RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 LYZL4Q96KX0 146 aa10.82□□□□□ -0.68
RNF43-201ENST00000407977 A0A0A6YYD4 124 aa10.81□□□□□ -0.68
RNF43-201ENST00000407977 DUTP33316 252 aaKnown RBP10.81□□□□□ -0.68
RNF43-201ENST00000407977 SUPT4H1P63272 117 aaKnown RBP10.81□□□□□ -0.68
RNF43-201ENST00000407977 ATXN8Q156A1 80 aa10.81□□□□□ -0.68
RNF43-201ENST00000407977 ZNF831Q5JPB2 1677 aa10.81□□□□□ -0.68
RNF43-201ENST00000407977 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.81□□□□□ -0.68
RNF43-201ENST00000407977 IGKV3OR2-268A0A0C4DH90 116 aa10.81□□□□□ -0.68
RNF43-201ENST00000407977 MUC21A0A0G2JKD1 596 aa10.81□□□□□ -0.68
RNF43-201ENST00000407977 MUC21A0A140T8X8 626 aa10.81□□□□□ -0.68
RNF43-201ENST00000407977 IGKV1D-33P01593 117 aa10.81□□□□□ -0.68
RNF43-201ENST00000407977 IGKV1-33P01594 117 aa10.81□□□□□ -0.68
RNF43-201ENST00000407977 MUC21Q5SSG8 566 aa10.81□□□□□ -0.68
RNF43-201ENST00000407977 ATG2BQ96BY7 2078 aa10.81□□□□□ -0.68
RNF43-201ENST00000407977 KIR3DL3Q8N743 410 aa10.81□□□□□ -0.68
RNF43-201ENST00000407977 NEU4Q8WWR8 484 aaPredicted RBP10.81□□□□□ -0.68
RNF43-201ENST00000407977 SLC25A15Q9Y619 301 aa10.81□□□□□ -0.68
RNF43-201ENST00000407977 ATAD5Q96QE3 1844 aa10.81□□□□□ -0.68
RNF43-201ENST00000407977 CKS1BP61024 79 aa10.81□□□□□ -0.68
RNF43-201ENST00000407977 IGLV3-12A0A075B6K2 115 aa10.8□□□□□ -0.68
RNF43-201ENST00000407977 TREML4Q6UXN2 200 aa10.8□□□□□ -0.68
RNF43-201ENST00000407977 C8orf46Q8TAG6 207 aa10.8□□□□□ -0.68
RNF43-201ENST00000407977 IGHV3OR16-13A0A075B7E8 117 aa10.8□□□□□ -0.68
RNF43-201ENST00000407977 IGHV3-74A0A0B4J1X5 117 aa10.8□□□□□ -0.68
RNF43-201ENST00000407977 A6NNC1 897 aa10.8□□□□□ -0.68
RNF43-201ENST00000407977 UMODP07911 640 aa10.8□□□□□ -0.68
RNF43-201ENST00000407977 LYL1P12980 280 aa10.8□□□□□ -0.68
RNF43-201ENST00000407977 GGTLC1Q9BX51 225 aa10.8□□□□□ -0.68
RNF43-201ENST00000407977 ERG28Q9UKR5 140 aa10.8□□□□□ -0.68
RNF43-201ENST00000407977 NBR2O15453 112 aa10.8□□□□□ -0.68
RNF43-201ENST00000407977 TGFAP01135 160 aa10.8□□□□□ -0.68
RNF43-201ENST00000407977 SRSF6Q13247 344 aaKnown RBP10.8□□□□□ -0.68
RNF43-201ENST00000407977 VSIRQ9H7M9 311 aa10.8□□□□□ -0.68
RNF43-201ENST00000407977 RAMP3O60896 148 aa10.8□□□□□ -0.68
RNF43-201ENST00000407977 TIAF1O95411 115 aa10.8□□□□□ -0.68
RNF43-201ENST00000407977 FAM57AQ8TBR7 257 aa10.8□□□□□ -0.68
RNF43-201ENST00000407977 IMMP1LQ96LU5 166 aa10.8□□□□□ -0.68
RNF43-201ENST00000407977 DCTN5Q9BTE1 182 aa10.8□□□□□ -0.68
RNF43-201ENST00000407977 DEPPQ9NTK1 212 aa10.8□□□□□ -0.68
RNF43-201ENST00000407977 SLC25A20O43772 301 aa10.79□□□□□ -0.68
RNF43-201ENST00000407977 PYYP10082 97 aa10.79□□□□□ -0.68
RNF43-201ENST00000407977 NMSQ5H8A3 153 aa10.79□□□□□ -0.68
RNF43-201ENST00000407977 TNFRSF14Q92956 283 aa10.79□□□□□ -0.68
RNF43-201ENST00000407977 TDRD15B5MCY1 1934 aaKnown RBP10.79□□□□□ -0.68
RNF43-201ENST00000407977 DOCK5Q9H7D0 1870 aa10.79□□□□□ -0.68
RNF43-201ENST00000407977 RGPD4Q7Z3J3 1758 aa10.79□□□□□ -0.68
RNF43-201ENST00000407977 TMEM238C9JI98 176 aa10.79□□□□□ -0.68
RNF43-201ENST00000407977 RHOGP84095 191 aa10.79□□□□□ -0.68
RNF43-201ENST00000407977 STPG1Q5TH74 334 aa10.79□□□□□ -0.68
RNF43-201ENST00000407977 RPRMLQ8N4K4 120 aa10.79□□□□□ -0.68
RNF43-201ENST00000407977 DUX3Q96PT4 197 aa10.79□□□□□ -0.68
RNF43-201ENST00000407977 IGKV1D-8A0A087WSZ0 117 aa10.79□□□□□ -0.68
RNF43-201ENST00000407977 APC2O95996 2303 aa10.79□□□□□ -0.68
RNF43-201ENST00000407977 FAM71F2Q6NXP2 309 aa10.79□□□□□ -0.68
RNF43-201ENST00000407977 TMEM14EPQ6UXP3 125 aa10.79□□□□□ -0.68
RNF43-201ENST00000407977 ZIC4Q8N9L1 334 aa10.79□□□□□ -0.68
RNF43-201ENST00000407977 PGPEP1Q9NXJ5 209 aa10.79□□□□□ -0.68
RNF43-201ENST00000407977 IGKV3-20P01619 116 aa10.79□□□□□ -0.68
RNF43-201ENST00000407977 LY6EQ16553 131 aa10.79□□□□□ -0.68
RNF43-201ENST00000407977 CENPVQ7Z7K6 275 aaPredicted RBP10.79□□□□□ -0.68
RNF43-201ENST00000407977 IGHV4-39P01824 125 aa10.78□□□□□ -0.68
RNF43-201ENST00000407977 MYOD1P15172 320 aa10.78□□□□□ -0.68
RNF43-201ENST00000407977 RNASE4P34096 147 aaKnown RBP10.78□□□□□ -0.68
RNF43-201ENST00000407977 RSPO4Q2I0M5 234 aaPredicted RBP10.78□□□□□ -0.68
RNF43-201ENST00000407977 RPP25LQ8N5L8 163 aaKnown RBP10.78□□□□□ -0.68
RNF43-201ENST00000407977 DUSP14O95147 198 aaKnown RBP10.78□□□□□ -0.68
RNF43-201ENST00000407977 ZNF837Q96EG3 531 aaPredicted RBP10.78□□□□□ -0.68
RNF43-201ENST00000407977 IGLV3-19P01714 112 aa10.78□□□□□ -0.68
RNF43-201ENST00000407977 OR9G9P0C7N8 305 aa10.78□□□□□ -0.68
RNF43-201ENST00000407977 CFAP161Q6P656 301 aa10.78□□□□□ -0.68
RNF43-201ENST00000407977 ANKRD36A6QL64 1941 aa10.78□□□□□ -0.68
RNF43-201ENST00000407977 ALPK2Q86TB3 2170 aa10.78□□□□□ -0.68
RNF43-201ENST00000407977 C17orf100A8MU93 164 aa10.78□□□□□ -0.68
RNF43-201ENST00000407977 CD5LO43866 347 aa10.78□□□□□ -0.68
RNF43-201ENST00000407977 CRYGSP22914 178 aa10.78□□□□□ -0.68
RNF43-201ENST00000407977 LAGE3Q14657 143 aa10.78□□□□□ -0.68
RNF43-201ENST00000407977 ESDP10768 282 aa10.77□□□□□ -0.68
RNF43-201ENST00000407977 BCL6BQ8N143 479 aaPredicted RBP10.77□□□□□ -0.68
RNF43-201ENST00000407977 IGHV1-2P23083 117 aa10.77□□□□□ -0.68
RNF43-201ENST00000407977 CACNA1IQ9P0X4 2223 aa10.77□□□□□ -0.68
RNF43-201ENST00000407977 HEATR5BQ9P2D3 2071 aa10.77□□□□□ -0.69
RNF43-201ENST00000407977 C3orf79P0CE67 100 aa10.77□□□□□ -0.69
RNF43-201ENST00000407977 MORN3Q6PF18 240 aaPredicted RBP10.77□□□□□ -0.69
RNF43-201ENST00000407977 CLEC19AQ6UXS0 136 aa10.77□□□□□ -0.69
RNF43-201ENST00000407977 JMJD8Q96S16 334 aa10.77□□□□□ -0.69
RNF43-201ENST00000407977 TOMM7Q9P0U1 55 aa10.77□□□□□ -0.69
RNF43-201ENST00000407977 TRAV2A0A0B4J234 112 aa10.77□□□□□ -0.69
RNF43-201ENST00000407977 TMPRSS3P57727 454 aa10.77□□□□□ -0.69
RNF43-201ENST00000407977 SIGLEC12Q96PQ1 595 aa10.77□□□□□ -0.69
RNF43-201ENST00000407977 IGHV3-49A0A0A0MS15 119 aa10.77□□□□□ -0.69
RNF43-201ENST00000407977 IGHV3-23P01764 117 aa10.77□□□□□ -0.69
RNF43-201ENST00000407977 MRPL14Q6P1L8 145 aaKnown RBP10.77□□□□□ -0.69
RNF43-201ENST00000407977 TMEM133Q9H2Q1 129 aa10.77□□□□□ -0.69
RNF43-201ENST00000407977 ZNF319Q9P2F9 582 aa10.77□□□□□ -0.69
RNF43-201ENST00000407977 LOC102723996A0A087X1L8 192 aa10.76□□□□□ -0.69
RNF43-201ENST00000407977 GGTLC3B5MD39 225 aa10.76□□□□□ -0.69
RNF43-201ENST00000407977 KLF17Q5JT82 389 aaPredicted RBP10.76□□□□□ -0.69
RNF43-201ENST00000407977 ZNF664Q8N3J9 261 aa10.76□□□□□ -0.69
RNF43-201ENST00000407977 ADAMTSL1Q8N6G6 1762 aa10.76□□□□□ -0.69
RNF43-201ENST00000407977 PIKFYVEQ9Y2I7 2098 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms