RNA–Protein interactions for RNA: ENST00000406477.7

PARVB-204, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-204ENST00000406477 SEPSECSQ9HD40 501 aaKnown RBP12.9□□□□□ -0.34
PARVB-204ENST00000406477 DNAJC4Q9NNZ3 241 aa12.9□□□□□ -0.34
PARVB-204ENST00000406477 IGHV4-61A0A0C4DH41 118 aa12.9□□□□□ -0.35
PARVB-204ENST00000406477 NCBP2LA6PVI3 153 aaKnown RBP12.9□□□□□ -0.35
PARVB-204ENST00000406477 CTRB1P17538 263 aa12.9□□□□□ -0.35
PARVB-204ENST00000406477 CST9LP1Q5W188 147 aa12.9□□□□□ -0.35
PARVB-204ENST00000406477 CTRB2Q6GPI1 263 aa12.9□□□□□ -0.35
PARVB-204ENST00000406477 SMIM7Q9BQ49 75 aa12.9□□□□□ -0.35
PARVB-204ENST00000406477 WNT10AQ9GZT5 417 aa12.9□□□□□ -0.35
PARVB-204ENST00000406477 SDF2L1Q9HCN8 221 aa12.9□□□□□ -0.35
PARVB-204ENST00000406477 TNFRSF19Q9NS68 423 aa12.9□□□□□ -0.35
PARVB-204ENST00000406477 ARHGAP32A7KAX9 2087 aa12.89□□□□□ -0.35
PARVB-204ENST00000406477 KALRNO60229 2985 aa12.89□□□□□ -0.35
PARVB-204ENST00000406477 ELOA3CA0A087WX78 387 aaPredicted RBP12.89□□□□□ -0.35
PARVB-204ENST00000406477 CXorf65A6NEN9 183 aa12.89□□□□□ -0.35
PARVB-204ENST00000406477 COX7A2P2O60397 106 aa12.89□□□□□ -0.35
PARVB-204ENST00000406477 C8orf88P0DMB2 117 aa12.89□□□□□ -0.35
PARVB-204ENST00000406477 SLC25A16P16260 332 aa12.89□□□□□ -0.35
PARVB-204ENST00000406477 ATF4P18848 351 aaPredicted RBP12.89□□□□□ -0.35
PARVB-204ENST00000406477 SAA4P35542 130 aa12.89□□□□□ -0.35
PARVB-204ENST00000406477 MFAP2P55001 183 aa12.89□□□□□ -0.35
PARVB-204ENST00000406477 TMEM241Q24JQ0 296 aa12.89□□□□□ -0.35
PARVB-204ENST00000406477 MIR17HGQ75NE6 70 aa12.89□□□□□ -0.35
PARVB-204ENST00000406477 NBEAQ8NFP9 2946 aa12.88□□□□□ -0.35
PARVB-204ENST00000406477 IGKV1D-37A0A075B6S9 117 aa12.88□□□□□ -0.35
PARVB-204ENST00000406477 NPIPB5A8MRT5 1133 aa12.88□□□□□ -0.35
PARVB-204ENST00000406477 FABP1P07148 127 aa12.88□□□□□ -0.35
PARVB-204ENST00000406477 SPATA31B1PQ5VZV4 182 aa12.88□□□□□ -0.35
PARVB-204ENST00000406477 ARPC1AQ92747 370 aa12.88□□□□□ -0.35
PARVB-204ENST00000406477 UHRF2Q96PU4 802 aa12.88□□□□□ -0.35
PARVB-204ENST00000406477 CENPVL3A0A0U1RRI6 287 aa12.87□□□□□ -0.35
PARVB-204ENST00000406477 MT-ND4LP03901 98 aa12.87□□□□□ -0.35
PARVB-204ENST00000406477 GATA2P23769 480 aaPredicted RBP12.87□□□□□ -0.35
PARVB-204ENST00000406477 CD24P25063 80 aa12.87□□□□□ -0.35
PARVB-204ENST00000406477 AKR1C3P42330 323 aa12.87□□□□□ -0.35
PARVB-204ENST00000406477 UBE2G2P60604 165 aa12.87□□□□□ -0.35
PARVB-204ENST00000406477 C10orf113Q5VZT2 155 aa12.87□□□□□ -0.35
PARVB-204ENST00000406477 OR4X1Q8NH49 305 aa12.87□□□□□ -0.35
PARVB-204ENST00000406477 PERPQ96FX8 193 aa12.87□□□□□ -0.35
PARVB-204ENST00000406477 CTDSP1Q9GZU7 261 aa12.87□□□□□ -0.35
PARVB-204ENST00000406477 PARLQ9H300 379 aa12.87□□□□□ -0.35
PARVB-204ENST00000406477 TMEM242Q9NWH2 141 aa12.87□□□□□ -0.35
PARVB-204ENST00000406477 FAM208BQ5VWN6 2430 aa12.87□□□□□ -0.35
PARVB-204ENST00000406477 IGHV4-30-2A0A087WSY4 118 aa12.86□□□□□ -0.35
PARVB-204ENST00000406477 PSMB11A5LHX3 300 aa12.86□□□□□ -0.35
PARVB-204ENST00000406477 COLCA2A8K830 154 aa12.86□□□□□ -0.35
PARVB-204ENST00000406477 I3L2K1 104 aa12.86□□□□□ -0.35
PARVB-204ENST00000406477 OR2C1O95371 312 aa12.86□□□□□ -0.35
PARVB-204ENST00000406477 APELAP0DMC3 54 aa12.86□□□□□ -0.35
PARVB-204ENST00000406477 CX3CL1P78423 397 aa12.86□□□□□ -0.35
PARVB-204ENST00000406477 ZNF674Q2M3X9 581 aa12.86□□□□□ -0.35
PARVB-204ENST00000406477 C17orf50Q8WW18 174 aa12.86□□□□□ -0.35
PARVB-204ENST00000406477 RPUSD4Q96CM3 377 aaKnown RBP12.86□□□□□ -0.35
PARVB-204ENST00000406477 AJUBAQ96IF1 538 aa12.86□□□□□ -0.35
PARVB-204ENST00000406477 RASL11BQ9BPW5 248 aa12.86□□□□□ -0.35
PARVB-204ENST00000406477 ZFYVE26Q68DK2 2539 aa12.86□□□□□ -0.35
PARVB-204ENST00000406477 IGHV1-69DA0A0B4J2H0 117 aa12.86□□□□□ -0.35
PARVB-204ENST00000406477 IGHV1-69P01742 117 aa12.86□□□□□ -0.35
PARVB-204ENST00000406477 HLA-DRB1P01911 266 aa12.86□□□□□ -0.35
PARVB-204ENST00000406477 GATA3P23771 443 aa12.86□□□□□ -0.35
PARVB-204ENST00000406477 SRSF1Q07955 248 aaKnown RBP eCLIP12.86□□□□□ -0.35
PARVB-204ENST00000406477 RNF212Q495C1 297 aa12.86□□□□□ -0.35
PARVB-204ENST00000406477 TTC9CQ8N5M4 171 aa12.86□□□□□ -0.35
PARVB-204ENST00000406477 STXBP6Q8NFX7 210 aa12.86□□□□□ -0.35
PARVB-204ENST00000406477 TMEM37Q8WXS4 190 aa12.86□□□□□ -0.35
PARVB-204ENST00000406477 THYN1Q9P016 225 aa12.86□□□□□ -0.35
PARVB-204ENST00000406477 MRPL36Q9P0J6 103 aaKnown RBP12.86□□□□□ -0.35
PARVB-204ENST00000406477 RELNP78509 3460 aa12.85□□□□□ -0.35
PARVB-204ENST00000406477 OR7C2O60412 319 aa12.85□□□□□ -0.35
PARVB-204ENST00000406477 MSMBP08118 114 aa12.85□□□□□ -0.35
PARVB-204ENST00000406477 FOLR2P14207 255 aa12.85□□□□□ -0.35
PARVB-204ENST00000406477 ATP5G3P48201 142 aa12.85□□□□□ -0.35
PARVB-204ENST00000406477 PLP1P60201 277 aa12.85□□□□□ -0.35
PARVB-204ENST00000406477 ZNF90Q03938 601 aa12.85□□□□□ -0.35
PARVB-204ENST00000406477 Q8N9W7 124 aa12.85□□□□□ -0.35
PARVB-204ENST00000406477 DOK5Q9P104 306 aa12.85□□□□□ -0.35
PARVB-204ENST00000406477 DOPEY1Q5JWR5 2465 aa12.84□□□□□ -0.35
PARVB-204ENST00000406477 HRNRQ86YZ3 2850 aaPredicted RBP12.84□□□□□ -0.35
PARVB-204ENST00000406477 TRAV30A0A087WSZ9 112 aa12.84□□□□□ -0.35
PARVB-204ENST00000406477 B4DSR2 109 aa12.84□□□□□ -0.35
PARVB-204ENST00000406477 IGHV3-48P01763 117 aa12.84□□□□□ -0.35
PARVB-204ENST00000406477 TMEM68Q96MH6 324 aa12.84□□□□□ -0.35
PARVB-204ENST00000406477 SMG1Q96Q15 3661 aaKnown RBP12.83□□□□□ -0.36
PARVB-204ENST00000406477 TRAV20A0A0B4J274 112 aa12.83□□□□□ -0.36
PARVB-204ENST00000406477 A0A1W2PRE2 83 aa12.83□□□□□ -0.36
PARVB-204ENST00000406477 HYPMO75409 117 aa12.83□□□□□ -0.36
PARVB-204ENST00000406477 SCGB2A1O75556 95 aa12.83□□□□□ -0.36
PARVB-204ENST00000406477 CLEC12BQ2HXU8 276 aa12.83□□□□□ -0.36
PARVB-204ENST00000406477 HIST1H2BAQ96A08 127 aa12.83□□□□□ -0.36
PARVB-204ENST00000406477 C11orf52Q96A22 123 aa12.83□□□□□ -0.36
PARVB-204ENST00000406477 DMRT1Q9Y5R6 373 aa12.83□□□□□ -0.36
PARVB-204ENST00000406477 CLDN34H7C241 214 aa12.82□□□□□ -0.36
PARVB-204ENST00000406477 IGLC1P0CG04 106 aa12.82□□□□□ -0.36
PARVB-204ENST00000406477 HIST1H1BP16401 226 aaKnown RBP12.82□□□□□ -0.36
PARVB-204ENST00000406477 FLI1Q01543 452 aaPredicted RBP12.82□□□□□ -0.36
PARVB-204ENST00000406477 ADIRFQ15847 76 aa12.82□□□□□ -0.36
PARVB-204ENST00000406477 FAM120AOSQ5T036 256 aa12.82□□□□□ -0.36
PARVB-204ENST00000406477 S100A7AQ86SG5 101 aa12.82□□□□□ -0.36
PARVB-204ENST00000406477 PIP4P2Q8N4L2 257 aa12.82□□□□□ -0.36
PARVB-204ENST00000406477 ZNF48Q96MX3 618 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms