000433888 NCOA1Q15788 1441 aa1.16□□□□□ -2.22
PTPN4-205ENST00000433888 MYO5AQ9Y4I1 1855 aaKnown RBP1.16□□□□□ -2.22
PTPN4-205ENST00000433888 UNC13AQ9UPW8 1703 aa1.16□□□□□ -2.22
PTPN4-205ENST00000433888 A0A087X0T9 212 aa1.16□□□□□ -2.22
PTPN4-205ENST00000433888 OR51F1A6NGY5 319 aa1.16□□□□□ -2.22
PTPN4-205ENST00000433888 IBA57-AS1B1ANH7 110 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms