RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 IGLV3-32A0A0A0MS00 114 aa8.84□□□□□ -0.99
COL12A1-203ENST00000416123 MT-ND6P03923 174 aa8.84□□□□□ -0.99
COL12A1-203ENST00000416123 OR9G9P0C7N8 305 aa8.84□□□□□ -0.99
COL12A1-203ENST00000416123 REC114Q7Z4M0 266 aa8.84□□□□□ -0.99
COL12A1-203ENST00000416123 MAPK1IP1LQ8NDC0 245 aa8.84□□□□□ -0.99
COL12A1-203ENST00000416123 CIRBPQ14011 172 aaKnown RBP8.83□□□□□ -1
COL12A1-203ENST00000416123 C18orf12Q96KH6 178 aa8.83□□□□□ -1
COL12A1-203ENST00000416123 SAPCD1Q5SSQ6 148 aa8.83□□□□□ -1
COL12A1-203ENST00000416123 RNASEH2CQ8TDP1 164 aaKnown RBP8.83□□□□□ -1
COL12A1-203ENST00000416123 SDF2L1Q9HCN8 221 aa8.83□□□□□ -1
COL12A1-203ENST00000416123 ERVH48-1M5A8F1 160 aa8.83□□□□□ -1
COL12A1-203ENST00000416123 UCP1P25874 307 aa8.83□□□□□ -1
COL12A1-203ENST00000416123 TXNDC17Q9BRA2 123 aa8.83□□□□□ -1
COL12A1-203ENST00000416123 STAG3L2P0CL84 134 aa8.83□□□□□ -1
COL12A1-203ENST00000416123 DEFB104AQ8WTQ1 72 aa8.83□□□□□ -1
COL12A1-203ENST00000416123 NEUROG1Q92886 237 aa8.83□□□□□ -1
COL12A1-203ENST00000416123 UPK2O00526 184 aa8.83□□□□□ -1
COL12A1-203ENST00000416123 MST1P26927 711 aa8.83□□□□□ -1
COL12A1-203ENST00000416123 NHLRC3Q5JS37 347 aa8.83□□□□□ -1
COL12A1-203ENST00000416123 OR10S1Q8NGN2 331 aa8.83□□□□□ -1
COL12A1-203ENST00000416123 TOMM7Q9P0U1 55 aa8.83□□□□□ -1
COL12A1-203ENST00000416123 PPIFP30405 207 aaKnown RBP8.83□□□□□ -1
COL12A1-203ENST00000416123 GTSCR1Q86UQ5 136 aa8.83□□□□□ -1
COL12A1-203ENST00000416123 PLSCR2Q9NRY7 297 aa8.83□□□□□ -1
COL12A1-203ENST00000416123 TRBV6-7A0A0A0MS04 114 aa8.83□□□□□ -1
COL12A1-203ENST00000416123 TRAV14DV4A0A0A6YYC5 116 aa8.83□□□□□ -1
COL12A1-203ENST00000416123 C15orf61A6NNL5 157 aa8.83□□□□□ -1
COL12A1-203ENST00000416123 TIMP3P35625 211 aa8.83□□□□□ -1
COL12A1-203ENST00000416123 RNASE7Q9H1E1 156 aaKnown RBP8.83□□□□□ -1
COL12A1-203ENST00000416123 TMEM238LA0A1B0GVL6 79 aa8.82□□□□□ -1
COL12A1-203ENST00000416123 A6NJY4 79 aa8.82□□□□□ -1
COL12A1-203ENST00000416123 NPIPB7O75200 414 aa8.82□□□□□ -1
COL12A1-203ENST00000416123 IL18BPO95998 194 aa8.82□□□□□ -1
COL12A1-203ENST00000416123 CLPSP04118 112 aa8.82□□□□□ -1
COL12A1-203ENST00000416123 FOLR2P14207 255 aa8.82□□□□□ -1
COL12A1-203ENST00000416123 CD8AP01732 235 aa8.82□□□□□ -1
COL12A1-203ENST00000416123 SLC25A28Q96A46 364 aa8.82□□□□□ -1
COL12A1-203ENST00000416123 FMC1Q96HJ9 113 aa8.82□□□□□ -1
COL12A1-203ENST00000416123 LDLRAD4O15165 306 aa8.82□□□□□ -1
COL12A1-203ENST00000416123 GPX4P36969 197 aaPredicted RBP8.82□□□□□ -1
COL12A1-203ENST00000416123 ZNF385CQ66K41 422 aaPredicted RBP8.82□□□□□ -1
COL12A1-203ENST00000416123 TMEM167AQ8TBQ9 72 aa8.82□□□□□ -1
COL12A1-203ENST00000416123 HIST1H2BAQ96A08 127 aa8.82□□□□□ -1
COL12A1-203ENST00000416123 NDUFA3O95167 84 aa8.82□□□□□ -1
COL12A1-203ENST00000416123 SMIM6P0DI80 62 aa8.82□□□□□ -1
COL12A1-203ENST00000416123 PLSCR4Q9NRQ2 329 aa8.82□□□□□ -1
COL12A1-203ENST00000416123 ABCA1O95477 2261 aa8.82□□□□□ -1
COL12A1-203ENST00000416123 IGHV2-26A0A0B4J1V2 119 aa8.82□□□□□ -1
COL12A1-203ENST00000416123 C5orf63A6NC05 138 aa8.82□□□□□ -1
COL12A1-203ENST00000416123 SOD3P08294 240 aa8.82□□□□□ -1
COL12A1-203ENST00000416123 C2orf88Q9BSF0 95 aa8.82□□□□□ -1
COL12A1-203ENST00000416123 CRIM1Q9NZV1 1036 aa8.82□□□□□ -1
COL12A1-203ENST00000416123 TMEM131Q92545 1883 aa8.82□□□□□ -1
COL12A1-203ENST00000416123 IGKV1D-8A0A087WSZ0 117 aa8.82□□□□□ -1
COL12A1-203ENST00000416123 FXYD7P58549 80 aa8.82□□□□□ -1
COL12A1-203ENST00000416123 TCF21O43680 179 aa8.81□□□□□ -1
COL12A1-203ENST00000416123 PYYP10082 97 aa8.81□□□□□ -1
COL12A1-203ENST00000416123 ZNF362Q5T0B9 420 aaPredicted RBP8.81□□□□□ -1
COL12A1-203ENST00000416123 C8orf46Q8TAG6 207 aa8.81□□□□□ -1
COL12A1-203ENST00000416123 PSMG3Q9BT73 122 aaPredicted RBP8.81□□□□□ -1
COL12A1-203ENST00000416123 ZNF324BQ6AW86 544 aaPredicted RBP8.81□□□□□ -1
COL12A1-203ENST00000416123 FAM131CQ96AQ9 280 aa8.81□□□□□ -1
COL12A1-203ENST00000416123 TMEM70Q9BUB7 260 aa8.81□□□□□ -1
COL12A1-203ENST00000416123 SNAI2O43623 268 aa8.81□□□□□ -1
COL12A1-203ENST00000416123 IGKV1-27A0A075B6S5 117 aa8.81□□□□□ -1
COL12A1-203ENST00000416123 WNT2P09544 360 aa8.81□□□□□ -1
COL12A1-203ENST00000416123 ZNF106Q9H2Y7 1883 aaKnown RBP8.81□□□□□ -1
COL12A1-203ENST00000416123 TANC2Q9HCD6 1990 aa8.81□□□□□ -1
COL12A1-203ENST00000416123 FBLN7Q53RD9 439 aa8.81□□□□□ -1
COL12A1-203ENST00000416123 TRAV8-6A0A0B4J262 113 aa8.81□□□□□ -1
COL12A1-203ENST00000416123 TMEM178BH3BS89 294 aa8.81□□□□□ -1
COL12A1-203ENST00000416123 EVI2AP22794 236 aa8.81□□□□□ -1
COL12A1-203ENST00000416123 ZNF525Q8N782 197 aa8.81□□□□□ -1
COL12A1-203ENST00000416123 NABP1Q96AH0 204 aa8.81□□□□□ -1
COL12A1-203ENST00000416123 PRELID3AQ96N28 172 aa8.8□□□□□ -1
COL12A1-203ENST00000416123 APOHP02749 345 aaPredicted RBP8.8□□□□□ -1
COL12A1-203ENST00000416123 GGACTQ9BVM4 153 aa8.8□□□□□ -1
COL12A1-203ENST00000416123 J3QRE1 110 aa8.8□□□□□ -1
COL12A1-203ENST00000416123 RPL15P61313 204 aaKnown RBP8.8□□□□□ -1
COL12A1-203ENST00000416123 KCNS1Q96KK3 526 aa8.8□□□□□ -1
COL12A1-203ENST00000416123 IGKV1-12A0A0C4DH73 117 aa8.8□□□□□ -1
COL12A1-203ENST00000416123 HIGD1CA8MV81 97 aa8.8□□□□□ -1
COL12A1-203ENST00000416123 IGKV1D-12P01611 117 aa8.8□□□□□ -1
COL12A1-203ENST00000416123 IFITM2Q01629 132 aa8.8□□□□□ -1
COL12A1-203ENST00000416123 LINC00271P0C7V0 271 aa8.8□□□□□ -1
COL12A1-203ENST00000416123 GFI1BQ5VTD9 330 aa8.8□□□□□ -1
COL12A1-203ENST00000416123 Q71RC1 249 aaPredicted RBP8.8□□□□□ -1
COL12A1-203ENST00000416123 F8VVB4 439 aa8.8□□□□□ -1
COL12A1-203ENST00000416123 F8VWA3 439 aa8.8□□□□□ -1
COL12A1-203ENST00000416123 DEFB121Q5J5C9 76 aa8.8□□□□□ -1
COL12A1-203ENST00000416123 FER1L6-AS1Q8NA97 138 aa8.8□□□□□ -1
COL12A1-203ENST00000416123 GFI1Q99684 422 aa8.8□□□□□ -1
COL12A1-203ENST00000416123 SLC25A15Q9Y619 301 aa8.8□□□□□ -1
COL12A1-203ENST00000416123 CXorf65A6NEN9 183 aa8.8□□□□□ -1
COL12A1-203ENST00000416123 M0QZK8 103 aa8.8□□□□□ -1
COL12A1-203ENST00000416123 TDGF1P13385 188 aa8.8□□□□□ -1
COL12A1-203ENST00000416123 LINC00205P59089 165 aa8.8□□□□□ -1
COL12A1-203ENST00000416123 SRSF7Q16629 238 aaKnown RBP eCLIP8.8□□□□□ -1
COL12A1-203ENST00000416123 C10orf55Q5SWW7 151 aa8.8□□□□□ -1
COL12A1-203ENST00000416123 CYB5R2Q6BCY4 276 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms