RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 DAD1P61803 113 aa10□□□□□ -0.81
HDAC6-206ENST00000426196 MLLT11Q13015 90 aaPredicted RBP10□□□□□ -0.81
HDAC6-206ENST00000426196 PACRGLQ8N7B6 248 aa10□□□□□ -0.81
HDAC6-206ENST00000426196 SCGB2A1O75556 95 aa9.99□□□□□ -0.81
HDAC6-206ENST00000426196 GNRHRP30968 328 aa9.99□□□□□ -0.81
HDAC6-206ENST00000426196 LPAR6P43657 344 aa9.99□□□□□ -0.81
HDAC6-206ENST00000426196 AP2S1P53680 142 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-206ENST00000426196 HERV-K104P61576 105 aa9.99□□□□□ -0.81
HDAC6-206ENST00000426196 ERHP84090 104 aaKnown RBP9.99□□□□□ -0.81
HDAC6-206ENST00000426196 FCAMRQ8WWV6 532 aa9.99□□□□□ -0.81
HDAC6-206ENST00000426196 FRZBQ92765 325 aa9.99□□□□□ -0.81
HDAC6-206ENST00000426196 C18orf15Q96N68 181 aa9.99□□□□□ -0.81
HDAC6-206ENST00000426196 SCN3BQ9NY72 215 aa9.99□□□□□ -0.81
HDAC6-206ENST00000426196 TMEM50AO95807 157 aa9.98□□□□□ -0.81
HDAC6-206ENST00000426196 HLA-DRB4P13762 266 aa9.98□□□□□ -0.81
HDAC6-206ENST00000426196 PPP5CP53041 499 aa9.98□□□□□ -0.81
HDAC6-206ENST00000426196 CCL18P55774 89 aa9.98□□□□□ -0.81
HDAC6-206ENST00000426196 Q5VSD8 79 aa9.98□□□□□ -0.81
HDAC6-206ENST00000426196 TMEM230Q96A57 120 aa9.98□□□□□ -0.81
HDAC6-206ENST00000426196 YTHDF2Q9Y5A9 579 aaKnown RBP9.98□□□□□ -0.81
HDAC6-206ENST00000426196 HLA-DRB4X5D2U9 266 aa9.98□□□□□ -0.81
HDAC6-206ENST00000426196 LOC102723971A0A1B0GUV8 181 aa9.97□□□□□ -0.81
HDAC6-206ENST00000426196 FAM90A26D6RGX4 464 aa9.97□□□□□ -0.81
HDAC6-206ENST00000426196 HBE1P02100 147 aa9.97□□□□□ -0.81
HDAC6-206ENST00000426196 HOXA1P49639 335 aaPredicted RBP9.97□□□□□ -0.81
HDAC6-206ENST00000426196 PRCDQ00LT1 54 aa9.97□□□□□ -0.81
HDAC6-206ENST00000426196 TTC32Q5I0X7 151 aa9.97□□□□□ -0.81
HDAC6-206ENST00000426196 OR4A16Q8NH70 328 aa9.97□□□□□ -0.81
HDAC6-206ENST00000426196 SEPSECSQ9HD40 501 aaKnown RBP9.97□□□□□ -0.81
HDAC6-206ENST00000426196 PTTG2Q9NZH5 202 aa9.97□□□□□ -0.81
HDAC6-206ENST00000426196 DAPK2Q9UIK4 370 aa9.97□□□□□ -0.81
HDAC6-206ENST00000426196 RPS10-NUDT3A0A1W2PQS6 291 aa9.96□□□□□ -0.82
HDAC6-206ENST00000426196 PGLYRP1O75594 196 aaPredicted RBP9.96□□□□□ -0.82
HDAC6-206ENST00000426196 NUDT3O95989 172 aa9.96□□□□□ -0.82
HDAC6-206ENST00000426196 BTF3P20290 206 aaKnown RBP9.96□□□□□ -0.82
HDAC6-206ENST00000426196 ALDH3B2P48448 385 aa9.96□□□□□ -0.82
HDAC6-206ENST00000426196 FXYD7P58549 80 aa9.96□□□□□ -0.82
HDAC6-206ENST00000426196 HOGA1Q86XE5 327 aa9.96□□□□□ -0.82
HDAC6-206ENST00000426196 LYPD1Q8N2G4 141 aa9.96□□□□□ -0.82
HDAC6-206ENST00000426196 GOLT1BQ9Y3E0 138 aa9.96□□□□□ -0.82
HDAC6-206ENST00000426196 IGKV3-20P01619 116 aa9.95□□□□□ -0.82
HDAC6-206ENST00000426196 SNCAP37840 140 aa9.95□□□□□ -0.82
HDAC6-206ENST00000426196 C16orf54Q6UWD8 224 aa9.95□□□□□ -0.82
HDAC6-206ENST00000426196 CMTM1Q8IZ96 169 aa9.95□□□□□ -0.82
HDAC6-206ENST00000426196 LGALS14Q8TCE9 139 aa9.95□□□□□ -0.82
HDAC6-206ENST00000426196 GLMPQ8WWB7 406 aa9.95□□□□□ -0.82
HDAC6-206ENST00000426196 MGLLQ99685 303 aa9.95□□□□□ -0.82
HDAC6-206ENST00000426196 C7orf50Q9BRJ6 194 aaKnown RBP9.95□□□□□ -0.82
HDAC6-206ENST00000426196 NRN1Q9NPD7 142 aa9.95□□□□□ -0.82
HDAC6-206ENST00000426196 CORTO00230 105 aa9.94□□□□□ -0.82
HDAC6-206ENST00000426196 CLN5O75503 358 aa9.94□□□□□ -0.82
HDAC6-206ENST00000426196 NKX2-1P43699 371 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-206ENST00000426196 HSPE1P61604 102 aaKnown RBP9.94□□□□□ -0.82
HDAC6-206ENST00000426196 RRN3P1Q2M238 152 aa9.94□□□□□ -0.82
HDAC6-206ENST00000426196 H2BFWTQ7Z2G1 175 aa9.94□□□□□ -0.82
HDAC6-206ENST00000426196 OR5AP2Q8NGF4 316 aa9.94□□□□□ -0.82
HDAC6-206ENST00000426196 LINC00588Q9Y4M8 146 aa9.94□□□□□ -0.82
HDAC6-206ENST00000426196 UBR4Q5T4S7 5183 aa9.94□□□□□ -0.82
HDAC6-206ENST00000426196 SMIM30A4D0T7 59 aa9.93□□□□□ -0.82
HDAC6-206ENST00000426196 J3QL48 77 aa9.93□□□□□ -0.82
HDAC6-206ENST00000426196 RGS10O43665 173 aa9.93□□□□□ -0.82
HDAC6-206ENST00000426196 FCER2P06734 321 aa9.93□□□□□ -0.82
HDAC6-206ENST00000426196 HNRNPCP07910 306 aaKnown RBP eCLIP9.93□□□□□ -0.82
HDAC6-206ENST00000426196 CLINT1Q14677 625 aa9.93□□□□□ -0.82
HDAC6-206ENST00000426196 TPRKBQ9Y3C4 175 aa9.93□□□□□ -0.82
HDAC6-206ENST00000426196 U3KQE9 123 aa9.93□□□□□ -0.82
HDAC6-206ENST00000426196 NOTOA8MTQ0 251 aa9.92□□□□□ -0.82
HDAC6-206ENST00000426196 OPRK1P41145 380 aa9.92□□□□□ -0.82
HDAC6-206ENST00000426196 SUB1P53999 127 aaKnown RBP eCLIP9.92□□□□□ -0.82
HDAC6-206ENST00000426196 SPINK9Q5DT21 86 aa9.92□□□□□ -0.82
HDAC6-206ENST00000426196 GDF5OSQ5U4N7 250 aa9.92□□□□□ -0.82
HDAC6-206ENST00000426196 ZNF709Q8N972 641 aa9.92□□□□□ -0.82
HDAC6-206ENST00000426196 OR4X1Q8NH49 305 aa9.92□□□□□ -0.82
HDAC6-206ENST00000426196 Q9H8V8 135 aa9.92□□□□□ -0.82
HDAC6-206ENST00000426196 RHBDL2Q9NX52 303 aa9.92□□□□□ -0.82
HDAC6-206ENST00000426196 EHFQ9NZC4 300 aa9.92□□□□□ -0.82
HDAC6-206ENST00000426196 TRAV18A0A075B6X5 111 aa9.91□□□□□ -0.82
HDAC6-206ENST00000426196 TRAV30A0A087WSZ9 112 aa9.91□□□□□ -0.82
HDAC6-206ENST00000426196 F5H768 121 aa9.91□□□□□ -0.82
HDAC6-206ENST00000426196 GPR31O00270 319 aa9.91□□□□□ -0.82
HDAC6-206ENST00000426196 IGKV1-17P01599 117 aa9.91□□□□□ -0.82
HDAC6-206ENST00000426196 TIGITQ495A1 244 aa9.91□□□□□ -0.82
HDAC6-206ENST00000426196 SIGLEC15Q6ZMC9 328 aa9.91□□□□□ -0.82
HDAC6-206ENST00000426196 SSX7Q7RTT5 188 aa9.91□□□□□ -0.82
HDAC6-206ENST00000426196 SLC35G3Q8N808 338 aa9.91□□□□□ -0.82
HDAC6-206ENST00000426196 OR4B1Q8NGF8 309 aa9.91□□□□□ -0.82
HDAC6-206ENST00000426196 SEC22AQ96IW7 307 aa9.91□□□□□ -0.82
HDAC6-206ENST00000426196 MAGT1Q9H0U3 335 aa9.91□□□□□ -0.82
HDAC6-206ENST00000426196 FAM212BQ9NTI7 297 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-206ENST00000426196 MRPL36Q9P0J6 103 aaKnown RBP9.91□□□□□ -0.82
HDAC6-206ENST00000426196 TRDV1A0A1B0GX56 115 aa9.9□□□□□ -0.82
HDAC6-206ENST00000426196 LYRM9A8MSI8 78 aa9.9□□□□□ -0.82
HDAC6-206ENST00000426196 GSTZ1O43708 216 aaPredicted RBP9.9□□□□□ -0.82
HDAC6-206ENST00000426196 S100GP29377 79 aa9.9□□□□□ -0.82
HDAC6-206ENST00000426196 CBX5P45973 191 aa9.9□□□□□ -0.82
HDAC6-206ENST00000426196 XGP55808 180 aa9.9□□□□□ -0.82
HDAC6-206ENST00000426196 DLK1P80370 383 aa9.9□□□□□ -0.82
HDAC6-206ENST00000426196 C22orf42Q6IC83 251 aa9.9□□□□□ -0.82
HDAC6-206ENST00000426196 FOXI2Q6ZQN5 318 aa9.9□□□□□ -0.82
HDAC6-206ENST00000426196 C1orf158Q8N1D5 194 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms