RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 LILRB2Q8N423 598 aa11.1□□□□□ -0.63
SF3B1-204ENST00000414963 MYOZ3Q8TDC0 251 aa11.1□□□□□ -0.63
SF3B1-204ENST00000414963 SCARB1Q8WTV0 552 aa11.1□□□□□ -0.63
SF3B1-204ENST00000414963 CXorf58Q96LI9 332 aa11.1□□□□□ -0.63
SF3B1-204ENST00000414963 ATP6V0BQ99437 205 aa11.1□□□□□ -0.63
SF3B1-204ENST00000414963 PARD6GQ9BYG4 376 aaPredicted RBP11.1□□□□□ -0.63
SF3B1-204ENST00000414963 SMIM3Q9BZL3 60 aa11.1□□□□□ -0.63
SF3B1-204ENST00000414963 KLK15Q9H2R5 256 aa11.1□□□□□ -0.63
SF3B1-204ENST00000414963 NPVFQ9HCQ7 196 aa11.1□□□□□ -0.63
SF3B1-204ENST00000414963 ZNF355PQ9NSJ1 428 aa11.1□□□□□ -0.63
SF3B1-204ENST00000414963 UQCC1Q9NVA1 299 aa11.1□□□□□ -0.63
SF3B1-204ENST00000414963 JMJD1CQ15652 2540 aa11.09□□□□□ -0.63
SF3B1-204ENST00000414963 C2CD3Q4AC94 2353 aa11.09□□□□□ -0.63
SF3B1-204ENST00000414963 A0A1B0GUS0 222 aa11.09□□□□□ -0.63
SF3B1-204ENST00000414963 CLPSL1A2RUU4 121 aa11.09□□□□□ -0.63
SF3B1-204ENST00000414963 JTBO76095 146 aa11.09□□□□□ -0.63
SF3B1-204ENST00000414963 TRGV3P03979 118 aa11.09□□□□□ -0.63
SF3B1-204ENST00000414963 PF4V1P10720 104 aa11.09□□□□□ -0.63
SF3B1-204ENST00000414963 ATP5G2Q06055 141 aa11.09□□□□□ -0.63
SF3B1-204ENST00000414963 KIAA0141Q14154 515 aaPredicted RBP11.09□□□□□ -0.63
SF3B1-204ENST00000414963 ZNF266Q14584 549 aa11.09□□□□□ -0.63
SF3B1-204ENST00000414963 OPCMLQ14982 345 aa11.09□□□□□ -0.63
SF3B1-204ENST00000414963 C15orf32Q32M92 178 aa11.09□□□□□ -0.63
SF3B1-204ENST00000414963 TMEM144Q7Z5S9 345 aa11.09□□□□□ -0.63
SF3B1-204ENST00000414963 KLHDC1Q8N7A1 406 aa11.09□□□□□ -0.63
SF3B1-204ENST00000414963 UBAC2Q8NBM4 344 aa11.09□□□□□ -0.63
SF3B1-204ENST00000414963 OR4X1Q8NH49 305 aa11.09□□□□□ -0.63
SF3B1-204ENST00000414963 SLC35E1Q96K37 410 aa11.09□□□□□ -0.63
SF3B1-204ENST00000414963 MS4A10Q96PG2 267 aa11.09□□□□□ -0.63
SF3B1-204ENST00000414963 TXN2Q99757 166 aa11.09□□□□□ -0.63
SF3B1-204ENST00000414963 BORCS7-ASMTA0A0B4J1R7 106 aa11.08□□□□□ -0.64
SF3B1-204ENST00000414963 A0A0G2JLM5 398 aa11.08□□□□□ -0.64
SF3B1-204ENST00000414963 MFAP4P55083 255 aa11.08□□□□□ -0.64
SF3B1-204ENST00000414963 PROK1P58294 105 aa11.08□□□□□ -0.64
SF3B1-204ENST00000414963 TPPP2P59282 170 aa11.08□□□□□ -0.64
SF3B1-204ENST00000414963 C10orf99Q6UWK7 81 aa11.08□□□□□ -0.64
SF3B1-204ENST00000414963 TREML4Q6UXN2 200 aa11.08□□□□□ -0.64
SF3B1-204ENST00000414963 THAP8Q8NA92 274 aa11.08□□□□□ -0.64
SF3B1-204ENST00000414963 OR5AU1Q8NGC0 362 aa11.08□□□□□ -0.64
SF3B1-204ENST00000414963 ARV1Q9H2C2 271 aa11.08□□□□□ -0.64
SF3B1-204ENST00000414963 C21orf62Q9NYP8 219 aa11.08□□□□□ -0.64
SF3B1-204ENST00000414963 MRPL36Q9P0J6 103 aaKnown RBP11.08□□□□□ -0.64
SF3B1-204ENST00000414963 WDR83OSQ9Y284 106 aa11.08□□□□□ -0.64
SF3B1-204ENST00000414963 LSM4Q9Y4Z0 139 aaKnown RBP11.08□□□□□ -0.64
SF3B1-204ENST00000414963 CUBNO60494 3623 aa11.08□□□□□ -0.64
SF3B1-204ENST00000414963 TRBV7-1A0A0A6YYK4 115 aa11.07□□□□□ -0.64
SF3B1-204ENST00000414963 MFSD2BA6NFX1 497 aa11.07□□□□□ -0.64
SF3B1-204ENST00000414963 MPDU1O75352 247 aa11.07□□□□□ -0.64
SF3B1-204ENST00000414963 IFNA5P01569 189 aa11.07□□□□□ -0.64
SF3B1-204ENST00000414963 SRSF2Q01130 221 aaKnown RBP11.07□□□□□ -0.64
SF3B1-204ENST00000414963 RPL7L1Q6DKI1 246 aaKnown RBP11.07□□□□□ -0.64
SF3B1-204ENST00000414963 SLC51BQ86UW2 128 aa11.07□□□□□ -0.64
SF3B1-204ENST00000414963 STOML3Q8TAV4 291 aa11.07□□□□□ -0.64
SF3B1-204ENST00000414963 ZNF502Q8TBZ5 544 aa11.07□□□□□ -0.64
SF3B1-204ENST00000414963 WFDC12Q8WWY7 111 aa11.07□□□□□ -0.64
SF3B1-204ENST00000414963 NPIPB3Q92617 1050 aa11.07□□□□□ -0.64
SF3B1-204ENST00000414963 EEF1AKMT3Q96AZ1 226 aa11.07□□□□□ -0.64
SF3B1-204ENST00000414963 WDR61Q9GZS3 305 aaKnown RBP11.07□□□□□ -0.64
SF3B1-204ENST00000414963 GAR1Q9NY12 217 aaKnown RBP11.07□□□□□ -0.64
SF3B1-204ENST00000414963 BOLA1Q9Y3E2 137 aa11.07□□□□□ -0.64
SF3B1-204ENST00000414963 RNF114Q9Y508 228 aa11.07□□□□□ -0.64
SF3B1-204ENST00000414963 SETD2Q9BYW2 2564 aaPredicted RBP11.07□□□□□ -0.64
SF3B1-204ENST00000414963 IGHV3-21A0A0B4J1V1 117 aa11.06□□□□□ -0.64
SF3B1-204ENST00000414963 F8W735 103 aaPredicted RBP11.06□□□□□ -0.64
SF3B1-204ENST00000414963 CLN5O75503 358 aa11.06□□□□□ -0.64
SF3B1-204ENST00000414963 IGHV3-48P01763 117 aa11.06□□□□□ -0.64
SF3B1-204ENST00000414963 NPBWR1P48145 328 aa11.06□□□□□ -0.64
SF3B1-204ENST00000414963 RND2P52198 227 aa11.06□□□□□ -0.64
SF3B1-204ENST00000414963 EIF5AP63241 154 aaKnown RBP11.06□□□□□ -0.64
SF3B1-204ENST00000414963 TCTEX1D4Q5JR98 221 aa11.06□□□□□ -0.64
SF3B1-204ENST00000414963 FAM209BQ5JX69 171 aa11.06□□□□□ -0.64
SF3B1-204ENST00000414963 ACSM6Q6P461 480 aa11.06□□□□□ -0.64
SF3B1-204ENST00000414963 TEPPQ6URK8 271 aa11.06□□□□□ -0.64
SF3B1-204ENST00000414963 ZNF491Q8N8L2 437 aa11.06□□□□□ -0.64
SF3B1-204ENST00000414963 ACY3Q96HD9 319 aa11.06□□□□□ -0.64
SF3B1-204ENST00000414963 UBE2E2Q96LR5 201 aa11.06□□□□□ -0.64
SF3B1-204ENST00000414963 IGKV1OR2-108A0A075B7D4 117 aa11.05□□□□□ -0.64
SF3B1-204ENST00000414963 TRAV30A0A087WSZ9 112 aa11.05□□□□□ -0.64
SF3B1-204ENST00000414963 UBE2L5PA0A1B0GUS4 154 aa11.05□□□□□ -0.64
SF3B1-204ENST00000414963 SMCO3A2RU48 225 aa11.05□□□□□ -0.64
SF3B1-204ENST00000414963 RPLP1P05386 114 aaKnown RBP11.05□□□□□ -0.64
SF3B1-204ENST00000414963 AKR1C1Q04828 323 aa11.05□□□□□ -0.64
SF3B1-204ENST00000414963 FOXL1Q12952 345 aa11.05□□□□□ -0.64
SF3B1-204ENST00000414963 ZNF343Q6P1L6 599 aa11.05□□□□□ -0.64
SF3B1-204ENST00000414963 BTNL8Q6UX41 500 aa11.05□□□□□ -0.64
SF3B1-204ENST00000414963 PRIMA1Q86XR5 153 aa11.05□□□□□ -0.64
SF3B1-204ENST00000414963 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.05□□□□□ -0.64
SF3B1-204ENST00000414963 OR4X2Q8NGF9 303 aa11.05□□□□□ -0.64
SF3B1-204ENST00000414963 SCGB1C1Q8TD33 95 aa11.05□□□□□ -0.64
SF3B1-204ENST00000414963 TRGV9Q99603 122 aa11.05□□□□□ -0.64
SF3B1-204ENST00000414963 GINS3Q9BRX5 216 aa11.05□□□□□ -0.64
SF3B1-204ENST00000414963 ZNF471Q9BX82 626 aaPredicted RBP11.05□□□□□ -0.64
SF3B1-204ENST00000414963 IGKV1D-37A0A075B6S9 117 aa11.04□□□□□ -0.64
SF3B1-204ENST00000414963 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.04□□□□□ -0.64
SF3B1-204ENST00000414963 IGLC1P0CG04 106 aa11.04□□□□□ -0.64
SF3B1-204ENST00000414963 TPT1P13693 172 aaKnown RBP11.04□□□□□ -0.64
SF3B1-204ENST00000414963 FGF7P21781 194 aa11.04□□□□□ -0.64
SF3B1-204ENST00000414963 DEFA5Q01523 94 aa11.04□□□□□ -0.64
SF3B1-204ENST00000414963 RAB31Q13636 194 aa11.04□□□□□ -0.64
SF3B1-204ENST00000414963 LCNL1Q6ZST4 164 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms