RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 FAM219AQ8IW50 185 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 UXS1Q8NBZ7 420 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 DUSP18Q8NEJ0 188 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 OR1L6Q8NGR2 347 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 OR1P1Q8NH06 330 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 IL22RA2Q969J5 263 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 ASCL2Q99929 193 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 C20orf24Q9BUV8 137 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 HIPK2Q9H2X6 1198 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 RBKSQ9H477 322 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 SHPKQ9UHJ6 478 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 KLK9Q9UKQ9 250 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 IGHV3OR16-13A0A075B7E8 117 aa4.37□□□□□ -1.71
HMGB3P24-201ENST00000433260 IGHV3-49A0A0A0MS15 119 aa4.37□□□□□ -1.71
HMGB3P24-201ENST00000433260 IGHV3-74A0A0B4J1X5 117 aa4.37□□□□□ -1.71
HMGB3P24-201ENST00000433260 C9orf170A2RU37 121 aa4.37□□□□□ -1.71
HMGB3P24-201ENST00000433260 C2orf70A6NJV1 201 aa4.37□□□□□ -1.71
HMGB3P24-201ENST00000433260 LGALS9O00182 355 aa4.37□□□□□ -1.71
HMGB3P24-201ENST00000433260 TMEM50AO95807 157 aa4.37□□□□□ -1.71
HMGB3P24-201ENST00000433260 IFNA10P01566 189 aa4.37□□□□□ -1.71
HMGB3P24-201ENST00000433260 TCRBP04435 133 aa4.37□□□□□ -1.71
HMGB3P24-201ENST00000433260 OR4E1P0C645 316 aa4.37□□□□□ -1.71
HMGB3P24-201ENST00000433260 OPRK1P41145 380 aa4.37□□□□□ -1.71
HMGB3P24-201ENST00000433260 UBE2MP61081 183 aaKnown RBP4.37□□□□□ -1.71
HMGB3P24-201ENST00000433260 ZNF846Q147U1 533 aa4.37□□□□□ -1.71
HMGB3P24-201ENST00000433260 SMCO1Q147U7 214 aa4.37□□□□□ -1.71
HMGB3P24-201ENST00000433260 DEFB114Q30KQ6 69 aa4.37□□□□□ -1.71
HMGB3P24-201ENST00000433260 CD300EQ496F6 205 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P24-201ENST00000433260 GGNBP1Q5YKI7 109 aa4.37□□□□□ -1.71
HMGB3P24-201ENST00000433260 OR52B4Q8NGK2 314 aa4.37□□□□□ -1.71
HMGB3P24-201ENST00000433260 OR52E5Q8NH55 327 aa4.37□□□□□ -1.71
HMGB3P24-201ENST00000433260 DYNLRB2Q8TF09 96 aa4.37□□□□□ -1.71
HMGB3P24-201ENST00000433260 DEDD2Q8WXF8 326 aa4.37□□□□□ -1.71
HMGB3P24-201ENST00000433260 S100ZQ8WXG8 99 aa4.37□□□□□ -1.71
HMGB3P24-201ENST00000433260 C7orf50Q9BRJ6 194 aaKnown RBP4.37□□□□□ -1.71
HMGB3P24-201ENST00000433260 MAGT1Q9H0U3 335 aa4.37□□□□□ -1.71
HMGB3P24-201ENST00000433260 MRPL36Q9P0J6 103 aaKnown RBP4.37□□□□□ -1.71
HMGB3P24-201ENST00000433260 PAIP2BQ9ULR5 123 aaKnown RBP4.37□□□□□ -1.71
HMGB3P24-201ENST00000433260 LSM4Q9Y4Z0 139 aaKnown RBP4.37□□□□□ -1.71
HMGB3P24-201ENST00000433260 FBN3Q75N90 2809 aa4.37□□□□□ -1.71
HMGB3P24-201ENST00000433260 A0A1B0GU03 582 aa4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 FAM240BA0A1B0GVZ2 78 aa4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 ZNF785A8K8V0 405 aa4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 MPTX1A8MV57 137 aa4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 WRBO00258 174 aa4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 NUPL2O15504 423 aaKnown RBP4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 SCAF4O95104 1147 aaKnown RBP4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 MED14OSP0DP75 135 aa4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 IAPPP10997 89 aa4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 HTR2BP41595 481 aa4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 SRPXP78539 464 aa4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 TNFRSF9Q07011 255 aa4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 CD69Q07108 199 aa4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 DHRS2Q13268 280 aa4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 TIGITQ495A1 244 aa4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 NMSQ5H8A3 153 aa4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 RBPMS2Q6ZRY4 209 aaKnown RBP4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 LYG2Q86SG7 212 aa4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 LRTM2Q8N967 370 aa4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 ZNF114Q8NC26 417 aa4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 SLC24A4Q8NFF2 622 aa4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 COQ8AQ8NI60 647 aa4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 DTD1Q8TEA8 209 aa4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 BSCL2Q96G97 398 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 SEC22CQ9BRL7 303 aa4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 CCDC32Q9BV29 185 aa4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 ZNF436Q9C0F3 470 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 FNDC4Q9H6D8 234 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 PALMDQ9NP74 551 aa4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 BATF3Q9NR55 127 aa4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 MRPL27Q9P0M9 148 aaKnown RBP4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 GSKIPQ9P0R6 139 aa4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 MLXQ9UH92 298 aa4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 UFC1Q9Y3C8 167 aa4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 SMAD5-AS1Q9Y6J3 95 aa4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 NOTCH3Q9UM47 2321 aa4.36□□□□□ -1.71
HMGB3P24-201ENST00000433260 IGKV3-7A0A075B6H7 116 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 TRAV14DV4A0A0A6YYC5 116 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 IGHV3-66A0A0C4DH42 116 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 DUXBA0A1W2PPF3 345 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 TMEM213A2RRL7 107 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 INS-IGF2F8WCM5 200 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 CORTO00230 105 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 NDUFA4O00483 81 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 SYNGR2O43760 224 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 PITX3O75364 302 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 CLN5O75503 358 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 IFNA21P01568 189 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 APOHP02749 345 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 IFNA4P05014 189 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 CD7P09564 240 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 NPY1RP25929 384 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 NPBWR1P48145 328 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 IFITM3Q01628 133 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 RELQ04864 619 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 AARDQ4LEZ3 155 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 C2orf83Q53S99 150 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 LCN12Q6JVE5 192 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 SPSB3Q6PJ21 355 aa4.35□□□□□ -1.71
HMGB3P24-201ENST00000433260 C16orf54Q6UWD8 224 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms