RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 OCC1Q8TAD7 63 aa11.57□□□□□ -0.56
SREBF2-202ENST00000424354 SLC25A2Q9BXI2 301 aa11.57□□□□□ -0.56
SREBF2-202ENST00000424354 TNFRSF18Q9Y5U5 241 aa11.57□□□□□ -0.56
SREBF2-202ENST00000424354 IQCF6A8MYZ5 107 aa11.56□□□□□ -0.56
SREBF2-202ENST00000424354 UPK2O00526 184 aa11.56□□□□□ -0.56
SREBF2-202ENST00000424354 PPBPP02775 128 aa11.56□□□□□ -0.56
SREBF2-202ENST00000424354 OR13C6PQ8NH95 151 aa11.56□□□□□ -0.56
SREBF2-202ENST00000424354 NHP2Q9NX24 153 aaKnown RBP11.56□□□□□ -0.56
SREBF2-202ENST00000424354 EPDR1Q9UM22 224 aa11.56□□□□□ -0.56
SREBF2-202ENST00000424354 FOXA2Q9Y261 457 aaPredicted RBP11.56□□□□□ -0.56
SREBF2-202ENST00000424354 YPEL1O60688 119 aa11.56□□□□□ -0.56
SREBF2-202ENST00000424354 NAPSAO96009 420 aa11.56□□□□□ -0.56
SREBF2-202ENST00000424354 HSD52Q0P140 79 aa11.56□□□□□ -0.56
SREBF2-202ENST00000424354 FOXL1Q12952 345 aa11.56□□□□□ -0.56
SREBF2-202ENST00000424354 LDLRAD2Q5SZI1 272 aa11.56□□□□□ -0.56
SREBF2-202ENST00000424354 YPEL2Q96QA6 119 aa11.56□□□□□ -0.56
SREBF2-202ENST00000424354 C21orf62Q9NYP8 219 aa11.56□□□□□ -0.56
SREBF2-202ENST00000424354 IGKV1-9A0A0C4DH69 117 aa11.56□□□□□ -0.56
SREBF2-202ENST00000424354 DPM2O94777 84 aa11.56□□□□□ -0.56
SREBF2-202ENST00000424354 NDUFA3O95167 84 aa11.56□□□□□ -0.56
SREBF2-202ENST00000424354 PPP1R32Q7Z5V6 425 aa11.56□□□□□ -0.56
SREBF2-202ENST00000424354 DUX5Q96PT3 197 aa11.56□□□□□ -0.56
SREBF2-202ENST00000424354 NXT2Q9NPJ8 142 aaKnown RBP11.56□□□□□ -0.56
SREBF2-202ENST00000424354 MTCL1Q9Y4B5 1905 aaKnown RBP11.56□□□□□ -0.56
SREBF2-202ENST00000424354 PLPPR1Q8TBJ4 325 aa11.56□□□□□ -0.56
SREBF2-202ENST00000424354 WDR83OSQ9Y284 106 aa11.56□□□□□ -0.56
SREBF2-202ENST00000424354 PAX1P15863 534 aa11.55□□□□□ -0.56
SREBF2-202ENST00000424354 OR2K2Q8NGT1 345 aa11.55□□□□□ -0.56
SREBF2-202ENST00000424354 SSBP4Q9BWG4 385 aaPredicted RBP11.55□□□□□ -0.56
SREBF2-202ENST00000424354 ATP5J2P56134 94 aa11.55□□□□□ -0.56
SREBF2-202ENST00000424354 TMEM101Q96IK0 257 aa11.55□□□□□ -0.56
SREBF2-202ENST00000424354 MRPS18CQ9Y3D5 142 aaKnown RBP11.55□□□□□ -0.56
SREBF2-202ENST00000424354 BDP1A6H8Y1 2624 aa11.55□□□□□ -0.56
SREBF2-202ENST00000424354 IGHV3OR16-12A0A075B7B8 117 aa11.55□□□□□ -0.56
SREBF2-202ENST00000424354 TRAV8-2A0A0B4J237 113 aa11.55□□□□□ -0.56
SREBF2-202ENST00000424354 PRR32B1ATL7 298 aa11.55□□□□□ -0.56
SREBF2-202ENST00000424354 LINC01559Q495D7 138 aa11.55□□□□□ -0.56
SREBF2-202ENST00000424354 ATP1A1-AS1Q5TC04 95 aa11.55□□□□□ -0.56
SREBF2-202ENST00000424354 ZNF497Q6ZNH5 498 aa11.55□□□□□ -0.56
SREBF2-202ENST00000424354 LHFPL1Q86WI0 220 aa11.55□□□□□ -0.56
SREBF2-202ENST00000424354 TSKUQ8WUA8 353 aa11.55□□□□□ -0.56
SREBF2-202ENST00000424354 ASCL2Q99929 193 aa11.55□□□□□ -0.56
SREBF2-202ENST00000424354 LINC00312Q9Y6C7 94 aa11.55□□□□□ -0.56
SREBF2-202ENST00000424354 DLEU1O43261 78 aa11.55□□□□□ -0.56
SREBF2-202ENST00000424354 MRPL20Q9BYC9 149 aaKnown RBP11.55□□□□□ -0.56
SREBF2-202ENST00000424354 FBXL15Q9H469 300 aa11.55□□□□□ -0.56
SREBF2-202ENST00000424354 DPM3Q9P2X0 92 aa11.55□□□□□ -0.56
SREBF2-202ENST00000424354 A0A0A6YYD4 124 aa11.54□□□□□ -0.56
SREBF2-202ENST00000424354 CECR9P0C854 216 aa11.54□□□□□ -0.56
SREBF2-202ENST00000424354 GATA2P23769 480 aaPredicted RBP11.54□□□□□ -0.56
SREBF2-202ENST00000424354 NUDT11Q96G61 164 aa11.54□□□□□ -0.56
SREBF2-202ENST00000424354 LYZL4Q96KX0 146 aa11.54□□□□□ -0.56
SREBF2-202ENST00000424354 FBXL7Q9UJT9 491 aa11.54□□□□□ -0.56
SREBF2-202ENST00000424354 FABP5P3A8MUU1 101 aa11.54□□□□□ -0.56
SREBF2-202ENST00000424354 RFPL3SP0C7P2 107 aa11.54□□□□□ -0.56
SREBF2-202ENST00000424354 PVRIGQ6DKI7 326 aa11.54□□□□□ -0.56
SREBF2-202ENST00000424354 TIMP3P35625 211 aa11.54□□□□□ -0.56
SREBF2-202ENST00000424354 EFNB3Q15768 340 aa11.54□□□□□ -0.56
SREBF2-202ENST00000424354 GFI1BQ5VTD9 330 aa11.54□□□□□ -0.56
SREBF2-202ENST00000424354 RASL11AQ6T310 242 aa11.54□□□□□ -0.56
SREBF2-202ENST00000424354 OR9G4Q8NGQ1 327 aa11.54□□□□□ -0.56
SREBF2-202ENST00000424354 C9JCJ5 164 aa11.53□□□□□ -0.56
SREBF2-202ENST00000424354 TIAF1O95411 115 aa11.53□□□□□ -0.56
SREBF2-202ENST00000424354 WBP1Q96G27 269 aa11.53□□□□□ -0.56
SREBF2-202ENST00000424354 TCRBV4S1A1TA0A5B7 111 aa11.53□□□□□ -0.56
SREBF2-202ENST00000424354 SAA1P0DJI8 122 aaPredicted RBP11.53□□□□□ -0.56
SREBF2-202ENST00000424354 ZNF585BQ52M93 769 aa11.53□□□□□ -0.56
SREBF2-202ENST00000424354 CCL19Q99731 98 aa11.53□□□□□ -0.56
SREBF2-202ENST00000424354 SEMA5BQ9P283 1151 aa11.53□□□□□ -0.56
SREBF2-202ENST00000424354 SRSF1Q07955 248 aaKnown RBP eCLIP11.53□□□□□ -0.562e-7■■■□□ 17.8
SREBF2-202ENST00000424354 ALPK3Q96L96 1907 aa11.53□□□□□ -0.56
SREBF2-202ENST00000424354 SMAD7O15105 426 aaKnown RBP11.53□□□□□ -0.56
SREBF2-202ENST00000424354 HOXA3O43365 443 aaPredicted RBP11.53□□□□□ -0.56
SREBF2-202ENST00000424354 GNG5P63218 68 aa11.53□□□□□ -0.56
SREBF2-202ENST00000424354 PSG7Q13046 419 aa11.53□□□□□ -0.56
SREBF2-202ENST00000424354 COQ2Q96H96 371 aa11.53□□□□□ -0.56
SREBF2-202ENST00000424354 ANAPC13Q9BS18 74 aa11.53□□□□□ -0.56
SREBF2-202ENST00000424354 OR5AN1Q8NGI8 311 aa11.53□□□□□ -0.56
SREBF2-202ENST00000424354 IGHV3-35A0A0C4DH35 117 aa11.52□□□□□ -0.56
SREBF2-202ENST00000424354 FAM181BA6NEQ2 426 aa11.52□□□□□ -0.56
SREBF2-202ENST00000424354 CD55P08174 381 aa11.52□□□□□ -0.56
SREBF2-202ENST00000424354 AGMATQ9BSE5 352 aa11.52□□□□□ -0.56
SREBF2-202ENST00000424354 SMPXQ9UHP9 88 aa11.52□□□□□ -0.56
SREBF2-202ENST00000424354 MUC21A0A0G2JKD1 596 aa11.52□□□□□ -0.57
SREBF2-202ENST00000424354 MUC21A0A140T8X8 626 aa11.52□□□□□ -0.57
SREBF2-202ENST00000424354 TRGV3P03979 118 aa11.52□□□□□ -0.57
SREBF2-202ENST00000424354 ERVK11-1P61568 191 aa11.52□□□□□ -0.57
SREBF2-202ENST00000424354 ACTL10Q5JWF8 245 aa11.52□□□□□ -0.57
SREBF2-202ENST00000424354 MUC21Q5SSG8 566 aa11.52□□□□□ -0.57
SREBF2-202ENST00000424354 ARPC1AQ92747 370 aa11.52□□□□□ -0.57
SREBF2-202ENST00000424354 SLC50A1Q9BRV3 221 aa11.52□□□□□ -0.57
SREBF2-202ENST00000424354 WDR87Q6ZQQ6 2873 aa11.52□□□□□ -0.57
SREBF2-202ENST00000424354 A0A087WV48 116 aa11.52□□□□□ -0.57
SREBF2-202ENST00000424354 SAA2-SAA4A0A096LPE2 208 aa11.52□□□□□ -0.57
SREBF2-202ENST00000424354 SAA2P0DJI9 122 aaPredicted RBP11.52□□□□□ -0.57
SREBF2-202ENST00000424354 A6NNC1 897 aa11.52□□□□□ -0.57
SREBF2-202ENST00000424354 FOXH1O75593 365 aa11.52□□□□□ -0.57
SREBF2-202ENST00000424354 CD69Q07108 199 aa11.52□□□□□ -0.57
SREBF2-202ENST00000424354 SRSF4Q08170 494 aaKnown RBP11.52□□□□□ -0.57
SREBF2-202ENST00000424354 IGLV3-32A0A0A0MS00 114 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms